Empidonax traillii (willow flycatcher): 114065807
Help
Entry
114065807 CDS
T05887
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114065807 (PCDH12)
Cell adhesion molecules [BR:
etl04515
]
Cadherins
Protocadherins
114065807 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
114065807
NCBI-ProteinID:
XP_027755779
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MPRTRGCREDSVAMRRRAGRPLAVPRGRRTLGFASSILLLGRSALQLPALWWYLFLCADA
QEVATFTVQYRVLEEVPPGTVIGTLAEHFEGGESGDTAETFQLMETPGRFPLRVGSADGA
LSTAGRVDREQLCRHSDPCWVSFDVLAAQNLALIHVEVEVLDVNDNAPRFPTPELELEMS
ESASLRTRIPLDRALDADAGPNARCSYALSPNEHFVLEVIFSSDGTSHAELVVVKEVDRE
LHSSFDLVLTATDHGEPPKSGTALIKVIVLDSNDNSPVFAESSLTVEVREDALPGTLLVT
VTATDPDQGPNGEIEYSLSKHAPPEVLSTFSIDARTGSIILKHPLDYEETHTYELDVQAR
DLGANPIPAHCKVLVKVLDVNDNAPDVHVTWAARVPVLSEALPKDSFVALVTASDPDSGS
NGQVLCSLSQGDEHFRLKRTNSHSYALMTNAALDRELRAEYNLTLVVRDLGDLSLAVLKH
LTICISDVNDNAPAFERATYEAAVAENSEAPAFLLTVRATDPDLGFNGKVTYSIPDSSAL
GLVSVDPTTGDVFALQAFDYEQVRSLEFLVTAEDGGHPKLASNISVRLTVLDRNDNAPII
TMPVLVGGAATLSVLVSVETGCFWVVPGNRSTPGAAVLTNTTLTSCAGTPFLFSIVARDV
DSGSNGAVRYDLVGGSDAGFFILDPLSGQVFLNASNASSLAGSERELLVRVSDKGDTPLH
TLARLCLVFRHHGAFSKISAQDPGWLSLSWMVVICLAALLGGCLLLLALTLSLRKKEKKD
GMAYNCREAEDAHRQQQLKKPHRQIQKTDIHLIPLLRGRPREVEPPQPCQEDPPGTAPPV
SGSCPQPPLHLTPTLYRTLRNQRTQKDSEEQQGTFELPILQRRPCQPHRPKHLGKEATSP
LDAPTHGKSLVKPPMGQPQLPPEQPVGAGGPGQPQPHQQILRSLVRLSLVALAEQSPTGE
FAMESPPVQQISQLLSLLHQGQFQPKTNYRGNKYTAKNGSRAAGLDTDCQSTKDSGHGES
EAEDRDSDSGFELSVPQLVGEELETLLEPQAELALKRLTAADPTWMARLSFPLTSSYKDN
VFSPDNPHSSQDEEAARQEKPRTFETFGKGAGAASDAAGARLTSTFLSEMSTLFEMILSQ
KVQEHSETGSGLLRQLSARGKGLGLEDRPAAL
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggactcgcggttgccgtgaggactctgtggccatgcggcggcgggcaggcagg
cccctggcagtgccccggggcaggaggacactgggctttgccagcagcatcctcctgctg
ggccgctccgccctgcagctgccggcgctctggtggtacctgttcctgtgtgccgatgcc
caggaggtcgccacgttcacggtgcagtaccgggtgctggaggaggtgccaccagggacg
gtcattgggacactggctgagcacttcgaggggggcgagagcggcgacacagcggagacc
ttccagctgatggagacccccgggaggttcccgctgcgcgtggggagcgcggatggggcg
ctcagcacggctgggcgggtggacagggagcagctgtgccggcacagcgatccctgctgg
gtctcgttcgacgtgctggctgcccagaacctggcgctgatccacgtggaggttgaagtg
ctggatgtcaacgacaatgcgccgcggttccccacgcccgagctggagctggagatgtca
gagagcgcgtccctgcggacacggatcccgctggatcgagccctggatgctgatgccggc
cccaacgcccgctgctcctatgccctctcccccaatgagcactttgttctggaggtcatc
ttcagctccgacgggacgagccatgcggagctcgttgtggttaaagaagtggaccgggag
ctgcactcctccttcgacctcgtgctgacggccactgaccacggggagccaccaaaatca
ggtactgctttaattaaagtcattgtccttgactccaacgacaacagccctgtctttgca
gagagctccttgacagtggaggttcgggaggatgctctgcccgggaccctccttgtgacg
gtcacggccaccgaccccgaccagggccccaacggggagatcgagtacagcctgagcaaa
cacgcgccccccgaggtgctgagcaccttcagcatcgacgcccgcacgggcagcatcatc
ctgaagcaccctctggactacgaggaaacccacacctacgagctggatgtgcaggcccgg
gacctgggtgccaaccccatcccagcacactgcaaggtcctggtcaaagtcctggacgtc
aacgacaacgctcctgacgtccacgtcacctgggccgcgcgggtgcctgtgctctccgaa
gcccttcccaaggacagcttcgtggctctggtgacagccagcgaccctgactcaggaagc
aacgggcaagtgctttgttccctcagccaaggggacgagcacttcaggctgaagaggacc
aacagccacagctacgctctgatgaccaacgctgcgctggacagggagctgcgcgccgag
tacaacctgacgctggtggtgcgggacctgggggacctgtccctggccgtgctcaaacac
ctcaccatctgcatcagcgacgtcaatgacaatgccccagccttcgagagggccacctac
gaggctgccgttgctgagaacagcgaagcacctgccttcctgctcaccgtccgtgccact
gaccccgacctgggcttcaatgggaaagtcacctacagcatcccagactcctctgctttg
ggtttggtctcagttgaccccaccaccggggatgtttttgccctccaggcttttgattac
gagcaggtgaggagcctggagttcctggtgactgcggaggatggaggtcaccccaagctg
gcatccaacatctccgtcaggctgactgtgctcgaccgcaacgacaacgcgcccatcatc
accatgccagtgctggtgggaggtgcagccacgctctctgtcctggtcagtgtggagaca
gggtgcttctgggtggtccctgggaacaggagcaccccaggggctgcagtgctgaccaac
acaacactcacctcgtgtgctggcactcccttcctcttctccatcgtggccagggatgtg
gactccggcagcaacggggctgtccggtatgatctggtgggggggagcgatgctgggttc
ttcatcctggaccctctctcagggcaggtctttctcaatgccagcaatgccagcagcctg
gccggcagcgagcgggagctgctggtccgggtgagtgacaagggggacacccctctgcac
accttggcccggctctgcttggttttccggcatcacggggccttctccaaaatctcagcc
caggaccccgggtggctgagcctgtcctggatggtggttatctgcctggctgctctcctg
ggcgggtgccttctcctcctggctctgaccctgtctctgcggaagaaggagaagaaggat
ggcatggcctacaactgcagggaggcagaggatgcccacaggcagcagcagctcaagaag
ccgcacaggcagatccagaagaccgacatccacctcatcccgctgctccggggccgcccc
agggaggtcgagcccccccagccctgccaggaggatccacctggcacagccccccctgtg
tcagggagctgcccgcagcctcccctccacctcacccccactctctacaggaccctgaga
aatcagaggacccaaaaagactccgaggagcagcaggggaccttcgagctgcccatcctg
cagcgccgtccctgccagccccatagacccaaacatttggggaaggaggccacaagcccc
ctggatgcaccaacgcatggcaagagcctggtgaagccacccatgggacagccccaactg
ccacctgagcagcccgtgggtgctggagggcctgggcagccccagccccaccagcagatc
ctcaggagcctggtccggctgtcgctggtggctctggcagagcagagccccacgggggag
ttcgcgatggagtcgcccccagtgcagcaaatctcgcagctgctctccctgctgcaccag
ggccagttccaacccaaaacaaactacaggggaaacaagtacacggccaagaacggcagc
agggctgcagggctggacactgactgccagagcacgaaggacagcgggcacggcgagagc
gaggccgaggaccgcgactccgacagcggcttcgagctctcggtgccgcagctggtggga
gaggagctggagaccctcctggagccacaggcagagctggccctcaagaggctcacggcc
gcagaccccacgtggatggctcggctctccttccccctcaccagcagctacaaggacaac
gtcttctcccccgacaacccccactcctcccaggatgaggaagctgcaaggcaggagaaa
ccaaggacctttgagacctttggcaaaggtgcaggggctgcctccgacgctgctggggcg
aggctgaccagcaccttcctgtcggagatgagcaccctctttgaaatgattctgtcccag
aaggtccaagagcacagcgagacgggctcggggctgctgcggcagctgtcggcacgtggg
aagggcctggggctggaggacaggcctgctgctctgtag
DBGET
integrated database retrieval system
