Empidonax traillii (willow flycatcher): 114065595
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Entry
114065595 CDS
T05887
Symbol
SYNPO
Name
(RefSeq) synaptopodin
KO
K21112
synaptopodin
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114065595 (SYNPO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
114065595
NCBI-ProteinID:
XP_027755436
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
RAARGGGTGTGTAGLSRSASLSEKELKEAKARSQRIAAQLTTAPGPSSKGVLLFHRRRQR
IDGLTGAGNGEGLLLSPAPQPRQAAMEEGEAQGMKAEPDQPGNMGERMQVNAPPCQEPPA
EAQQVPLSVYLKENMASAATNGVQELAASGMERGMEGLGNAGAPAGLSMAPLSLPQQPEE
GKNIEVPSEVAGEVPSEVPSAPAGTATGMASPGGQQQNGVQGRQYYEVHLTLAKPKPVKN
RTARPFGTQVSPTSSQPAEEPPAPELPPPPTYAETLSSPPPLTRVRSPPAYSALYPSQEQ
KMLPGPLLGCGESGPNPLPKTGILEESAARRASRKSMFTFVEKPKLGPNPDLLDLVQSAD
SRKKQKDQGEPSAEDEPFALGAEAANFVPNNAARGGHHLPPAEDAPAWSSCLKSPTIQPK
QKPQPSHILSEARGKGAELFARRQSRMEKFIIEAPSQPELLRCPSPTMSLPPSWKYDNNA
YLSPMVSRRPSKSPSRPSKTPPASLYGGNPMENEVSQKELEISKHQPYQLQSSLFILSPS
KGPSRSMPQEMPPPRPSLPDAYPYPQQASCPTSPLPPSPVWHPPVVPSASQTTSSPFPGT
AGALPLTQESRASPGAPAEVLLASPCRLLPPRGKVGFQAPRPSYSTRNAGIEPQDRRSSL
PASPTWTPRLARRPGSLDGWASPASVPELDEGPPMSPPWSERSLSPLRQDADPRASRQMQ
ARLARNIINAARRKSSSPKAVGLEGSRPFTPISTGPPSLPQSPRLGPRAPALQAASSVLG
SLGSPSPTHKSPLRSPRAGSPQFCASPGMPRAAWAEGRRLLLPPSTSSCPVPRLSPVPKS
PLPSPVVGGRSPAKRCTSRSPTDSDVSLDSEDSGTKSPGIHSFNLCPRGWTGSLRLKTGS
LPSGAPCTS
NT seq
2731 nt
NT seq
+upstream
nt +downstream
nt
tcgggctgcgcggggcggcggcaccggcaccggcaccgcgggtctctcccgcagcgccag
cctctcggagaaggagctgaaggaggcgaaggcgcggagccagaggatcgcggcgcagct
caccacggcgcccggccccagctccaagggcgtcctgctcttccaccgccgcaggcagcg
catcgacgggctcacgggggctgggaatggcgaggggctgctgctgagccccgcgcccca
gccccggcaagcggccatggaggagggcgaggcgcaggggatgaaggcagagcctgacca
gcccggcaacatgggagagaggatgcaggtgaatgcacccccgtgccaggagccgcctgc
tgaagcccagcaggtcccactcagcgtctacctgaaggagaacatggcatcggccgccac
caatggcgtgcaggagctggcggccagtgggatggagagagggatggaggggctcgggaa
tgcgggagcccctgcagggctaagcatggcacctctttccctgccacagcaacccgagga
ggggaaaaacatcgaggtgcccagtgaggtggccggtgaggtgcccagtgaggtgcccag
tgcgccagcgggcacagccacagggatggcatccccaggtggccagcagcagaacggggt
gcagggccggcagtactacgaggtccatctcaccctggccaagcccaagcctgtgaagaa
ccggacagccagacccttcggcacccaggtgtcccccaccagcagccagcccgcggagga
accccctgccccagagctgcccccaccccccacctacgcagagaccctcagcagcccccc
acccctcacccgtgtccgctccccccctgcctactcggctctgtacccctctcaggagca
gaagatgctgccaggtccccttctgggctgcggggagagtggaccaaaccccttgcccaa
aacagggatcctggaggagtcggctgcccggagagccagcagaaagtccatgttcacctt
tgtggagaagccaaaactgggtcccaaccccgacctgctggacctggttcagagcgcgga
cagcaggaagaagcagaaagatcagggagagcccagtgctgaagatgagccctttgccct
tggggctgaagctgccaactttgtccccaacaatgcagccagaggtgggcaccacctccc
gccggctgaggatgctccggcgtggtcctcctgcctcaagtctcccaccatccagcccaa
gcagaagccgcagcccagccacatcctcagtgaagcgagagggaagggggctgagctctt
tgcccgccgacagtccaggatggagaagttcatcatcgaggctccctcccagcctgagct
gctgcggtgcccatcgcccaccatgtctctgcctccctcctggaaatacgacaacaatgc
ttacctgtcacccatggtctccagacgcccctccaagagtccctccaggccctccaaaac
cccccctgcgtctctctatggtggcaacccgatggagaatgaggtctcccagaaggagct
ggagatctccaagcaccagccctaccagctccagtcctctctcttcatcctctccccatc
taaggggccatcaaggtcaatgccccaggagatgcctccacccagaccctcccttccaga
tgcctatccctacccccagcaagcctcctgccccacctctccgttgcctccttcccctgt
ttggcatccccccgtggtgcccagcgccagccagaccacctccagccccttccctggcac
tgccggggctctgcccctgactcaggagagccgtgccagccccggagccccggctgaggt
gctcctggcctccccgtgccgcctgctgccgccccgggggaaggtgggcttccaggcacc
ccggccctcctactccaccaggaatgccggcatcgagccgcaggacaggcggtcgtccct
ccctgcatcacccacctggacgccccggctggcgcggcgcccgggcagcctggacggctg
ggccagcccggcctcggtgcccgaactggatgagggacctcccatgtcacctccatggag
cgagaggtccctgtcccctctgcggcaggacgcggacccccgggccagccggcagatgca
agcgcggctcgccaggaacatcatcaacgctgcccgcaggaagagctcctctcccaaagc
cgtggggctggagggctcccggcctttcacccccatctccaccggtccccccagcctgcc
gcagtccccccggctgggccccagagcgccggcactgcaggctgccagcagcgtgctggg
gagcctgggcagcccctcgcccacccacaaaagccccttgcgatctccccgggcaggcag
cccccagttctgtgcctcccccggcatgccccgagccgcctgggcagagggtcgccggct
cctgctgccacccagcacgtcctcgtgccccgtgcccaggctgtcccccgtccccaagag
ccccctgccatcccccgtggtgggcgggcggtccccagccaagcgctgcacctcccggtc
cccgacggactcggacgtctccctcgactccgaagactcggggaccaagagcccgggaat
ccacagcttcaacctctgtccccggggctggaccggcagcctgcggctgaagacggggag
tctgccctcgggggccccctgcacctcctag
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