Empidonax traillii (willow flycatcher): 114065721
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Entry
114065721 CDS
T05887
Symbol
CNGA1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114065721 (CNGA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114065721 (CNGA1)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
114065721 (CNGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
Ion_trans_2
Sec62
Connexin
Ribosomal_S2
SlyX
Presenilin
DUF6474
RNA_pol_Rpc4
CIS_TMP
Zip
Motif
Other DBs
NCBI-GeneID:
114065721
NCBI-ProteinID:
XP_027755641
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MKVGVIETHQSHTIIPSVVVHDTSKDPGLIHREENRYARQRYLPGIFARYNINNNSNKDT
EEKKRKKEKKSKPEKKKDGETEKNKEKKEKNKNKDKSKKKENIEEKKKDVFTIDPAGNIY
YNWLFCITMPVMYNWTMIIARACFDELQHDYLAAWFIIDYVSDAIYVADMFVRTRTGYLE
QGLLVKEEQKLREKYKKSFQFKLDFLSIIPTDLLYFKLGLNYPELRINRLLRVARMFEFF
QRTETRTNYPNIFRISNLVMYIVIIIHWNACVYYSISKAIGFGADTWVYPNTSDPEFARL
TRKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVVDFLVGVLIFATIVGNVGSMISNMNA
ARAEFQARIDAIKQYMHFRNVSKDMEKRVIKWFDYLWTNKKAVDEREVLKYLPDKLRAEI
AINVHLETLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICRKGDIGREMYIIKEGKLA
VVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEAL
TEYPDAKAMLEEKGKQILMKDGLLDIEIANLGSDPKDLEEKVAYMERSMDRLQTKFARLL
AEYDGAQQKLKKRLTRIEKVLKPVIEEEFEALEEADPSTDKPGL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggagtgattgagacccatcagtcccatacaattattccaagcgtggtagtg
cacgacaccagtaaggaccctggactgatacacagagaggaaaacaggtatgccaggcaa
cgatatctacctggtatatttgcacgctacaatattaacaataatagtaataaagacacg
gaagagaaaaaaaggaaaaaagaaaagaagagcaagccagaaaaaaaaaaggatggggaa
acagaaaagaacaaagaaaaaaaggagaaaaataaaaataaagataagtccaagaagaaa
gaaaatatagaagagaagaagaaagatgttttcaccattgatccagcaggaaatatatat
tacaactggttgttctgcatcacaatgcctgtcatgtacaactggaccatgattatcgct
agagcctgttttgatgagcttcagcacgactacttagcagcatggtttattattgattat
gtttctgatgccatttatgttgctgacatgtttgtacggacaaggacaggttacctggag
caaggtcttctggtgaaagaagaacaaaagcttcgagagaaatacaagaaatctttccaa
ttcaaattagattttctgtcaatcataccaactgatctcttatactttaagttaggattg
aattacccagaattaagaataaacagactactcagagtagctcggatgtttgaattcttc
cagcgaacagaaacaaggacaaactacccaaatatcttcaggatctctaaccttgtcatg
tacatcgtgattattattcactggaatgcctgtgtgtactactcgatctcaaaagccatt
ggatttggggctgacacatgggtctaccccaacacctccgatcctgaatttgcccgtctg
actagaaaatatgtttacagtctctactggtcaacactgaccctgactactatcggtgaa
accccccctcctgtaagagattctgagtatttcttcgtggttgttgacttcttggttgga
gtgttgattttcgctaccattgttggtaacgtgggctctatgatctccaacatgaatgct
gccagggcagagtttcaagcacggattgatgctatcaagcagtatatgcactttcggaat
gtgagtaaagacatggaaaaaagagttataaagtggtttgactacctgtggacaaacaaa
aaggctgtggatgaaagggaagtcttgaagtatctgccagataaactaagagcagagatt
gcaatcaatgttcacctggaaactctaaaaaaagttcggatttttgcggactgcgaagct
ggtctgctggttgaactggttttgaaactccagccacaagtatacagtcctggagactat
atttgcagaaaaggagatattggacgagagatgtacattatcaaagaaggcaagctggca
gtagttgctgatgatggaattacccaatttgttgtcctaagtgatggcagctactttgga
gaaatcagcattcttaatatcaaaggtagcaaagctggaaaccgaagaacagccaatatt
aaaagtattggctactcagacttgttttgtctgtctaaagatgatcttatggaggcttta
acagagtatccagatgcaaaggctatgctggaagaaaaaggcaagcaaatcctaatgaaa
gatggattgctggacattgaaattgcaaatttaggaagtgatcctaaagatctcgaagag
aaggttgcctacatggaacgatcgatggacaggttacaaacaaagtttgccaggttgttg
gctgagtatgacggtgcacaacagaaactgaaaaaaagacttacacgaatagagaaagta
ttgaagccagttatagaggaagagtttgaagccttagaagaagcagatccatccacagat
aaacctggattgtga
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