Empidonax traillii (willow flycatcher): 114065497
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Entry
114065497 CDS
T05887
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114065497 (MSH4)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114065497 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
ATPase_2
AAA_30
AAA_28
PRESAN
AAA_18
AAA_23
Motif
Other DBs
NCBI-GeneID:
114065497
NCBI-ProteinID:
XP_027755263
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MARSGGREATSATSECFPSRGSSTPIAGGRAERTPRYTLGLLQTPRSSGSTGGSSGGGAR
PGSSSGEGPAPGRAAGSSGAKPAVSDRGESYFGDKSSCVENANTLNLTSSSSVRGLNSTC
IGKTPLSSSRSVCRSHTPLMGYSVTSSSAVSAHSVASVIVAVVEGRGLARGEVGMASIDL
KNPEMILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTTKLFSLITEHFKNVTFT
TVQRKYFNETKGLEYIEQLCASEFSTVFMEVQSKYYCLAAASALLKYVEFIQNSVYAPKS
LKVRFQGSEKTAMIDSSSAQNLELIINNRDSRNGHTLFGILNYTKTPGGSRRLRSNILEP
LVDAETINMRLDCVQELLQDEELFFGLQAVVSKFLDTEQLLSVLVQIPKQDTVKTAESKI
TNLIYLKHTLELVEPLKDALRSCNTQLLKAYYNSLEDARFGIILEKITTVINDDTRYTKG
CLSMRTQKCYAVKPNINEFLDIARKTYTEVVDDIAGMITQLAEKYNLPMKTSFSSARGFF
IQMNADCSTLPNGQLPPEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCK
LLNEIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIA
MEKPVANNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQ
IFTRIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYATC
EYLLNLKAFTLFATHFLELCHMDGLYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYT
EEKNYGLKAAEVSSLPSSIILDAKEITNHIAKQILHRQKSTPEMMKQRAVYHLAMRLVQT
ARNSRLDPDSLRIYLKGLKKKYEASCPAPGETDEEQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggtcgggcgggcgtgaggccacctcggccacctcggagtgcttcccgagccgc
ggctcctccacgccgatcgcgggcgggcgggcggagcggacgccccgctacaccctgggg
ctgctgcagacgccgcgcagctcgggcagcaccggcggctcctcaggcggcggggcgcgg
cccggcagctccagcggggaaggccccgctcccgggcgcgccgccgggagcagcggggcg
aagccggcagtttccgatagaggagaatcatattttggggacaaaagttcttgtgtagaa
aatgctaacacactgaatctcacaagctcttcttctgtgcgaggcctgaatagcacatgt
ataggaaaaacacccctctcctccagtagatctgtttgcagaagccatacccctcttatg
ggatattctgttacatcctcatctgcagtctctgctcatagtgttgcatcagttattgta
gctgtagtagaaggaagaggccttgccagaggtgaagttggaatggccagtattgactta
aaaaatcctgagatgatattatcacaatttgcagacaatacaacttatgccaaggttatt
actaaactcaagattttaacaccactagaaataataatgtcaaacactgcttgtgatgca
gggaacacaacaaaactgttcagtttgattacagagcatttcaagaatgtgacttttaca
actgtccaaagaaaatacttcaatgaaacaaagggtttggaatacatagaacaattgtgt
gcatctgaatttagcaccgttttcatggaggttcagtcaaagtattactgtcttgcagct
gcttcagctttgctaaaatatgttgaatttattcaaaattccgtttatgctcctaaatca
ctcaaggtgcgtttccaggggagtgagaaaacagctatgatagattcatcttcagcacaa
aatcttgaactaataatcaataacagagattctcggaatggtcacacactttttggcatc
ctaaattacactaaaactcctggtggaagtcggagacttagatccaatatcctggaacct
ctagttgatgctgaaacaattaacatgagactggactgtgttcaggaattactccaggat
gaggagctcttttttggtcttcaagcagttgtctcaaaattcctggatacagaacagcta
ctttcagttttggtacaaattccaaagcaggatacagttaaaactgctgaatcaaaaata
accaatttaatctacctgaagcatactttagaacttgtggagcctctgaaagatgcttta
agaagctgtaacacacagctgctaaaggcttattacaattctcttgaagatgcaagattt
ggaattatacttgaaaagattacaactgtaattaatgatgatacaagatacacaaaagga
tgtctgagtatgaggacccagaagtgctatgctgttaagcctaacatcaatgaatttctt
gacatagctcgtaagacatacacagaagttgttgatgacatagcaggtatgataacacaa
cttgcagaaaagtacaacctaccaatgaaaacaagtttcagctctgctcgtggatttttt
atccagatgaatgctgattgttcaacattacccaatggccagcttcccccagaatttaca
aagatcactaaaatgaaaaacacatatagcttcacttcagcggatttaataaaaatgaac
gaaagatgtcaggagtcccttagagaaatatatcacatgacctacttaatagtgtgtaaa
ctactgaatgagatctatgaacacattcattgcctgtacaagctgtctgacattgtgtct
atgctggatatgctgctttcgtttgcccacgcctgcactctttctgattatgttcgtcca
gaatttacggatactttggcaatcaagcagggatggcatcccattcttgaaaagatagct
atggaaaaacctgtggctaacaacacatatctgacagagggcaacaattttgtcattatt
acaggaccaaatatgagtggaaaatcaacatacctaaaacagattgcactctgtcaaatt
atggcacagattggttcttatgtcccagcagagtattgttcttttcgaattgcagagcag
atttttaccagaataggtatggatgatgatatagaaacaaatgcatcaacgttcatgaag
gaaatgaaagagataacgtacatcatacaaaatgctaatgataaatcactgatcataatt
gatgaacttggcagaggtaccagtgctgaagaaggtattggcatttgttatgctacctgt
gaatatctgttgaatttaaaggcatttacactgtttgctacgcatttcctggaactgtgt
catatggatggtttatatcccaatgtggaaaattaccattttgaagtgcaacatgtgaga
agcagtgctgggaataaggagaaaattgcttacacttacacactttctaaaggatacaca
gaggaaaagaactatggattaaaagctgcagaagtttcctccctaccatcatccataatt
ttggatgcaaaggaaatcacgaatcatatcgcaaaacaaattttgcacaggcagaagagc
actcctgagatgatgaaacagagagctgtgtaccatttagcaatgagattggttcagact
gccagaaactctcgattggaccctgacagtttgcgtatatatttaaaaggcctgaagaaa
aagtatgaagccagttgtcctgcgcctggagaaactgatgaggaacagtaa
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