Empidonax traillii (willow flycatcher): 114065969
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Entry
114065969 CDS
T05887
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114065969 (RAI1)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
114065969 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
114065969
NCBI-ProteinID:
XP_027756094
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
MQSFRERCGFHGNQQSYQPTSQDTSRLENYRHQSQAGPNCERQRLVAKEYYSQQQLPYAG
YENSAVEKYHRGNKQLAGQQLQGRPAFSNYTVQENSPYPARYSGDESLQAWGGQPQALPG
GVAKYEDSLMKKTAALAGGRPYHEPAAASLPFRTHFQQQQQPQQQQQQQQPPALPYPKLQ
RQKLPNDVSSPMPFSQSPHFGQHSQSFPASSTYSSVPGGSQPAHSYKSCTAPSGQPPLER
PLGSAASLAPGPRVPNLHGYQPNRIGYEQPPQPPPQPPQPPPPQPPQPPQPPQPPQPLQG
RHHTSESLHYQNLAKYQHYNQPGQTYCQSDATPVRTPEQYYQTFSPSASHSPARSVGRSP
SYSSTPSPLMPNLENFQYSQQPLSTGAFPAGIADHSHFMPLLNPSPTDGTSPDAQSGNCK
NLQKEKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGIKTPARTPEQL
KGQHCSPESSTYSAEQVGTPLSDPLSTPQSVHAETQDTDYLSGSEDQLERSFLYCNQNRS
PARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSIHATLPLETFTKYVTNERDCPRLL
LSALSQEELASEIIVLQDAINEKADKAWANLPMLSKEASKSPFQLENHRPSLDSMVKGTW
PSQGDSSTLTEPLKMDKASGASAGKDFGEEVYEGPQVEFTATETKDVLKDTAPLAFNSKP
SIPAATSSAGATDYSCYSNTTANSVGSENAMENFEWPEESLGEACLRWKELQATDLPKGL
FPSKLVSSCKEKKNACGLDLCDGEQPAKSEPAQDFGEQVMGEEEETLTYDEATKADSERW
LQDTRHCCSAGDFSEIPIISSPDLKESDLEAEEYSSLCELAGSEQKSVTYDASPPKPPEM
PAVLSSSEVPVSAEETVSAVEKEGSAPTPRLSGQSVILLGPAVGTETKVKSWFKSSLPHI
QSEEESGGGETSHLEAADAESASSVTIKQQLTPPENVLGKMEPVSRGKSLRNKRVHCRLP
EGDNPGSAVLTPFDELPAAGGVAGACLGPDGQTEVPSKSAQSQTPRFPAEGLPARMCTRS
FTALAEPRAPAPLEGLKAPTHQEKLGKKPGCGVKQRVAFKARKRSSRPAPRVVQNTSDAT
LLMPGLVAAEEVAGPTPLEGDAVEAGERDQRSMILRSRTKTQEVFYTKRQRGKRAADVRL
KNCKAPKKLISNNHLPPAFKLAAPGSPHKESKVGARMKLPKAGPGVGGKMSERPLHSLKR
KSTFISPIPTKKRNLVLRSNSGGVKEEKPEGPPSLFKKMPVAKKVKAKLPPKSSGEAVLK
PTLPKEAPDVCIKITSRAAFQEATKTKVLPPRKGRGLKLEAIVQKITSPNLKKFSCKPAA
TAAVAAVTAYGSSLSPTGVERERVVKHSGVAAVVGDMRLPKPVAAQKVPTMPVAEPLCRN
PNGRAPKGKPGGGKKLSPDSCQGDACGPTSGAQSSPTMGAKNLGLLPKKRNRKGKAAALG
MAKAPLGPAPPLLPRERVANPGGGEEAPREKKPKTEEKEAGASDGPPEGRSAAGPARGPK
PRANHSNYNGYSKRQRKRLGHGKAKAVPARCKSRGKRRRQSQQAPLVHPAEPEIRLKYIS
CKRLRADSRAPPFAPYVHVERRGEFTTTCTIINSPGDEARLQRGPAGPAPRPRAALPASS
TMHMGPVVSKALSAACLVCCLCRNPANYKDLGDLCGPYYPEDCLPKKKSRLKEKARVEGP
GEDSTAPAVAERVPRGMEGGCGKAARPEGAAEAAKQSALRSSPRGMFRRLQSCYCCDERT
EGEEAAEKPRRHECHKAESPPQEPAGDTQEHWLHEACAVWTAGVFLVAGKLYGLQEAVKA
AADLKCSSCQQVGATVGCCQKGCPHTYHYACAVDTGCLLTEESFSLRCPKHKRQPV
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgagaaaggtgtggtttccatggcaaccagcagagctaccagccgact
tcacaagatacatcacgcctggagaattacaggcatcaaagtcaggcagggccgaactgc
gagcggcagaggctggtggcgaaggagtactacagtcagcagcagctgccgtacgcgggc
tacgagaacagcgccgtggagaaataccaccggggaaacaagcaattagcggggcagcag
ctgcagggcaggccggccttttccaattacaccgtgcaggagaacagcccttatccggcc
cggtattccggggacgagagcctgcaggcgtggggtggccagccacaggcgctgccgggt
ggtgtagccaagtatgaggacagcctgatgaagaagacggcggcgttggcaggtgggcgg
ccgtaccacgagccggcggccgcctcgctgcccttccggactcacttccagcagcagcag
cagccgcagcagcagcagcagcagcagcagccgcccgcactcccctaccccaagctgcag
cggcagaagctgcccaacgacgtctcctcgcccatgcccttctcgcagagccctcacttc
gggcagcactctcagtccttccctgcctcctccacctactcctcggtgccggggggcagc
cagccggcacactcctacaagagctgcacggcgccctcggggcagccaccgctggagcgg
cccctgggcagcgccgccagcctggctcccggcccccgcgtgcccaacctgcacggctac
cagcccaaccgcatcggctacgagcagcccccacagccgccaccgcagcccccgcagcca
ccgccgccacagccccctcagccaccgcagcccccgcagccgccacagcccttgcagggg
cggcatcacacctcggagtccctccactaccaaaacctggccaagtaccaacattacaac
cagccgggccagacctactgccagagcgacgcgacgcccgtccggacgcccgaacagtac
taccagaccttcagccccagcgccagccactcgccagctcgctccgtcggcaggtcccca
tcctacagctccaccccctccccgctgatgcccaacctggagaacttccaatacagccag
cagccgctgagcaccggcgctttcccagccggcattgccgaccacagccatttcatgccg
ctgctgaacccttctcccaccgatgggacgagccctgacgctcaatctgggaactgtaaa
aacttgcagaaggagaagctgccggaaaacttgctgtcagacctgagcctgcagagcctg
acagcactcacctcccaggtggagaacatctccaacactgtccagcagctgctgctctcc
aaagcggccgtgccccagaaaaagggcatcaagaccccggcgaggacccctgagcagctc
aaggggcagcactgcagccccgagagcagcacctactcggcagagcaggtggggactccc
ctgtctgaccctctgagcacgccccagtcagtccatgccgagacacaggacactgactat
ctcagtgggtcggaggatcagctggagaggagtttcctgtactgcaaccagaaccgcagc
cctgcccgagtcaacagcaattccaaggcgaagcccgagtcggtgtccacctgctccgtg
acctccccagacgacatgtccaccaaatcggacgactccttccagagcatccacgccacc
ctgcccctggagaccttcaccaagtatgtgaccaacgaacgggactgtccccggctgctc
ctcagcgccctgtcccaggaggagctggcttccgagatcatcgtcctgcaagacgccatc
aacgagaaggcggacaaagcctgggccaacttgcccatgctgagcaaggaggccagcaaa
tcccccttccagctggagaaccaccggcccagcctggactccatggtgaagggcacctgg
cccagtcagggtgactccagcacactcactgagcccctcaagatggacaaagcttcaggg
gccagtgcagggaaggactttggtgaggaggtatatgagggtccccaggtggagttcacg
gccactgaaaccaaggatgtgctgaaggacactgccccactggccttcaactccaagccc
agcatcccagcagcgacatcgagcgcaggagccactgactacagctgctactcgaacacc
accgccaactcggtggggtctgagaatgccatggagaacttcgagtggccggaggagagc
ctgggcgaggcatgcctgcgctggaaggagctccaggccactgacctccccaagggcttg
ttccccagcaaactggtgagctcctgcaaggagaaaaaaaacgcctgcggcttggatctg
tgcgacggagagcagccagccaagagcgagccggcccaggacttcggggagcaggtgatg
ggggaagaggaggagacgctgacctacgatgaagcaacaaaggcagacagcgagaggtgg
ctgcaggacacccggcactgctgctcagccggggacttcagcgagattcccatcatctcc
tcgccggatctgaaggagtcagacctggaggcagaagagtactcctcgctctgtgagctg
gccggctcggagcagaagtcggtgacatacgatgcctcgccacccaaacctccggagatg
ccagccgtgctgtcctccagcgaggtgcccgtgtccgccgaggagaccgtcagcgcggtg
gagaaggagggctcagctcccaccccgcgcctctccggccagtctgtcatcctgctgggc
cctgccgtgggcacggagaccaaggtgaagagctggttcaagtcctcccttccccacatc
cagtccgaggaggagagcggcggaggggaaacatcccatctggaggctgccgatgccgaa
tctgcctcatcagtcacgatcaagcagcaactcaccccccctgaaaacgtgctggggaag
atggagcctgtctcacggggcaagagcctccgcaacaagagggtgcactgccggctgccg
gagggggacaaccccggcagcgccgtgctgaccccgtttgatgagctgccagcggccggc
ggtgtggccggtgcctgcctggggccagatggacagacggaggtaccgagcaagagcgcc
cagagccaaacgccgcggtttccagccgagggcctcccggcgcgcatgtgcacccgctcc
ttcaccgccctcgccgagccccgcgcgccggcccccctggaggggctgaaggcccccacg
caccaggagaagctggggaagaaacccggctgcggcgtgaagcagcgggtggctttcaaa
gccaggaaacgcagcagtcggccggcccccagggtggtccaaaacaccagcgatgccacc
ctcctgatgcccggcttggtggcggcggaggaggtggcagggccgacgccgctggagggg
gatgcggtggaggcgggggagagggaccagcggtcgatgatcctgcgctcccggacgaag
acacaggaggttttctacaccaagcggcagcggggcaagcgggcggccgacgtccggctg
aagaactgcaaggcacccaaaaagctcatatccaacaaccacctcccaccagccttcaag
ctggcggcgccaggcagcccccacaaggagagcaaggtgggtgcccggatgaagctgccc
aaagcagggccaggcgtggggggaaagatgtcagagcggcccctgcactcgctgaagagg
aagtccaccttcatctcccccatccccaccaagaagaggaaccttgtcctgcggagcaac
agtggtggcgtgaaggaggagaagccagagggcccccccagccttttcaaaaagatgcca
gtggccaagaaggtgaaagccaagctgcctccgaagagctctggtgaagctgtcctgaag
cccaccctgccaaaggaggcccctgatgtctgcatcaagatcacctcccgggcagccttc
caggaggccaccaagaccaaagtgctgcctccccgcaagggccgcggcctcaagctggag
gccatcgtccagaagatcacctcgcccaacctgaagaagttctcctgcaaaccggcagcc
acggctgcggtggccgctgtgactgcctacggctcctccctgagcccgactggggtggag
cgggaacgggtggtgaagcacagtggggtggctgcagtggtgggtgacatgaggctgccc
aagccggtggcagcacagaaggtgcccaccatgccggtggctgagccactctgccggaac
cccaacggccgagcaccgaaggggaagccaggcggcgggaagaagctctctcctgacagc
tgccagggcgatgcctgtgggccgacatcaggggcccagtccagccccaccatgggggcc
aagaacctcgggctcctgcccaagaagaggaaccgcaagggcaaagcagcagcgctgggc
atggccaaggcaccgttgggccctgcgccgccgctgctgccccgggagcgcgtggccaac
ccggggggtggggaggaggcaccacgggagaagaaaccaaagactgaggagaaggaggcg
ggggccagcgatggcccccctgagggacgctctgctgctgggccagcgcggggcccaaag
ccgcgggccaaccactccaactacaatggctactccaagcgccagcggaagcgtctgggc
cacggcaaggccaaggcggtgccggcgcggtgcaagagccgcgggaagcggcggcggcag
tcccagcaggccccgctggtgcatcccgccgagcctgagatccggctgaagtacatctcc
tgcaagaggctgcgggcagacagccgggccccccccttcgctccctacgtccacgtggag
cggcgcggggagttcaccaccacctgcaccatcatcaactcgcccggcgacgaggcgcgg
ctgcagcggggaccggcggggccggcgccgcgcccgcgggcagccctgcccgcctcctcc
accatgcacatggggccggtggtgtcgaaggcgctgagcgccgcgtgcctggtctgctgc
ctctgccgcaaccccgccaactacaaggacctgggggacctttgcgggccctactacccc
gaggactgcctgcccaagaagaagtcgcggctgaaggagaaggcgcgggtggaggggccg
ggcgaggacagcaccgcacccgccgtggccgagcgggtgccccgcgggatggagggcggc
tgcgggaaggcggcgcggccggagggtgcagccgaggcggccaagcagagcgcgctgcgc
tccagcccgcggggcatgttccgtaggctgcagagctgctactgctgtgacgagaggaca
gagggcgaggaggcggccgaaaagccccggcggcacgaatgtcacaaggccgagtccccg
ccgcaggagccggcgggcgacacgcaggagcactggctgcacgaggcctgtgccgtatgg
accgctggggttttcctggtggcggggaagctctacgggctgcaggaggctgtcaaggcg
gctgccgacctgaagtgctcgagctgccagcaagtgggagccactgtgggctgctgccag
aaggggtgtccccacacctaccactacgcgtgtgccgtcgacacaggttgcttattaacc
gaggaaagcttctctctgagatgtcccaaacataagaggcagccggtgtag
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