Empidonax traillii (willow flycatcher): 114065956
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Entry
114065956 CDS
T05887
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03440
Homologous recombination
etl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114065956 (TOP3A)
03460 Fanconi anemia pathway
114065956 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etl03032
]
114065956 (TOP3A)
03400 DNA repair and recombination proteins [BR:
etl03400
]
114065956 (TOP3A)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
114065956 (TOP3A)
DNA replication proteins [BR:
etl03032
]
Eukaryotic type
DNA Topoisomerases
114065956 (TOP3A)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
114065956 (TOP3A)
FA (Fanconi anemia) pathway
114065956 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
114065956
NCBI-ProteinID:
XP_027756060
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MIVQARLLARGRMLPQPWRLFSRAAEDGALRRIRRVLCVAEKNDAARGIADLLSNSRMRR
REGFSKFNKIYEYDYQMFGQTVTMVMTSVSGHLLTHEFKMPFRKWHSCNPLALFDAEIEK
YCPENYLDIKKTLEREIRQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLQVFRARFSE
ITLHAVRSACENLTQPDQRTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLIS
YGSCQFPTLGFVVERFKAIQAFVPEAFYKIKVTHDHEDGSVLFNWKRNRLFNHTACLVLY
QMCMEDPVATVVEVASKPKSKWRPLPLDTVELEKLASRKLKINAKETMTIAEKLYTKGFI
SYPRTETNIFPKELNLSALVQQQTQDPNWGAFAQRILDQGGPTPRSGTKSDQAHPPIHPT
KYTANLQGNEQRLYEFIVRHFLACCSQDAKGQETTVEIDIANERFIAQGLMILARNYLEV
YPYDKWSDKVIPVYQKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAE
HIETIKTRMYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKSVVLQQQVQKYKEVFIEAVARANKLDEALAQYFGEAAEIPEQDEVYPAMPVSVRKCPQ
CNNDMVLKTRKNGGFYLSCMGYPACKTAVWFPDFVLDVTRDESICDVCKPHPVHRLKFKF
KRGSVPPVMPLEFVGCIGGCDEMLRELLDLKYLHRPSQPVSSAAQPPQHLQDNHSLNRSG
GENRQGRGTTNPARGHLLSLNISNRTSRDAAPAAAEAGSDAVVCNCGSEALLLTVRKDGP
NRGRRFYKCGSGSCNFFLWADDQAEDAAAPWGSALPQPAAGRAPGGGRAPEPSGSGGAAV
CRCDQPAVTRTVNKDGPNKGRQFHTCPKPREQQCGFFQWADENVAPGPSGDVSWNNFGSS
EHSRGLGSKAKRPGSFSSGSTAKKPRTCSICHQPGHTRKNCPQNH
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgcaggccaggctgttggccaggggcaggatgctgccccagccctggcgcctc
ttctcccgggccgccgaggacggggcactccggaggatccgcagggtgctgtgcgtggct
gagaagaacgacgctgcccgagggatcgccgatctgctctccaacagcaggatgcggcgg
agagaagggttttccaagttcaacaagatctacgaatacgactaccagatgtttggccag
accgttaccatggtgatgacatccgtgtcaggacacttactgactcacgagtttaagatg
ccatttcgcaaatggcatagctgcaaccctttagctctttttgatgctgaaattgagaag
tattgccctgaaaattacctggatatcaagaaaacccttgagcgagaaatccggcagtgc
caagccctggtgatctggactgactgcgatcgggagggggagaacatcggcttcgagatc
atccacgtgtgcaaagcggtcaagccaaacctccaggttttccgagcccgtttctcggag
atcacccttcatgccgtcaggtcagcctgcgagaacctcacccagccggaccagaggacg
agcgacgccgtcgacgtcaggcaggagctggacctcaggataggtgctgccttcaccagg
ttccagacgctgaggctgcggaagatcttccccgatattttagcagatcagctgatcagc
tacggtagctgccagttcccaacgctgggatttgtagttgaacgcttcaaagccatccaa
gcctttgttcctgaagccttctacaaaattaaagtgacccacgaccacgaagacggcagt
gtgctcttcaactggaagaggaaccggctcttcaaccacacagcgtgcctggtcctttac
caaatgtgtatggaggatccggtggcgactgttgttgaggtggcgagcaagccaaagagc
aaatggaggcccctgcccctggatactgtggaactcgagaagttggcgtcccgcaaactg
aaaataaacgcaaaggaaaccatgacaatagcagaaaaactctacactaaagggttcatt
agctacccccgaactgagaccaacattttccccaaggagctgaacctctcagccttggta
caacagcaaacacaggacccaaactggggagcatttgcacagaggattttggatcagggt
gggccaacccctcggagtggaaccaaatccgatcaggctcatcctcccattcaccccacc
aaatacaccgctaacctgcagggcaacgagcagagactctacgagttcatcgtgcgccat
tttttggcttgctgctctcaagatgccaaggggcaggaaacaactgtggagatcgacatt
gccaacgagcgattcattgctcagggactgatgatcctggcccgaaattacctggaagtc
tatccttacgacaagtggagcgataaggtcatcccagtgtatcagaaagggtctcgcttt
cagcccaccacggtggagatggtggatggggaaaccagccctccattgctcctcacggaa
gcagatctcattgctctcatggagaaacatggcattgggaccgacgccactcacgccgag
cacatcgagacgatcaagacgcggatgtacgtgggccttacagcggatcagcggttcctg
cccggccacctgggcatggggctggtggaaggctatgattccatgggctacgagatgtcc
aagcctgacctccgggctgagctggaggctgatctaaaactgatctgcgaggggaagaaa
gacaaatctgtagtgttgcaacagcaggtccaaaagtacaaggaagtcttcattgaagcc
gtggccagagccaacaagttggatgaggccctggctcagtactttggagaagctgcagaa
attccagagcaggatgaggtgtacccagcaatgcccgtttccgttcggaagtgtccgcag
tgcaacaacgacatggtcctgaagaccaggaagaatggcgggttctacctgagctgcatg
ggctatccagcctgtaaaactgcagtctggttccctgattttgtgctggatgtgaccagg
gacgagagcatatgtgatgtgtgtaaaccccatccagttcacagactgaagtttaaattc
aagagaggcagcgtcccgcccgtgatgcccctggagttcgttggctgcattggaggctgc
gatgagatgctgagggagctcttggacctcaagtacctgcacagaccatcccagcccgtg
tcatcagccgcccagccaccacagcacctgcaggacaaccactctttgaacagatccggc
ggcgagaacaggcaggggagggggaccacgaacccggctcggggacacctgctctccctg
aacatctccaacagaacatcccgggacgccgctccggcggcggcggaggccgggagcgac
gccgtggtgtgtaactgcggcagcgaggcgctgctgctcaccgtgcgcaaggacgggccc
aaccgcggccgccgcttctacaagtgcggctccggctcctgcaacttcttcctgtgggcc
gacgaccaggccgaggacgccgcggctccgtggggctctgcgctcccccagcccgcggca
gggagggccccgggaggagggagagccccggagccgtcggggagcggcggtgccgcggtg
tgccggtgcgaccagccggccgtgacgcgcaccgtgaacaaggatgggcccaacaagggc
cggcagttccacacctgccccaagccccgggagcagcagtgcggcttcttccagtgggca
gatgagaacgtggcaccaggcccttctggagatgtctcttggaacaactttggcagcagt
gaacactcaagagggttgggaagcaaagccaagagaccaggcagcttctcctcaggatcc
actgccaagaaaccacggacctgtagcatttgccaccagcctgggcacacgaggaaaaac
tgccctcagaaccactga
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integrated database retrieval system
