Empidonax traillii (willow flycatcher): 114066272 Help Entry 114066272         CDS       T05887                                  Symbol PDCD11 Name (RefSeq) protein RRP5 homolog isoform X1   KO K14792   rRNA biogenesis protein RRP5 Organism etl  Empidonax traillii (willow flycatcher) Brite KEGG Orthology (KO) [BR:etl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:etl03009]     114066272 (PDCD11) Ribosome biogenesis [BR:etl03009]  Eukaryotic type   90S particles    Other 90S particles     114066272 (PDCD11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  S1_RRP5 S1 OB_PDCD11 HAT_Syf1_CNRKL1_N Spt6_S1 OB_RRP5_4th HAT_PRP39_N Suf HAT_PRP39_C HAT_Syf1_CNRKL1_C TPR_14 OB_RRP5 PRP6_TPR TPR_19 DUF8501 CFAP70_mid_TPR TPR_YpiA_C CFAP70_TPR_C ARM_TT21_5th ARM_TT21 WD40_APC4_C-half TPR_CcmH_CycH TPR_9 TPR_12 Motif Other DBs NCBI-GeneID:  114066272 NCBI-ProteinID:  XP_027756626 LinkDB All DBs Position Unknown AA seq 1837 aa AA seqDB search MASLEENFPRGGIQKKPAEGKTSKPELERDNLFDVHHDEKSQKRKRSQKDQGKQKKFKAD KTATAKDNVVNIGPLTIQALCEEMLLLGCIKEVSDYELVISLPSGLSGFVPITQISDAYS KLLSQQVAQGELPEGLNSLPDMYSPGTLVRCIVTSVEKSDDGRRSIKLSIDPKKVNKGLT ASALATGMLLSGSVSSVEDHGYLIDIGVSGTHAFLPHEKAKNYIKALKRGPDLKIGQNLT CVIVEVKNEGRVVRLSIDRSEVAASLATEKQNWALSNLLPGLVVKARVQKVTPFGMKLTF LCYFTGIVDFMHMDPEKSMNYSPDQVVKACVLSVHPGSKAVRLTLRPAFLHPGGSPNQLS SDRLGAVVEESTVKAFYKQFGALFELDDGTLAFARLKHLSKNRKSFKPGAFKAGCKHKCR IIDYSLMDEMCIVSLKNQVIEARFLQYQDIHTGDVVQGKVLSLKPFGMQVKVADGIKGLV PSIHLADVILKQPEKKYNIGDEVKCRVLECNPAGKKLILTLKKSLIQSNLPVLTNYEDAK PGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSTEPISCPDKVFYEGQVVKVIVLKCE PQQERLLLSFRLSSKSGPEDKREYTSKENQEMKYQIGEIVDVKVLKKKDNGLEVSILEDE DNMVAWIPTQHLSDFVATSKLLWHCLQEGDVLPRVMCLSDKGEHIILSRKSAVISAVQEE QVVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ TVIAKVMSTDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFNELKEIRDLLKRGESSLA QGLCELVPGKELQLVVQDVREDGSALFSGSCVSGLTVTATRYHVGEKNVVPGKKMKALVL HVDAPTSEVYVSLREELLKQKPKQRLRENSQHSAVVQHITEQFALVSLLGTGQLAAVPIP SHFNDTFRFDSEKLKVGQTISATLRAVKENDHGVLLAVQGSAKKNVFVRVRNESETVLEE MLPAVKHSLSPGDIVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTFTLRA GQKVTARVIGGREVNTHRYLPITHPHFTQSIPELSIRPSEKEGEVTAMLNLKEDSACKKL ELYSVGQTVTCFVKKYNTLKNWLEVEVSPDIRGRVPHLLLSMNTKVLKHPEKSFKLGQAI SATVTGTDITETNLCLSLTGIQSLEQGTITVGMVAKVTPHIGLTIALPGGKTGKVSIFHL NDTYTEDPLGNFKVGKIVRCYILSNKNGKIQLSLRQSRLNPKIYSKVEDVEITCIKDVKK GQLVRGYVKSITPSGVFFGLSTSVLGRILFQNVSPYFVQKHSLYEKYLPEGKLLTAKVLG VNGKEKHIELSLLPEDTGMPSVLPESLGLPQYGAEEDKREADDKEKSEEPKLKTKRRRGN SESGQEAKPKKRKICPADENDSGIEVYYREEDEDDQEEEAAKKKSKIRKPGEAPRLQVSV GFTWDEDMNAMDIPLLNQKEESSESEEEEDPQSKLKKKTKKEKELEKQKKEKELCKVEAA LMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTISFREE QEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEELY HTMLKRFHQEKSVWLNYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFRF EDTEHAKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKFF FKRYLDYEKKFGTAESVLAVKKAALEYVETKSSLTDT NT seq 5514 nt NT seq  +upstreamnt  +downstreamnt atggcatctttggaagaaaactttcctcgagggggtatccagaaaaaacctgcagaggga aaaacatccaagccagagttagagcgggacaatttgtttgatgttcaccatgatgaaaaa tcccagaaaagaaaaaggagccaaaaggatcaaggaaaacagaaaaagttcaaggcagac aaaacagccactgctaaagacaatgttgtgaatattggaccactcacgattcaggcactc tgtgaggagatgctgctgcttgggtgcataaaggaggtcagtgactacgagctggtcatc agtttgcccagtggcctttcgggatttgtgccgatcacgcagatcagcgacgcctacagc aaactgctgagtcagcaggtggcccagggagaactcccggagggcttgaattcactcccg gacatgtattctccagggacactggtcaggtgcatcgtgaccagcgttgagaaaagtgac gatggacgtcgcagcatcaaattatcaattgaccccaagaaggtcaataagggcctgacc gcctcagcactagcaacaggcatgctgctctctggctctgtatctagcgtggaagaccat ggctacctcatagatattggagtcagtgggactcatgctttccttcctcatgagaaagcc aaaaattacatcaaagcacttaagagagggcctgacttgaaaataggccagaacctgacc tgtgtcatcgtggaagtgaagaacgagggcagagtggtccgtttgtccattgatcggtca gaggttgctgcatccctcgccacagagaaacagaactgggcgctctctaacttactgcca gggctggtggtgaaagctcgagtgcagaaggtgaccccgttcggaatgaaactgacattt ctgtgttacttcactggcattgtggatttcatgcacatggacccagagaaatccatgaac tattctccagatcaagtggtgaaggcctgtgtcctgtctgtgcaccccggctccaaggcg gtgcggctcacgctgcgcccggccttcctccaccccgggggatcccccaaccagctctcc agtgaccgcttgggggccgtggtggaggagtccacagtgaaagctttctacaagcagttt ggagccctctttgagctcgatgatggcactcttgcgtttgcacggttgaagcatctttca aagaacagaaaatccttcaaacctggggcatttaaggctggatgtaaacacaaatgtcga atcattgactacagcctgatggatgagatgtgtattgtatctctgaagaatcaggttatt gaagcacggtttctgcaataccaggatatccacacaggtgatgtggtgcaaggcaaagtg ctttctctgaaaccctttgggatgcaggtgaaagtagctgatggtattaaaggacttgtg ccatccatccatcttgctgatgtgatcctgaagcagcctgagaagaagtacaacatagga gatgaagtcaagtgtcgggtgctagagtgcaatcctgcaggaaagaagctgatccttact ctaaagaaaagtcttatccagtcaaaccttccagtcctcacaaattatgaagatgcaaaa ccaggtctgatcacacatggctttgtggtgtgtgcaagggagtttggctgcattgtgaag ttctataatgatgtcaaaggtctggtacccaagaatgagctgagcacagaacccatatct tgtccagataaagtcttctatgaaggccaggttgttaaagtaatagtcttaaaatgtgag ccccagcaggaaagactcttgttgtccttcaggttatcaagcaagtctggccccgaagac aaaagggaatatacttcaaaggaaaaccaggaaatgaaatatcaaataggagagatagtt gatgtgaaagtcttgaagaagaaagataacgggttagaagtttctatcttagaagacgaa gacaatatggttgcctggatccccacgcagcacctctctgactttgttgctacctccaag ctcctgtggcactgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgac aagggagagcacattatcttgagcagaaagtctgcagtgatttctgctgtacaggaggag caagttgtgagaagcttctctgaaatccagcctggcatgctgttgactggttatgtgagg aatgtgatgccctttggagtgtttgtggagttcccttttggtgtgacaggactggcaccc aaagtgagcatgagtgacaagtttgtgacagacaccaaggaccactttgtggtgggacag actgtcattgcgaaggtgatgagcactgatgaggagaagcagcgtgtgctcctcaatctg aaggtgtcagagtgcagctcgggtgattctgctgcagagagctttgccctcctgaatcaa tatttcaatgagctgaaagaaatcagggacttgttgaaaagaggggagtccagcctggcc caaggcctttgtgagttggtgcctgggaaggagctgcagctggtcgtgcaggatgtaagg gaggatggctcggcactgttcagtggcagctgtgtctcagggttgactgtaactgccact cgctaccatgtgggagaaaaaaatgttgtccctggtaagaaaatgaaggcattggttctt cacgtggatgcccccacatccgaggtgtatgtttctcttcgggaagagctgttaaagcag aaacccaagcaacggctcagagagaactcccagcactctgccgtcgtgcagcacatcaca gaacagttcgccctggtgtctctgttgggaacaggccagctggcagctgtgcccatcccc tctcacttcaacgacaccttccgctttgactcggaaaaactgaaggtgggacaaactatc tctgcgaccttaagagcggtgaaagagaatgaccacggggtcttgttagcagtgcaaggc tcagcaaagaagaatgtttttgtgagggtccggaatgaatctgagacagtattagaagag atgcttcctgctgtgaaacactcgctttccccgggggatattgttactgggaccgtgaaa tctgtcaaaccaacccatgttacagttgctatcgatgacaagctgacaggttcaatccat gcatcccggattctggatgaagtgcccataggctcttttccaacgtttaccctgagagct ggacagaaggtgactgctcgagtcattggaggcagagaagtgaatactcacaggtacctg cccatcacccatccacacttcactcaatccattccagagctcagcattcgaccaagtgaa aaagaaggggaagtcacggcaatgctgaatcttaaagaagacagtgcctgcaagaaactt gaactctacagtgtgggacaaacagtcacctgttttgtaaaaaagtataacaccctcaaa aattggctggaggtagaagtctcccctgacattcgaggaagggttccccatctgctgctg tctatgaacaccaaggtcttaaaacatccagaaaagagctttaaacttggccaggcaata tcagctacagtgactggaacagatatcacagaaacaaacctctgcttgtcactcacagga attcagtcactggagcagggcaccatcaccgtaggcatggtagcaaaggtgactccacac atcggtttgaccattgcactgccaggtggcaagactggcaaagtcagcatctttcacctg aatgatacttacacagaggatcctttgggtaacttcaaagttgggaagattgtcaggtgt tacatcctgtctaacaagaatggcaaaatccagttatctctccggcaatcccggctaaat ccaaagatctacagcaaagtggaagatgttgaaataacgtgtattaaggatgttaaaaaa ggccagctagtgagaggctatgtcaaatcaatcactccatcaggtgtattctttggcttg tccacttctgttctgggccgaatcctgttccagaatgtttccccttactttgtacagaag cactccttatatgaaaaatacctgcctgaaggaaagctgctcactgctaaagtgcttggt gtaaatggaaaagaaaaacatattgagctttctctcctgcccgaggacactgggatgcca agcgtcttgcctgaatctctaggcctaccacaatatggtgcagaggaggacaaaagagag gcagatgataaggaaaaaagtgaagagcctaagctgaagacaaaaaggagaagaggaaac tctgaaagtgggcaggaggcgaagccaaaaaaaaggaagatctgcccagcagatgaaaat gacagtggaattgaggtatattaccgtgaggaggatgaggatgaccaggaggaagaggca gctaaaaagaaatctaagataaggaaacctggtgaagctcccaggctgcaggtttccgtg ggcttcacgtgggatgaggatatgaatgcaatggatatacctttgctgaatcagaaggaa gagagctcagagagtgaggaggaggaggatccgcagtccaagttaaagaagaaaacaaag aaggagaaggagctagagaagcagaagaaggagaaggagctttgcaaagtagaggcagct ctgatggaccccagtcgacagccccagtcagcagatgactttgaccgcctggtgctgagc agtcccaacagttccatcctctggctgcagtacatggctttccacctccaggctacagag attgagaaggccagagctgtagcagagagagcacttaagacaatctctttcagggaagaa caggagaagctgaatgtctgggtagctctgctgaacttggagaacatgtatggtactgag gagacattgatgaaggtctttgagagagctgtccagtacaatgaacctctgaaagtcttc cagcatctgtgtgacatctatgccaattctgagaagtacaagcaagcagaagaattgtac cacacgatgctgaagcgttttcatcaggagaaatccgtgtggctgaactatgcctcgttc ctcttgaagcaaggccagactgaggctacacacaggcttttggagcgtgctctcaaggct ttgcccaccaaagaacatgtggatgtcatttcaaggtttgcacagctggagttccgtttt gaggacacagagcacgccaaggccctctttgagagcaccctcagcagctatcccaagcgg acagacatttggtccatctacatggacatcatgatcaaacacggcagccagaaggaagta cgggacatctttgagagggtcatacacctgagcttggcaccaaagaagatgaaattcttc ttcaaacgctacctggattatgaaaagaaatttggtacagcagaaagtgtcctggctgtt aaaaaagcagcacttgagtatgtggagaccaagagttcccttactgacacctaa

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