Empidonax traillii (willow flycatcher): 114065843
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Entry
114065843 CDS
T05887
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114065843 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114065843 (SFPQ)
03041 Spliceosome [BR:
etl03041
]
114065843 (SFPQ)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114065843 (SFPQ)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114065843 (SFPQ)
Spliceosome [BR:
etl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114065843 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
114065843
NCBI-ProteinID:
XP_027755837
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMAGGPQGPGGPPG
GGPKPEPPKPPTSTSAPPSSSSSAAATTAGPTGSQAGAPPSSALPAGQQPQQQPPVSAPS
SSPSGPQPQSKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPHKGGPGHRGGPGGEPR
GRGQQHQGQQSLGAQQGAGERSEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEF
EYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMDPRER
DMRMGGAATMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMRPERFG
QGGAGPVGGQGPRGMGPGTPAGYGRGREEYEAPNKKPRF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcgcttccgtagccgtggcggcggaggcggtggctttcaccggcgcggc
ggtggcggcggccgcggcggccccaaccacgatttccgctcgccgccgcccggcatgggt
atggggcagaaccgcggccctatggcgggcggcccgcagggcccgggcggcccgccgggc
ggcggcccgaagcccgaaccgccgaagccgcccacgtccacctctgctccgccttcttcg
tcttcttcagctgccgccaccacggcgggacccaccgggagccaggcgggagcgcctcca
tcctccgcgctgcccgcggggcagcagccgcagcagcagccgccggtgtcggcgccgtcc
tcgtctccgtccggcccgcagccgcagtccaagcccagccccagccccacgccggccggc
ggccctaagaaaggacaaggacagtctcccggcggcggccccaaggggccgggcggaccg
cagcaggggccgcacaagggcggcccggggcaccgcggcgggccgggcggggagccgcgg
ggccgcgggcagcagcaccaaggccagcagagcctcggggcgcagcagggcgcaggggag
aggagcgagaagctctcggacgaggggtttaaagcgaacctctctctcctgaggcggcct
ggggagaagacttacacacagcgctgcaggttgtttgttgggaatttgcccgctgatatc
acagacgaagactttaaaagactgttcgccaaatatggggagccaggagaggtttttatc
aacaagggcaaaggctttggattcattaaattggaatccagggctctggcagaaatcgcg
aaggcagagctggacgataccccgatgcggggccggcagctccgcgttcgctttgccaca
cacgccgctgccctgtcggtgcggaacctctctccctacgtgtccaacgagttgctggag
gaagctttttcccagttcgggccagtggaaagagcggttgtgattgtagatgatcgaggt
cgatcaacaggaaaaggcattgttgagtttgcatcaaagccagctgccaggaaagccttt
gaacggtgtactgagggggtgtttttgttgacaaccactcccaggccagttattgtggaa
ccattggaacaattggatgatgaagatggtcttccagaaaagcttgctcagaagaatcca
atgtatcaaaaggaaagagagactcctccccgttttgctcaacctggcagttttgaattt
gaatattcccagagatggaaatctttagatgaaatggaaaagcaacagagagagcaagtg
gcaaaaaacatgaaagatgccaaggacaaacttgaaagtgagatggaagatgcttatcac
gagcaccaggcaaacctcttgcgtcaagacctcatgaggcgccaggaggaactgaggcgt
atggaggaactccataatcaggaaatgcagaaacgcaaggagattcagctgaggcaggag
gaggagcgccgccggcgggaagaggagatgatgatccgccagcgggagatggaagagcag
atgagaagacagagggaagagaattatagtagaatgggttacatggatccaagggagcga
gacatgagaatgggtggtgctgccacaatgaacatgggagatccttatgcttcagcagcc
cagaaattcccacctctgggaggtggtggcggcataggttatgaagctaatccaggagtt
ggccaagcagccatgagtggttctatgatgggaagtgacatgcgtcctgaacgctttggg
cagggaggtgcggggcccgtgggtggccagggtcctagaggaatggggcctggaacacca
gcaggatatggtagagggagagaagaatatgaagccccaaacaaaaagccccgattttag
DBGET
integrated database retrieval system
