KEGG   Empidonax traillii (willow flycatcher): 114066015
Entry
114066015         CDS       T05887                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
etl  Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:etl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114066015 (KDM4A)
Enzymes [BR:etl01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114066015 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114066015 (KDM4A)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114066015 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind 53-BP1_Tudor Tudor_5
Other DBs
NCBI-GeneID: 114066015
NCBI-ProteinID: XP_027756173
LinkDB
Position
Unknown
AA seq 1053 aa
MASDLESLNPGQRIMTFRPTMEQFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKNGKQCAEEMETEETCKEEVDEDEIKSIPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
QYEADVAEPRERPASELVQQGEQRLKLPDRGDSAKLEELKTVKLEEEEEQEAAVLDLSIS
HASNSSSVLPASKQGAASSVQSSSPAYSCSSDSESTELLAKRTLPGPAGVFTVHSYAKGD
ASGSDGEQTPGKKASATASVNEQELTEVAKEYISSAKDSKKSKGRRQPLSKLPRHHPLLV
KDCISDDEAPEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQSPYCAVC
MLFQAYQAECEGSSQNSGVTPAAVDGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEEDGT
SILITCKNCHVCVHASCYGVSPDKATEDWMCSRCSENALEEDCCLCSLRGGALQRANDDK
WVHVMCAVAVLEAKFVNIAERSPVDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHGRC
PTSFHVSCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKHKN
GRFYQCEVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTDGQ
VYGAKFVASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSVASDMRFTEIFE
EKEVSQERKRQRVINSRYREDYIEPALYRAIME
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggcctcggatctggagagcctcaaccccgggcagcgcatcatgaccttccgccccacc
atggagcagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccgggctggccaagatcgtgccgcccaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccccgcgcccatccagcaggtggtgacggggcagtccggg
ctcttcacgcagtacaacatccagaagaaagccatgacggtccgcgagttccgcaggatc
gccaacagcgacaagtactgcactccccggtacacggactttgaagaccttgaacgaaag
tactggaaaaaccttacattcaatgcccccatctacggggccgacgttaacggcacgctc
tacgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctggatattgtg
gagaatgaaagcggcataaccattgaaggagtgaatactccttacctgtattttggcatg
tggaaaacttcctttgcctggcacaccgaggacatggatctctacagtattaactacttg
cattttggggaacccaagtcatggtactcgatccctccagagcatgggaagcgactcgag
agacttgcaaaaggtttctttccaggaagcgcccaaagctgtgaagcatttctccgtcac
aagatgaccctcatctctccatcaattctgaagaaatacggcattccatttgataaggtg
acgcaggaggccggggagttcatgatcacctttccttacagctatcacgctggcttcaat
cacggctttaactgtgctgaatccaccaacttcgctactcttcggtggatcgagtacggg
aagcagtcggtgctgtgctcatgtcggaaggacatggtgaagatttccatggatgtgttt
gtgaggaagtaccagccagaccgttacaagctttggaaggctgggaaggacgtgactgtc
atcgaccatgctcttccaaccccagaggcagcagagttcctgaaaggagatctcatgcag
aaagtcaagaatgggaaacagtgtgctgaggaaatggaaacagaagagacgtgtaaagag
gaggtggatgaggatgagattaaaagcatccccaagcatcgcataggaacaaaaaggcac
agggtctgcctggaggtgcctcaggaggtgagtgagagtgaggccttccccaaggaggag
cagtatgaagcagatgtggcagagcctcgtgagaggcctgcgagtgaacttgtgcagcaa
ggtgaacaaaggctgaagcttccagatcgtggggactcggctaaattggaagaattgaaa
acagtgaagcttgaggaggaggaagaacaagaagcagctgtactggatctctccatttca
catgcttccaattcctcttcagtgctgccagcgtcaaagcagggcgcagcatccagtgtt
cagtccagctcgcctgcgtattcgtgctcctcagactctgaatcgactgagctgttggca
aaacgaactcttcctgggccagctggggtgttcacagtccacagctatgctaaaggggat
gccagcggatccgacggtgaacagactccagggaagaaagccagtgccaccgccagcgtg
aatgagcaagagctgacagaggtagcaaaggagtacatcagctcagcaaaggacagcaag
aagtccaagggtcgtcgccagcccttgagcaaactcccacgccatcacccactcttggtt
aaagactgcattagtgatgatgaggcaccagagcagctaactcctgaagaagaggctgag
gagacagaggcgtgggccaagccccttagccagctctggcagaaccggccacccaacttc
gaggctgagaaagagtacaatcggaccatggctcagcagtctccctactgtgctgtttgt
atgctcttccaggcataccaggcagaatgtgaaggcagcagccaaaactctggagtaact
ccagctgctgtggatgggaagatccgaaccaaacccctgattcctgaaatgtgctttact
gcaactggctgcagcactgacctcaatctttcaactccctacctagaggaagatggaacc
agcatactcatcacctgcaagaactgccacgtctgtgtccatgcaagttgttatggtgta
tcccctgacaaggccacagaagactggatgtgctcccggtgttcagaaaatgccttagaa
gaggattgctgtttgtgttcattacgaggaggagcactacagagagccaacgatgacaag
tgggttcatgtgatgtgtgctgtggctgtactggaggcaaaatttgtgaacattgcagaa
cggagtcctgtagacgttggcaaaatccccctgcaacgtttcagactgaaatgcatcttc
tgcaagaagaggagaaagagaattgcaggttgctgtgtacagtgctcacatggccggtgt
cccacatcctttcatgtcagctgtgcccaagcagcaggagtcatgatgcagcctgatgac
tggccatttgttgtcttcattacctgcttcaggcataagactccatctcaggcagagcga
gccaaggctgcactccaggatctgtcacctggacagattgtcatcagcaagcacaagaat
ggtcgcttctatcagtgtgaagtggtcagccttgcaaaggagactttctacgaggtcaac
tttgatgacggctccttcagtgataacctgtacccagaggacattgtgagtcgagactgt
cttcagttgggtcctcctgctgaaggggaagtcgtgcaggtgagatggacagatggacaa
gtttatggagcaaagtttgtcgcatcacacgccatccagatgtaccaggtggaatttgaa
gatggttcacagctgatggtgaaaagggatgatgtatatactcttgaagaggagcttcct
aagagagtgaaatcaaggctgtcagtagcttcagatatgcgcttcacagagatcttcgaa
gagaaggaggtcagtcaagagaggaagaggcaaagagtgatcaattcacgctaccgtgaa
gattatattgaacctgccttgtaccgggccatcatggagtaa

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