Empidonax traillii (willow flycatcher): 114066020
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Entry
114066020 CDS
T05887
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114066020 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114066020 (U2SURP)
Spliceosome [BR:
etl03041
]
Complex A
U2 snRNP components
U2 related factors
114066020 (U2SURP)
Complex B
114066020 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
114066020
NCBI-ProteinID:
XP_027756197
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MADKAPGGSQRPAGKGRGPDAVHTTGSADSHPLMESKLKAFSIGKMSAAKRTLSKKEQEE
LKKKEDEKAAAEIYEEFLAAFEGGDGGKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSR
FSDQKNQPSQPSNEKPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHK
TKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINP
QMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMI
MSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPK
NKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLF
ENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEA
FVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSI
LKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQS
ENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEEL
DGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTTEDSKKNEPIFKVAPSKWEA
VDESELEAQAVTTSKWELFDQHEESEEEEIQNQEEESEDEEDTQSSKSEEQHMYSNPIKE
EMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKL
LQREKEKEMERERDRDKKDKEKSETRSKEKKEKEESTPTRKERKRRHSASPSPSRSSGSR
RAKSPSPKSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKK
SGKKSRSQSRSPHRSHKKSKKSKH
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggcgcccggcggctcccagagacccgccgggaagggcagagggccagat
gcagtacacaccactggatctgctgattcacatcctctaatggaaagtaaacttaaagcc
ttcagcattggcaagatgagtgctgccaaaaggactctgagcaagaaggaacaagaagaa
ttgaaaaagaaggaggatgagaaggctgctgcagaaatttatgaagaattcctggctgcc
ttcgaaggaggtgatggtgggaaagtgaaaacatttgtaagaggaggaatcgttaatgca
tcaaaagaggagcacgaaacagatgaaaaacggggtaaaatctataagccctcgtcccga
ttttcagatcagaaaaaccagccaagtcagccctccaacgagaaacctccgtccctcctg
atgatcgaaaccaaaaagcctccgctgaagaaaggagagaaggaaaagaaaaagagcaat
ttggaactttttaaagaggaattaaagcaaatacaagaggagcgtgatgagaggcacaaa
acaaaaggtagattgagtcgttttgaaccaccccagtctgattcagatgggcagcgtcgc
tcaatggatgctccttcaagaagaaacagatcgtctggtgtcctggatgattatgcacca
ggttcccatgatgttggagatccaagcacaacaaatttatatcttggcaacattaatcca
cagatgaatgaagagatgttatgtcaggaatttggacgctttggaccattagcgagtgtt
aaaattatgtggccaagaacagatgaagaaagagcaagagaaagaaattgtggcttcgtt
gcctttatgaacaggagagatgctgaaagagcgttgaagaatttaaatggcaagatgatc
atgtcgtttgagatgaagctgggctggggcaaagctgtacctattccaccacatcccatc
tacattccgccttccatgatggagcacaccctccctcctcccccgtcaggactgcctttt
aacgcccagcccagggagaggttgaagaaccccaacgctccaatgttaccacccccaaaa
aacaaggaggactttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctcgctttgatccaccgaatgatagagtttgtggtgcgggaagggccc
atgttcgaagccatgatcatgaacagagagatcaacaaccccatgttcaggtttttgttt
gaaaaccagactccagcccatgtctattatcggtggaagctttattcaattcttcaggga
gatgctccaaccaagtggaggacagaagatttccgaatgttcaaaaacggctctttctgg
aggccccccccgctgaacccatacctgcacggcatgtctgaggagcaggagacagaggcc
tttgtggaggaacccaacaagaagggggcactcaaggaagaacagagggacaaactggag
gagattctgcgtggattgacccctcggaagaacgacattggtgatgcgatggttttctgt
ctcaataatgcagaagctgctgaagagattgtcgactgcattacagaatcactgtccatt
ctcaagactcctcttcctaagaagattgcaaggttgtatctggtgtcagatgtgttgtac
aactcttcagctaaagttgccaacgcttcctactacagaaaattttttgaaacaaaatta
tgtcagatattctctgatctcaatgctacttaccgtacaatacaaggccatttacagtct
gaaaatttcaagcaacgggtcatgacatgcttccgagcatgggaggactgggcaatctac
ccagagccatttctgatcaaactgcagaacatcttcctggggctggtgaacatcatggaa
gataaagaaacagaggaagtaccagatgatctggatggtgctcccatagaggaagagctg
gatggtgctccactggaagatgtggatggaattcctattgatgctgctcccattgatgat
ctggatggagtcccaattaaatccctggatgatgaccttgatggagttcctttggacaca
actgaagactcaaaaaagaacgagcctatatttaaagttgccccttccaagtgggaagca
gtggatgaatcagaactggaagctcaagctgttacaacttctaagtgggagctttttgac
caacacgaagaatctgaggaggaggaaattcaaaaccaagaagaagaaagtgaagatgag
gaagacactcagagttccaagtcagaagagcagcacatgtattccaatcccattaaagag
gaaatgcctgaatccaagtcgtcggtgaaatactcggagatgagcgaagagaagcgtgcc
aagctccgggagattgagcttaaggtgatgaagtttcaggatgagttagaatctgggaaa
agacccaagaaaccaggccagagttttcaggagcaggttgaacactatagagacaagctg
ctccagagggaaaaagaaaaagagatggaaagagaacgggacagagacaaaaaggacaag
gagaaatccgagaccaggtccaaggagaagaaggagaaggaggaatcgacacccacacga
aaagagaggaagaggcggcacagcgcttcccccagcccgtcccgcagcagcggcagccgc
cgggccaagtcgccgtcgcccaagtcggagcgctcggagcgctcccacaaggagagctcc
cgctcccgctcctcccacaaagactcccccagggatgtcagtaaaaagggcaagaggtca
ccatctggctccaggacacccaaaagatcgagaagatcacgatccagatcccctaaaaag
tcagggaaaaaatccaggtctcagtcccgttctcctcacagatctcacaagaagtcaaag
aaaagcaaacactga
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