Empidonax traillii (willow flycatcher): 114066293
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Entry
114066293 CDS
T05887
Name
(RefSeq) nucleolar RNA helicase 2-like isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etl03009
]
114066293
03036 Chromosome and associated proteins [BR:
etl03036
]
114066293
Enzymes [BR:
etl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114066293
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-60S particles
Helicases
114066293
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
114066293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114066293
NCBI-ProteinID:
XP_027756663
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MPEATRCGSGSRAESDSDCPMDTEAALESGRRRHKKEKKEKKSKRRDKFQRGKAPTDESE
ESDEEVYTPKVKKSKGVSKQNGHAREESLEKPKLSSLNNSKSSRKSRQSSSSETSSDSES
ESEQEQELSGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVFSGKDVIAQAR
TGTGKTFSFAIPLIEKLQGESQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVAC
FYGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAE
QVEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTV
EHLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDI
PQKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRA
GRTGICICFYQRKEEYQLRHVEQKAGISFKRVGVPTATDIIKASSKDAMRCLDSVPQTAI
EYFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDAGFVTMILRCSEEINNMS
YAWRRLREVLGDDVDRKVNRMCFLKGKMGVCFDVPAADRKEIEEKWEDSKHWRLCVATEL
PELVESLRGGGGGGGGGGGGGGGNGRSFSSSRNGRRGGSGRNRFRGRGQKRSFSRAFEH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggccacgcggtgcggcagcggcagcagggccgagtcggactccgactgcccc
atggacaccgaggcggccctggagagcggccgccggcgccacaagaaggagaagaaagag
aagaaatctaaacgccgggacaagtttcagagggggaaggctccgacagatgaaagcgag
gagtcggatgaggaggtttataccccgaaagtcaagaagtcgaagggtgtcagtaaacag
aacggtcacgcgagagaagaaagcctggagaaaccgaaattgtcttccttaaacaacagc
aaatcctcccgcaagagccggcagagcagttctagtgagacatcaagtgacagcgagagc
gagagtgagcaggagcaggagctgagtggcgaacagaaggagggggctttctccaatttt
tctatttccaaagaaactgtccagcttcttcaagctcgaggagtgacgtacctgtttccc
gtgcaagtgaagaccttcaacccagtgttttctggcaaagatgtcattgctcaggcacga
actggaacaggaaaaacattctcttttgccattcccttaattgaaaagcttcagggagag
tcccaggaaagaagacgaggccgtccacccaaggttctagttctttgtccaacaagagag
ctggcaaatcaagttgccaaagatttcaaggacatcacaaggaagctgacagtagcttgt
ttttacggaggaactccatataatggacaaattgatctcatgagaagcggcattgacatt
ttggttgggacacctggtcgtatcaaagaccatcttcagaatggcaaactggacctcacc
aaggtgaaacacgttgtgcttgatgaagttgaccagatgctggacatggggtttgctgag
caagtggaagacattttacgagttgcatacaagaaggactctgaagacaatccccagacg
ctgctgttttctgccacttgcccgcactgggtgtatgatgtggccaagaaatacatgaag
tctagatatgaacagattgaccttattgggaaaagaactcaaaaggctgctacaacagta
gaacatttggcaatagagtgtcactggtctcagagagctgcagttattggggatgtcatc
caggtctacagtggcagccacgggaggaccattgtgttctgtgagaccaaaaaggaagca
aatgaactggctctgaatgcttccatcaaacaggattgccagtcattgcatggtgacatt
cctcagaagcaaagagagatcacactgaaaggttttagaaacggttcatttaaagttctg
gttgcaaccaacgtagctgcccgtggtttagatatcccagaagttgacctggttgtacaa
agctcaccaccaaaggatgtggagtcctacatccaccgctctgggcgcacgggtcgagct
gggcgcacggggatctgcatctgcttttaccagcggaaggaggagtaccagctgagacac
gtggaacaaaaagcgggcatttcgttcaagcgcgttggtgttcctactgcaacagacata
ataaaggcttccagcaaagacgccatgaggtgcctggattccgttcctcagacagctatt
gagtatttcagagaatctgctcagttgctgataaaagaaaagggaccagttaatgctctg
gctgcagctctggcccatatttcaggggctacttccatcgagcagcgctcgctgctgaac
tcagatgcgggcttcgttacaatgatcctacgctgctccgaagaaataaacaacatgagc
tacgcctggcgaaggctgcgagaagtgctgggtgacgatgtcgatcggaaggtgaacaga
atgtgtttcctcaagggaaaaatgggtgtgtgcttcgacgttcctgcagcagaccgaaaa
gaaatagaggaaaaatgggaagattccaaacactggcgtttgtgcgtggcaactgaatta
cctgagttggtggaatccttgcgaggaggaggaggaggaggaggaggaggaggaggtggg
ggaggaggaaacggccgaagcttctcaagctccaggaatgggcggcgtggtggctcgggt
agaaacagattcaggggcagaggccagaaacgaagcttcagcagagcatttgaacattaa
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