Empidonax traillii (willow flycatcher): 114065997
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Entry
114065997 CDS
T05887
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114065997 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114065997 (DDX5)
03009 Ribosome biogenesis [BR:
etl03009
]
114065997 (DDX5)
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114065997 (DDX5)
Spliceosome [BR:
etl03041
]
Complex A
U1 snRNP components
U1 related factors
114065997 (DDX5)
Complex B
114065997 (DDX5)
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114065997 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
114065997
NCBI-ProteinID:
XP_027756143
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTQQEVEQYRASKEITVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGTKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggacagagggtttggagccccccgttttggaggaagt
agaggtggacctctgtctggaaagaaatttggaaaccctggggaaaaacttacaaaaaag
aaatggaatttagatgagctgcccaaattcgagaagaacttctatcaagaacatcctgat
gtagttagacgtactcagcaagaagttgagcagtacagagcgagcaaagagatcactgtt
aggggccataactgtccaaaaccaattatcaacttttatgaagcaaacttccctgcaaat
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggt
tggcctgttgcgttgagtggattggatatggtcggagtggcacagactggatcagggaaa
actctctcttacttactgcctgccattgtgcatataaatcaccagccattcctggagcga
ggagatggacccatttgccttgtgctggccccgacccgtgagctggcccagcaggtgcag
caggtggctgccgagtacagcagagcgtgccgcttgaagtccacgtgtatctatggagga
gctcccaagggaccacagatccgggacctggagagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctggaaagaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaaccgcagatcagaaaa
attgtggatcagattagacctgacaggcagaccctgatgtggagtgccacatggcccaag
gaagtgaggcagctggctgaagatttcctgaaagaatatgtgcacatcaacattggtgca
ctggaactcagtgcaaaccacaacatcctgcagattgtggatgtgtgtcacgacgtagag
aaagatgacaagctcattcgtttgatggaagaaatcatgagcgagaaggaaaacaaaaca
attgtttttgtggaaaccaaaaggcgttgtgatgatcttaccaggaagatgaggagagat
gggtggccagcgatgggtattcatggtgacaaaagtcagcaggagcgggactgggttcta
aatgaattcaaacatgggaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgctccagctgattgaagacagagggtcaggtcgctcccga
ggggatcgccgtgacagatactcagcgggcaaaaggggtggatttagtagctttagagag
agggagaactttgagagaacctatggtgcgctaggcaagagagacttcggaaccaaaact
cagaacggggcctacagcgcccagagtttcagcaatggaactccctttgggaacggcttt
gcggccgcagggatgcaggctggcttcagggcgggcggtaaccccgcgggagcgtaccag
aacggctacgagcagcagtacggctccaacattgccaacatgcacaatggcatgaaccag
cagcagtacgcctaccctgccactggtgctgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
