Empidonax traillii (willow flycatcher): 114066189
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Entry
114066189 CDS
T05887
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114066189 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
etl01001
]
114066189 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114066189 (TAF1)
03036 Chromosome and associated proteins [BR:
etl03036
]
114066189 (TAF1)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
114066189 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114066189 (TAF1)
Protein kinases [BR:
etl01001
]
Serine/threonine kinases: Other
TAF1 family
114066189 (TAF1)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114066189 (TAF1)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
114066189 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
114066189
NCBI-ProteinID:
XP_027756501
LinkDB
All DBs
Position
Unknown
AA seq
1913 aa
AA seq
DB search
MSDSESEEDADGGRAEPFSLAGFLFGNINEAGQLEGDSVLDKESKKHLAGLGVLGLGNLI
TEITASEEESPESEGAHLDEEGWVKSTEDAVDYSDITEVAEDESRRYKQAMGSLQPARRP
DEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATVSEGGIILPSIIAPSSAASD
KADFSSSSDSESEMGPQEARQAESQEGKLTLPLAGIMQRDATKQLPSVTELFPEFRPGKV
LRFLRLFGPGKNVPSVWRSARRKRKKKHRELAQEVQTQEGEVVVESGVEGKSPWEYEFAA
PPPPEQCLSDDEITMMAPVESKFSQSTGDIDKVTDTKPKVAEWRYGPAQLWYDMLGIPED
GSGFDYGFKLKEKSEQEVKGHADEGDSESTKEKDDLLADEHFLMVTQLQWEDDVIWNGED
VKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNSPIPLAQKPSVAGVLGLA
KCKEKAPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPN
DENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPW
NLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKYSF
GALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSE
ENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFEN
NLFRAPIYLHKMPETDFLIIRTRQGYYIRELVDIFVVGQECPLYEVPGPNSKRANTHIRD
FLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLK
PDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDD
EVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVK
KTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMS
KFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIE
NMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKERGKKDRRDKKGLSSGASANSHK
DDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPAVIDAYCRIRTTKDEEFI
RKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKERPDLKLKCGA
CGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLG
KQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLS
SILEGIINDIRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFR
EHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVA
FSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETIRKNISKHKYQNRE
TFLDDVNLILANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKEAAL
EEADLESLDPMTPGPYTPQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGD
LADEEEGSAQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVEPNAV
RPKQPHVLQENTRMGMDNEESMMSYEGDGGETSHVMEDSNISYGSYEEPDPKSNTRDTSF
SSIGGYEISEDEEEEEQQRSGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcggagagcgaggaggatgcggacggcggccgcgccgagcccttctctctg
gccgggttcctcttcggcaacatcaacgaggcggggcagctggaaggggacagtgtcctc
gacaaggaatccaagaagcacttggcggggctgggcgtgctgggactgggcaacctgatc
actgagatcacagccagcgaggaggagagcccggagagcgagggagcacacctggacgag
gaaggctgggtgaagagcacggaagatgctgttgattactcagacatcaccgaggtggca
gaggacgagagccggcgctacaagcaggcgatgggcagcctgcagccagctcgaaggcca
gatgaagacgaggacgattacgatgccgactgtgaagatatcgattccaagctgatgccg
ccgccaccaccacctccagtacctggaaaaaaagaagatgaaaaggatgcagctgccact
gtatctgaaggtggtatcattttgccctccatcattgctccttcctctgctgcctccgac
aaggcggatttcagcagcagctctgattctgagtcagagatggggcctcaagaagccagg
caggcagaatcccaggaaggcaaactcacccttcctcttgcaggaatcatgcagcgagat
gctaccaagcagttgccaagtgttacagagctcttcccagaatttcggccaggcaaggtg
ctgcgtttcctgcgtctctttggccccggtaagaacgtcccgtccgtctggagaagcgcc
cggaggaaacgcaagaagaagcatcgggagttggcccaagaagtgcagacacaggagggt
gaagttgtggttgagagtggagtggaaggaaaatctccttgggagtacgagtttgctgct
cctccccctcctgagcagtgcctttcagatgatgagattaccatgatggcacccgtggag
tccaagttctcccagtcgactggtgacatcgacaaagtgacagacacaaagcccaaggtg
gcagagtggcgctacggcccggcacagctctggtatgacatgctgggcatccctgaggat
ggcagtggatttgattacggtttcaagctgaaggagaagagcgagcaggaggttaaagga
cacgcagatgagggggactcagagtcaacgaaggagaaggatgatctgctagctgatgag
cacttccttatggtgacacagctccagtgggaagatgatgtcatctggaatggagaggat
gtcaagcacaaggggactaagacacagcgtgcaagtttggcaggctggctgccttcgagc
atgactagaaatgccactgcatacaatgcccagcaaggtttgaaccgcagtggctctttg
ctcaattcaccaattccactagcacagaagcccagtgtagcaggagtcctgggtctagca
aagtgcaaagaaaaggcccctgaacagcaagtttccctggatgaagacaagccctggtac
tctattttcccaattgacaatgaagagctggtgtatggtcgttgggaagacaatatcatc
tgggatgatcaggcaatggaaacctacttggatcccccggtcttaacacttgatccaaat
gatgaaaacataattctggaaattcctgatgaaaaggaagaaatgactttgaactctcca
tccaaggagaacaagaaagaatcttctctaaagaagagtcgaatcctgttgggaaaaaca
ggtgtcatcaaggaagagccacagcagaatatgtctcagccagaggtgaaggatccctgg
aacctctccaatgatgagttttactaccccaaacagcagggacttcgaggaacctttgga
ggcaacatcattcagcactccatcccagccgtggagcttcgccagccgttctttcccacc
cacatgggtcccatgaagctgcggcagttccatcgccccccgctgaagaaatactccttc
ggggccctgtcccagccagggccccacgccgtgcagcccctgctgaagcacatcaagaag
aaagccaagatgagggagcaggagcgccaggcgtccggcgggggggagatgttcttcatg
cgcacgccgcaggacctcaccggcaaggatggcgatctcatcctggccgagtacagcgag
gagaacgcccctctgatgatgcaggttggcatggcaaccaagattaaaaattactacaaa
aggaaacctggcaaggatccaggagctccagactgtaaatatggagagactgtttattgt
cacacttccccattcctgggttctctgcatccaggccagttactgcaggcatttgaaaac
aatcttttccgggcccctatttatttacacaagatgcctgaaacggattttctgatcatc
cgcacacgacagggatattacatccgagaactggtggatatttttgtagttggtcaggag
tgcccactttatgaagttcctggtcccaactctaaacgagccaacactcatatcagagat
ttcctgcaggtctttatttatcgcctcttctggaagagcagggaccgccctcggaggatc
cggatggaggacatcaagaaggcctttccctcccactccgagagcagcatccgcaagcgg
ctcaagctttgtgctgatttcaaacgcacagggatggactcaaactggtgggttctgaag
ccagatttcagattgccaacagaggaggagatcagagcaatggtgtccccagagcagtgc
tgtgcctattacagcatgattgcagctgagcagcgactgaaggatgcaggttacggggag
aaatccttctttgcaccagaagaggagaatgaagaggatttccaaatgaagattgatgac
gaggtgcgcacggccccgtggaacaccacgcgggccttcatcgctgccatgaagggcaag
tgcctcctggaagtgactggtgtcgcagatcctactggttgtggtgaaggcttttcttat
gtcaagattccaaacaaaccaacccagcagaaggatgataaagagcctcagccagtgaaa
aagacagtgactgggacagatgctgatctgcgccggctttcgctcaaaaacgccaaacag
cttctgcgtaaatttggagttcctgaggaggagatcaagaagctgtcccggtgggaggtg
atcgatgtggtccggacgatgtccacggagcaggctcgctcaggggaaggccctatgagc
aaatttgcacgtggctctcggttctctgtggcagaacatcaggagaggtacaaagaggag
tgtcagcgcatctttgatttacagaataaggttctggaatccactgagatcctgtcaaca
gacacagacagcagctcagctgaagacagtgactttgaagagatgggcaagaatattgag
aacatgttacagaacaagaaaaccagttctcagctctctcgggaaagagaagagcaggaa
cgaaaggaattgcagaggatgcttctgggagaagacagtggcaatgacaaagagaggggc
aaaaaggacaggagagacaaaaaggggctgtcttcaggagcctcagccaactctcacaag
gatgatgacactgcctctgtaaccagcctcaactcctctgccacgggccggcgcctcaag
atctaccgcacgttccgagacgaggatgggaaggaatacgtgagatgtgagacggtccgg
aaacccgcggtcatcgacgcctactgccggatacggaccaccaaggacgaagagttcata
cgaaagtttgctctgtttgatgagcagcaccgtgaggagatgcggaaggagcggcgcagg
atccaggagcagttacggcgcttgaaacggaaccaggagaaagagaaactcaagggccct
ccagaaaagaagcccaagaaaatgaaagagcggccagacttgaaactgaaatgtggagca
tgtggtgccattgggcatatgaggactaataagttctgccctctctactaccaaacaaat
gccccaccttctaatcctgttgcaatgacagaggagcaggaggaagagctggaaaaaaca
gtcattcacaatgataacgaagaactcatcaaagtagaagggacaaaaattgtcctggga
aaacagctgattgagagtgctgatgaggttcgcaggaaatcactggtcctgaagtttcct
aaacagcagctccctccaaagaagaagcggcgagtggggacaacagttcactgtgattat
ctgaatcgtccccacaaatccatccaccggcggcgaacagaccccatggtgacgctgtca
tccatcctggagggcatcatcaatgacataagggatcttcctaatacataccccttccac
acacctgtcaaccccaaagttgtcaaggattattacaagatcatcacccggcccatggat
ttgcagaccctgcgtgaaaatgtccggaagaggcagtacccgtcccgggaggagttcagg
gaacacctggagctgattgtgaagaacagcgcgacctacaatgggccaaagcactccctg
acccagatttctcagtccatgctggacctgtgtgatgagaagctaaaagagaaggaagat
aaactggctcgattagagaaagcaattaatcccctcctggatgatgatgatcaagtggcc
ttttccttcattttggataacattgtcactcagaagatgatggcagttccagattcttgg
ccgttccatcacccagttaacaagaagtttgttcctgattactacaaggtgattgccaac
ccaatggatctggagaccatccgcaagaatatctccaaacacaagtaccagaacagagag
actttcctggatgacgttaacctcatccttgccaacagcatcaagtacaatgggccagac
agtcagtacacaaaaacagcccaggagattgtgaacatctgctatcagactttagctgag
tacgacgagcacctgactcagctggagagagacatctccactgctaaggaagcagcactg
gaggaggcagatctggagagtcttgatccaatgacccctgggccctacaccccacagatg
cgccaggggcgaggaaggctgggagaggaagactctgacgtagatatcgaaggatttgat
gaggatgacgatgggaagcccaagactccggccccagaggtggaagatgcagatggtgac
cttgctgacgaggaagaaggatcagcccagcagccccaggccagtgtcctctatgaagac
ttgcttatgtctgatggagaggatgatgatgatgggagtgatgaagagggagacaatcct
ttctcatccatccagctgagtgagagtggcagtgactcagacgtggagcccaatgcggtg
agacctaaacagcctcatgttctccaagagaacacgaggatgggcatggacaacgaggag
agcatgatgtcttacgaaggagacggtggggagacatctcacgttatggaggacagcaac
atcagttacggcagctacgaagaaccagaccccaaatccaatacgagggacacgagtttc
agcagcatcggagggtacgagatctcggaagacgaggaggaggaggaacagcagcgctcg
gggccaagtgtgttaagtcaggtccatctgtctgaggatgaggaagacagcgaggacttc
cattccatcgcaggagacagcgacctggactcagatgaatga
DBGET
integrated database retrieval system
