Empidonax traillii (willow flycatcher): 114065478
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Entry
114065478 CDS
T05887
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114065478 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114065478 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114065478 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
etl03029
]
114065478 (RB1CC1)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114065478 (RB1CC1)
Membrane trafficking [BR:
etl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
114065478 (RB1CC1)
Mitochondrial biogenesis [BR:
etl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114065478 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
114065478
NCBI-ProteinID:
XP_027755229
LinkDB
All DBs
Position
Unknown
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIDDIKLKLTQLGSAVSIMAKIPLLECLTRHSYRECLGRLDSSAEHGGTESDETEDGKSA
ELVLSPDISKVNNKSMLASFCKSVEHSALEGTDPENAKEDKESGQNATVQDSETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSLCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLNVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQTKNDEFAMVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENQHRLEQMQESHEVVMQEKQQQVEELQLKISDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQIDKETESLKKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTLLHKKTAEAEKRLSEQITELQSKLELEASALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLTCEKEDAVQTACKELELQR
EAAEKGLLEKIQQLEMQVNRSPPAESSAESTLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYSAAASEACGACAADVPADTDRLVSDFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacgtttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagttctggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaatccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacggtagcatcacgaacacaa
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgccataatggccaacttggaagattgt
acatactcttaccaaaagctgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaagttgaaacttacacagttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacgagacatagttacagagagtgtttaggaagactg
gattcttcagctgagcatggaggaacggaaagtgacgaaactgaggatgggaaatctgct
gaattggtgctttctcctgatatatctaaagtgaacaataaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagaccctgaaaatgcaaaagaagat
aaggaatctggtcaaaatgctactgtccaggacagtgaaacatcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattctatgagcaggcttgatccgagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggacagactctatgcattggaccagatgatagcaagc
tgcagcaggctggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctcatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaagagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcattgcttcgtcttgtaacagaa
ctcctagaaagggtcaaagttgtagaggctctcagtactgttcctcagatgtactgtcta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctctaataaaagatgggaaacacctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactgttcaggaagtcttttctaaggaatcgtttattcagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgagtgacttgcagtttttgcagtctctttgtccttcagaagtacaaccattactcagg
gttcccatactttgtgacttcgaacctcttcaccagcatgtacgtgctctacataacctg
gtaaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagccaagcttcgccacaatctgctaccacaccaaggatggaaagt
acaacaggaaccgcaattgctacctcttcaagaactcctccgtctctcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcatacgtttgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcgttagcagaaagtccagaatctgactttatgtcggca
gtgaatgaatttgtaatagaggaaaatccggtatctcctaatgtaatcagtgacccgcaa
agtccagaaatgatggtggagtctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcaat
gtttgtgtggagaagtgtagggttattgcccaagactccaaggtacatttaagaggcata
aaagaagatctttgccactttagaacacttgtacaaagagaacagtgtgacttttctaat
tctttgaaatgcacttccttagaaatagtaaatacaattgagaaggtaaaactttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacagtctttgaaaagtgaatatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaagattaaaaaatta
aaaggtgacttattaggccttgaggaagttcttcagactaagaatgatgaatttgcaatg
gtaaaaaatgaaaaagaagctgtagtttgcctccagaatgaaaaagaccagaaattactt
gaattagaatgccaaatggagacacagaattctgaaatcaaggaactgaggcagtcacgt
gaaatagtacttgaagacttgaaaaagcttcatgttgaaaacaacgaaaaactacaactc
ctgagggcagaactcgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtgctagctgagcacaaggactgtttggat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagtt
atgcaagagaaacaacaacaagtagaagagttacaactcaagatttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagacattaagatctcagattgataag
gaaacagaaagcttaaaaaaggagatagataaattaaacaataaaatacaaattagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgcatttctgagctagtagatagatatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacacttcttcataaaaaaactgctgaggcagaaaaaagactttcggagcaa
ataacagaactacagagtaagttagagttggaagcgagtgccctagaaaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaagtatgaagcaattatccataagctaaag
gaagagaaagaactgttagtatctaatcaagaacaagacaggcagttgctcattcagaag
ctcacttgtgaaaaagaagatgcagtacaaactgcttgtaaagagcttgaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcgg
agtcctcctgctgaatcatctgctgaatcaactttagttgctgaacttcaagagaagctt
caggaagaaaaaatgaagttcttggagcaacttgaagagcaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgcagaacagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtacttacacaacaacaagaaaaagataaggatttgattgaaacactttctgaagaccga
gctcgcttgcttgaagagaagaagaagcttgaggaagaagttaataaactgagaagtagt
aatttttccccatcaacctactctgcagcagcatcagaagcttgtggagcctgtgcagct
gatgttcccgctgacacagacagactggtttctgactttggggctgaagggagaatggac
tccacaatggaaaccagtatgatggctgtgcatgaaaatgtccatatgtctgaagaaaag
cagaggataatgttgttagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcgtcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgacttggttctcattatcttggacgaaaggcatgac
aactatgtgttgtttactgttagtccaaccttgtatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcaggtgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagatttaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
