Empidonax traillii (willow flycatcher): 114066097
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Entry
114066097 CDS
T05887
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114066097 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114066097 (SMG7)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114066097 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
114066097 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
114066097
NCBI-ProteinID:
XP_027756306
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEV
KTRWSVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVI
NLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYP
LPAVKVSMDWLKLRPSVFQEAVVDERRYIWPWLISLLNSFQPHEEDLSSNNATPLPEEFE
LQGFLALRPSFRNLDFSKGHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEV
GKLLFVTEIPELLLEDPSEAKESLTLQETSTAEPLCADGSPGLKSVLSSGRSLNNNCDAG
EKPMVTFKENIKPRELNREQGRIYPPKDVARERRDFSKGIVATKNDGKKDNNKRKNEPKK
CGLDKMQEAGKQNVAVQVKSQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPP
LPSRPGFPPPTYVVPPPVAFSMSTGYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIP
YSQQRPSGPGPMTQGPQQTPPPSQQPLSSLPAQATAQSASQLQVQALAQQQQQQQQQSPT
KAVQGLGKSPPHHSGFQQYPQTDSSKQLWNPPQVQGSLGKIMPVKQPYYLQAQDPLKLFE
QSLQPPVMQQQPLEKKMKPFPMEPYNQNPSEVKVPEYYWDSSYGMAENRVMAQQSNMDRR
GKRQGVFRSEQEAVSRMTFEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGP
LASLPGRSLFKSLLEKPSELMSQSSSFLSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKT
EVTPSVAHQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSV
PFSNFGPIGTPDNRDRRVADRWKTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAA
QGPPAMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGAMNPPH
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgcgcgcagtatctccggcaggcagaagtcctgaaggctgacatgaca
gattcgaagctgggtccagcagaagtctggacgtccagacaggctctacaggacttatat
caaaaaatgctcgtgaccgatttggaatatgctttagataaaaaagtggagcaggacctt
tggaatcatgcctttaaaaatcagatcacaacgctacagggtcaggcgaaaaacagagca
aatccaaatcggagcgaagttcaggccaacctttctctgttcctagaggcagctagtggc
ttctacacacagttactccaggaattgtgcacagtttttaacgtggacttgccgtgccgc
gtgaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgccatcgtg
aagccacaatccagctcctgctcctacatctgccagcactgccttgttcaccttggagat
attgctcgctataggaatcagaccagccaggcagagtcttactatagacatgcagctcag
cttgtcccttctaatggtcagccttataatcagttggctatcctagcttcctccaaagga
gaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcctttccca
gctgcctccactaacctacaaaaagcactttctaaagcactggaaagtcgtgatgaggtg
aagactcgatggagcgtgtctgacttcatcaaggcatttattaaattccatggccatgtg
tacctgagtaagagcctggagaagctgagccctcttcgagaaaagctggaagagcagttc
aagaggttgttgttccagaaggccttcaattctcagcagttggtccatattactgttatc
aacctgttccaactgcatcacctgcgagacttcagcaacgaaacggagcagcacagctac
agccaggatgagcagctctgctggacacagctcctggctctcttcatgtcctttcttgga
gttctgtgcaagtgtcctttacaaaacgactaccaggaggactctggggctgcatatcct
cttccagctgtgaaggtttccatggactggctgaaacttcggcctagtgttttccaggag
gcagtggttgatgaaagacggtacatatggccctggctgatctctcttctgaacagcttt
cagcctcatgaagaagatctatccagtaataatgcaaccccccttccagaagaatttgag
ttacaaggattcctggctctgaggccctcgttcaggaacttggatttttccaaaggccac
caggcaattacaggagataaagaggggcagcaacgtcggatacggcagcagcgcctgatc
ttcacaggcaaatggattgctgataatcagccgaggttgattcagtgtgaaaacgaggta
ggaaagctgttgtttgtgacagaaatcccggagctgttactggaggaccctagtgaagcc
aaagagagcctcaccttgcaggagacatccacggcagagccgctgtgtgccgatggcagc
cctggactcaaatcggttctgtcttctggcagaagcctgaacaacaactgtgatgcagga
gaaaagccaatggtcacgttcaaagagaacatcaagccccgggagctgaacagggagcaa
gggcgcatctacccccccaaagacgtagcgagggaaaggagggactttagcaaagggata
gtggccactaagaatgatgggaagaaggataacaacaaaaggaagaatgagcccaagaaa
tgcggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaaatcc
cagacagagatgaggaagactccagtgtctgaagccaggaaaacacctgtaactcagact
ccaagtcaggccagcagttcccagttcatccccattcatcacccaggagccttccctccc
ctccctagccggccaggatttccacctccaacctatgtcgtcccccctcctgtggctttc
tccatgagcacggggtacaccttcccgggtggcgtttctgtcccaggaaccttcctccag
cccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattcct
tacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacacca
cctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtccgcaagc
cagttacaggtccaagctctggcccagcagcagcagcagcagcaacaacagtcccccaca
aaagctgtgcagggcctggggaagagcccaccgcaccactccggattccagcagtacccg
cagacagactcatcgaagcagctctggaatcccccccaagtccaaggctccctggggaag
atcatgcctgtaaagcagccctattacctgcaggcccaggaccctctcaaattatttgaa
cagtcattgcagcctcccgtgatgcaacagcaacctctggagaaaaaaatgaagcctttc
ccaatggagccatataaccagaacccctcagaagtcaaggtgccagaatattactgggac
tcttcctatggcatggctgaaaacagggtgatggcccagcagtcgaacatggaccgcagg
ggaaagcggcagggagtcttccgctccgagcaggaggctgtctccaggatgacctttgag
gaccccaagagctcccctctgcttcctccggacctgttaaagagtctggctgccttggag
gaggaggaagagctgattttctctaatcctcctgatctttacccagctctgctggggcct
ctcgcctctcttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaattg
atgtctcagtcatcgtctttcctgtccctcagtggcttttctcttaatcaggaaagatac
ccaaacaacagcatgttcaatgaggtgtatgggaaaaacatgaataccagcacaaaaaca
gaagtcaccccctcagttgcccaccaggagacttcactctattctctctttgaagggact
ccgtggtctccatcccttccagccagctcagatcattcgacaccagccagccagtctcct
cactcctccaaccccagcagcttgccaagctcccctcctacccataaccacaattctgtt
cccttctccaactttggacccattgggactccggacaacagagaccggagagttgcagac
cgctggaaaacagataagccagccatgggagggtttggtctggactatctcccggcaacg
tcgtcctcttcggagagcagctggcaccagtccagcgctcccagtggcacctgggcagcc
caaggccctcccgccatggaggactcctcagctgtgctcatggagagcctgaagtccatc
tggtcgagttccatgatgcaccccggcccttcggccctggagcagctgctgatgcagcag
aagcagaagcagcagcgtggacaaggcgccatgaacccgccgcactga
DBGET
integrated database retrieval system
