Empidonax traillii (willow flycatcher): 114065824
Help
Entry
114065824 CDS
T05887
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
etl
Empidonax traillii (willow flycatcher)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114065824
NCBI-ProteinID:
XP_027755802
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MLPDAVALLVMMVMVVGPRSAVGGGVGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPL
LPMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGMHGQPGPAGPPGFSGIGKPGIPGL
PGKAGMKGMPGAKGEPGMRGEQGPRGLPGPPGLPGPAGLSVNGKPGPQGGPGLPGFRGEP
GPKGEPGPRGERGMKGENGVGKPGLPGPRGNGGPPGPAGPPGPVGVGKPGLDGLPGAPGD
KGDMGPPGGPGVTGEPGPVGPRGPPGIDGIGVPGAAGVPGIQGPMGPKGEPGIRGLPGLP
GPTGYGKPGLPGLKGDRGQPGAQGAIGDKGEPGVDGEPGEPGPAGIIGPPGPPGSMGLPG
KHGLPGSKGDVGPSGPPGMPGMRGDQGPSGFAGKPGVPGERGLPGSVGPPGPTGPKGEPG
FIGLPGVPGLTGGPGPKGDGGIPGQPGLRGPSGIPGLQGPAGPMGPQGLPGLKGEPGLPG
VPGEGKTGEPGMVGPIGPPGMPGTPGLNGPPGPPGPPGPPGAPGVLDETGIAGLHLPDGG
VEGAVLGNGKPGKPQYGRGELAARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNGYNPV
TGIFTCPVSGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELK
ENDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggacgccgtggcactgctggtgatgatggtgatggtggttggccctcgatca
gcagtgggaggcggcgtggggggctacgcccaggtcaagtacatgcagcccatggtgaag
ggacccctgggacccccgttccgcgaaggcaaagggcagtacctggacatgccaccgctg
ctgcccatggacctcaaaggggagccaggaccgccagggaagcctggcccacgtggaccc
cctgggcctcccggctacccaggaaaaccaggcacagggaagccaggaatgcacggccag
cctggccccgctgggcctcccggcttctcgggcattggcaaacccggcatcccaggactc
cccggaaaggcgggtatgaaagggatgcctggagccaagggtgagcccggcatgcgaggg
gagcaagggccaagaggacttcccggccccccagggctgcccgggccagctggactctcc
gtcaatgggaagccgggtccccagggtggccccggcctgcccggctttcggggcgagcct
ggcccgaaaggggagccaggcccccgtggagagcgggggatgaagggtgaaaacggtgta
gggaagcccgggttaccagggccccgggggaatgggggccctcctggccccgcagggccc
cccgggcctgttggcgttgggaagcccggcctggatgggctgccaggagcgccaggggac
aagggtgacatgggccccccaggtgggcctggtgtcaccggggagcccggccctgtgggg
ccacggggccctcctgggatcgatgggatcggggtcccgggcgctgcgggggtgccaggg
atacagggccccatgggaccgaagggagagcccgggatccgaggcctcccaggtctgcca
ggtccaacgggttatgggaagccaggtttgcccggcctgaaaggagaccgtgggcagcca
ggggcacagggagccatcggcgacaagggggaacctggtgtcgatggggagccgggcgag
ccgggccctgccggcatcatcggcccaccaggcccgccgggctccatggggctgccgggc
aagcacgggttgcccgggtccaagggggacgtggggccgagcgggcccccaggaatgccg
gggatgcgtggcgaccagggcccaagtggctttgccgggaagccaggggtgccgggagaa
aggggcctgcccggctcagtgggaccccccggcccgacaggccccaaaggagaaccaggg
ttcatcggtctcccgggggtgcccggattaacgggtggccccgggcccaaaggggatggt
gggatcccaggacagccagggctgaggggcccctcaggcatcccaggattgcaagggccc
gcaggtcccatggggcctcaagggttaccagggctgaaaggggagcccgggctccccggc
gttcctggcgaggggaagactggcgagcccggaatggtcggacccattgggccgcccgga
atgccgggaacgccggggctgaacgggccaccgggcccaccggggccgcctgggccaccg
ggagcgccgggggtgctggacgagacgggcatcgcggggctgcacctgccggacggcggc
gtggagggcgccgtgctgggcaacggcaagccgggcaagccgcagtacggccggggggag
ctcgccgcccgcatcgcgcccgccttcaccgccatcctcacctcccccttccccgcctcc
ggcatgcccgtcaagtttgaccggaccttgtacaacgggcacaacggttacaacccggtc
accgggatcttcacctgccccgtatccggaatctactacttcgcctatcacgtgcacgtc
aaagggaccaacgtctgggtggccctgtacaagaacaacgtgccggccacctacacctac
gacgagtacaaaaaggggtacctggaccaggcctcgggcagtgccgtgcttgaactcaag
gagaacgaccaggtgtgggtacaaatgccctcggaccaggccaacgggctgtactccacg
gaatacatccactcctccttctccgggttcctgctctgccccacataa
DBGET
integrated database retrieval system