Empidonax traillii (willow flycatcher): 114065346
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Entry
114065346 CDS
T05887
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114065346 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114065346 (SPAST)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
114065346 (SPAST)
Membrane trafficking [BR:
etl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
114065346 (SPAST)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
114065346 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RuvB_N
TIP49
MIT
AAA_22
AAA_5
Mg_chelatase
AAA_14
AAA_16
IstB_IS21
NPHP3_N
AAA_24
nSTAND3
DUF815
AAA_2
Motif
Other DBs
NCBI-GeneID:
114065346
NCBI-ProteinID:
XP_027754969
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MNSPGGRGKKKGSAGSSSSPPAAGASPSAPPGPAPPVPPAGAATAAASPHKRNLYYFSYP
LFAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGDAPEPGGAPETVRACHKR
AFECISMALRIDEDETGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKTGSTGLSGHHRTPSYSGISSSSVSRPAPNSAASTHKAAPKNSRTNKPST
PTPAPRKKKDMKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSL
RPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLV
RALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIAFDG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggccgagggaagaagaagggctcagccggctccagctcctcgcct
ccggccgccggcgcctctccctccgcgccgcccgggccggcgccccccgtgccgccggcg
ggggcggcgacggcagcggcgtccccgcacaagcggaacctgtactacttctcgtacccg
ctcttcgccgccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcc
tggctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggg
gccggcgacgcgcccgagcccggcggggcgcccgagaccgtgcgggcgtgtcacaagcgg
gccttcgagtgcatctccatggcgctgcgcatcgacgaggacgagacaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggctcgacgtctccagtctaaaatgatgaca
aatttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggatcccttaacacacacaagt
aattcacttcctcgttcaaaaactgttgcaaaaaccggatccacaggcctttcaggtcac
catagaacgcccagctacagtgggatatcgtcatcttctgtgtctagaccagcacctaat
tctgcagcttcaactcacaaggctgctcctaaaaacagcagaacaaataagccttctact
cctacccctgctcctcgaaaaaagaaagacatgaagatatttagaaatgtggacagtaat
cttgctaaccttatcttgaatgaagttgttgatagtgggccagctgtcaaatttgatgat
atcgcagggcaggaattggctaaacaagctttgcaagaaattgttatccttccttctctt
agacctgagttatttacaggtctaagagctcctgcccgtggtttattgctgttcggccca
ccaggaaacgggaagacaatgttggccaaagcagttgctgcagagtcaaatgctactttc
tttaatataagtgcagcgagcctaacttcaaaatacgttggcgaaggggagaagctggtg
cgtgctctatttgctgtagccagagaacttcagccttctataatttttattgatgaagtt
gatagccttctatgtgaaagacgagaaggtgaacacgatgctagcaggcgtttaaaaaca
gaatttttaatagcatttgatggt
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