Empidonax traillii (willow flycatcher): 114065853 Help Entry 114065853         CDS       T05887                                  Symbol HIF1A Name (RefSeq) hypoxia-inducible factor 1-alpha   KO K08268   hypoxia-inducible factor 1 alpha Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04137   Mitophagy - animal etl04140   Autophagy - animal etl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:etl00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     114065853 (HIF1A)    04137 Mitophagy - animal     114065853 (HIF1A)    04148 Efferocytosis     114065853 (HIF1A)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:etl03000]     114065853 (HIF1A) Transcription factors [BR:etl03000]  Eukaryotic type   Basic helix-loop-helix (bHLH)    Factors with PAS domain     114065853 (HIF1A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 HLH Motif Other DBs NCBI-GeneID:  114065853 NCBI-ProteinID:  XP_027755848 LinkDB All DBs Position Unknown AA seq 811 aa AA seqDB search MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM RLTISYLRMRKLLDSGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM LKPVESPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVLKLEPNT EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMANEFKLELVEKLFAI DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSSQSAATITIFQQT QTPPSPAEEVKPAAERADDVKTIIVPSSPVHVGSETSSAPASPYGGNRSRTASPIRAGKG TVDQTEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIG SLFQQTGDRGGNASLAWKRVKGCKTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQL TSYDCEVNAPIQGNRNLLQGEELLRALDQVN NT seq 2436 nt NT seq  +upstreamnt  +downstreamnt atggacagccccggcggcgtcaccgacaagaagaggattagctctgaacgcagaaaagag aagtccagggatgcagcccggtgccgaaggagcaaggagtcggaggtgttctatgaactg gctcaccagctgcctctgccccacaccgtgagcgcacacctggacaaggcgtccatcatg aggctcaccatcagctacctgcgcatgaggaagctgctggattctggtgagctggagact gaagccaaaatggagaaggaactgaactgtttctacttgaaggctcttgatggatttgtc atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgcatg ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccatgtgac catgaagagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag caaaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga acagtgaatataaagtctgctacgtggaaggtgctgcactgcactgggcacatccgtgtg tacgacacgtgtggtaaccaaactcactgcggctacaaaaagcctcccatgacgtgtctg gtgttgatctgtgaacctattcctcatccgtcaaacattgaggtccccttggacagtaaa acgttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca gagttgatggggtatgagccagaggagctcctgggccgctcaatctatgagtactatcac gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaggggcaggtg acaacagggcagtacagaatgctggcaaaacaaggtggctatgtctgggttgaaactcaa gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtaaactat gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg ctgaaaccagtggagtctcctgatatgaaaatgaccaaaatattcagtaaagatgacctg gatgataccaacagcctctttgaaaaacttaaacaggaaccagatgctttaactgtgctg gccccagctgctggagacaccattatctctctagatttcagcagtaatgagtctgatgaa caacaatgtgatgaagttcctttgtataatgatgtaatgctcccctcatccagtgagaaa ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt cgtagcaatgctgatcctgcactcaatagagaagttgtattaaagctggagccaaacaca gagccactcgaactttcttttaccatgcctcaggtgcaagagcaaccaaccagcccttct gatgcaagtaccagccaaagttcacctgagcccagtagtcccaacgactactgctttgac gtggataatgatatggcgaatgaattcaaactggaattagtggagaaactctttgccata gatacagaagcaaaaaatcccttctcgactcaggaaaccgatttagatttggagatgttg gctccttacatcccgatggatgatgacttccagctgcgatcctttgatcagctctctccg ctggaaagcagctcttccagctctcagagtgcagccaccattaccatatttcagcagacc cagacgccgccaagtcctgctgaggaggtaaaaccggcggcggaacgtgcggacgatgtg aagacgataatcgtcccttcgtctcctgtgcacgtgggcagcgaaacgagtagtgccccg gcgtcaccttacggtgggaacaggagtcgaaccgcctctcccatcagagcagggaaagga acagtggatcagacggaaaaaccttctccaggagcacccagcttgctaacagtcactctg aataaaagatctactgcactggatgaagaactaaatccaaagatgctagctttgcataat gctcagagaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattggg tctttattccagcagacaggagaccgtggaggaaatgcatcacttgcttggaaacgtgta aagggatgcaaaacaaatggtcataatggagtggagcaaaagacaatcattctgctatca actgacatagcaagtaaacttctagggcagtcgatggatgagagtggactcccccaactc acgagttacgactgcgaagtaaacgctcccatacaaggcaacagaaacctgctacagggg gaagaactgctcagagctctggatcaagttaactga

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