Empidonax traillii (willow flycatcher): 114066318
Help
Entry
114066318 CDS
T05887
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114066318 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114066318 (TRIP12)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114066318 (TRIP12)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
HECT type E3
114066318 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
Maestro_HEAT
Motif
Other DBs
NCBI-GeneID:
114066318
NCBI-ProteinID:
XP_027756715
LinkDB
All DBs
Position
Unknown
AA seq
2065 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTDTSPETNKPHTKSKRRHSDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSSVESTGAEEKSAKVSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAVASASSTAPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEPSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEPPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKV
CTNGSGTLGTTTISTGTATAAGNAAAELGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPK
RGPRRPKYSPPRDDEKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPART
AGVSGLARAASKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGSNPALNVLQRLCTAT
EQLNLQVDGGTECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLK
RFLHVFFSSPLPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGS
SFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYS
LQSEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKTS
PRNSKKHDELWHDGVCPSVLNPLEIYLISTPPENITFEDPSLDVILLLRVLHAISRYWYY
LYDNAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGSQEGT
KYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWML
RQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSV
EDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFES
VFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFD
SEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSTIEIMREKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaataccacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagagagagtcaacacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattcccgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcccagctctgctaaaaaacccaaagcacttcaacacactgac
acttccccggaaaccaacaagccccacacgaaatctaagagaagacactcagaccaagaa
cagcccaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctgggagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
gggtcatcagttgaatcaactggcgctgaagagaagtcagcaaaagtctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacctcctcctcctcttctgctgttgcctctgcttcttctactgctcctcagggt
gccagagtgaaacagggaaaggaccagagcaaggccaggcgttcccgttccgcatccagc
cccagcccgaggaggagtagcagggacaaagaacccagtaaaacaggtggctcttcaaag
tttgactgggccgctcgattcagccccaaagtcagtctgcctaaaacaaaactgtccctg
ccaggctcttccaagtcggagacatcaaaacctggaccttcaggactacaggctaagcta
gcaagtctaaggaaatccaccaagaagcgcagtgaatccccacctgctgagctccccagt
ttgcggcggagcacacgccaaaagaccacgggctcctgtgctagcaccagtcggcgaggc
tctggcctgggcaaaagaggagcagccgaagctcgccgacaggagaagatggctgatcct
gacaacaaccaggatggggtgaactcttcagctgcacgaacagatgagcctccccaggga
gctgcagcttctagttctgttgctggagctgtaggtatgacaacttctggagaaagtgag
tcagatgattctgagatgggaagattacaagctctattagaggctaggggtcttcctcct
cacctgtttggccctcttggtcctcggatgtcgcagctcttccacaggacaattggaagt
ggagctagttctaaagcccaacagctcttacaaggtctccaagccactgatgaaagtcag
caactacaggcagtgattgagatgtgccagctgttggtcatggggaatgaagaaacatta
ggaggatttccagtcaagagcgttgtaccagctttgataacactgctgcagatggagcac
aacttcgacattatgaatcatgcatgccgagccttaacatacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaggttatc
cagtgcatcgacgtggcggagcaggcactgacagccctggagatgttgtctcgcaggcac
agcaaagccatcctgcaggctggtgggctggcagactgtttgctgtacctggagttcttc
agtataaatgcccagaggaacgcgctcgccatcgctgccaactgctgccagagcataact
cctgatgagtttcactttgtggcagactctttgccactgctcacgcaaaggttaacccat
caggacaaaaagtctgttgaaagcacttgtctctgttttgcacggctagtggacaacttc
cagcatgaggagaacttgctgcagcaggtggcttccaaggacttgttaacaaacatccag
cagctcttggtggtgacgcctcccatcctgagctcagggatgttcatcatggtggtgcgg
atgttctccctgatgtgctccaactgccctacccttgcagtccagctcatgaagcaaaat
attgcagaaactcttcacttcctcctttgtggagcctcaaatgggagttgtcaagaacaa
attgaccttgttccacgcagtcctcaagaactttatgagcttacttctcttatctgtgaa
ctgatgccttgcctgccaaaagagggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaatacagatggtgcaatatggcaatggcgagatgacaggggtctctggcat
ccctataacaggattgatagtcgaataatagaggcagctcatcaggttggggaggatgag
atcagcctgtccacccttgggcgtgtctacaccattgactttaactctatgcagcaaata
aacgaggacactggaacagcacgtgccattcagcgaaaaccaaaccccttagccaataca
aacaccagtggacattcagaattgaagaaggatgatgctcgagcacaattaatgaaagag
gacccagaactggcaaaatcctttatcaaaaccttgtttggtgttctttatgaagtatat
agttcttcagctggacctgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaggatgttctgaaaaaccatgctgtttcaagtcat
attgcctccatgctgtcgagtcaagaccttaagatagtggttggagccctgcagatggca
gagatcttaatgcaaaagttacctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaagaacttggcggagtctgaggccctgctgacgagcccccccaaggtg
tgcaccaacgggtctggcacgctgggcaccaccaccatcagcacgggcacggccacggcc
gccggcaacgccgctgctgagctgggctcgcccagcctgcagcacagccgcgaggactcg
ctggatctgagcccccagggaagactcagtgatgttctgaagaggaaaagattgccaaaa
cgagggccaaggagaccaaaatactctcctccgagagatgatgagaaagtagacaatcaa
gctaaaagccctacaactactcaatctcctaaatcttctttcttggcaagtttaaatcct
aaaacgtggggaagattaagcacacagtccaacagtaataacattgaaccagcacgaaca
gcaggagtaagtggtcttgcaagggctgcttccaaggataccatttccaataacagagaa
aaaatcaagggctggattaaggagcaagcccataaatttgtagaacattattttagctct
gaaaacatggatgggagcaatcctgcactaaatgtattacagagactttgcactgcaact
gaacaactcaacctccaggtggatggtggaacagagtgccttgtagaaatccgtagcatt
gtctcggagtccgacgtctcctcattcgaaatccagcatagtgggtttgttaaacagctg
ctgctttacttgacatctaaaagtgaaaaagatgctgtaagcagggatatcagattgaaa
agattccttcatgtatttttttcctctccacttcctggagaagagccccttggaagatta
gagccattagaaaatgcacctttgttggcattagtccataaaatgaacaactgcctcagt
cagatggaacagttccctgttaaagtgcatgacttccctagtggaaacggaacagggagc
agtttttctcttaacagaggatcccaagctttaaaattcttcaatacacatcaattaaaa
tgccaactgcaaagacatccagactgtgctaatgtgaaacagtggaaaggtggacctgtg
aagattgatcctctggctttggtacaagccattgaaagataccttgtagttagaggctat
ggaagagttagagaagatgatgaagatagtgatgatgatgggtcagatgaagaaatagat
gaatctttggctgctcaattcttaaattcagggaatgtgagacacaggctgcagttttac
attggagatcacttgctgccgtacaacatgactgtgtatcaggcagtcaggcagtacagt
ttgcaatctgaggaagagagggagtctacagatgatgaaagcaacccattgggaagagct
gggatttggacaaaaacacataccatttggtacaaacctgtgcgggaggacgaagatgga
aataaggactgtgttggtgggaaaagaggaagagcacaaactgctcccacaaaaacctcc
cctaggaattctaaaaaacacgatgagttgtggcatgatggtgtttgcccttcggtatta
aatcctctggaaatttacctcatatctactccacctgaaaatataacatttgaagatcct
tcattagatgttattcttcttttgagagttttacatgctatcagtcgatactggtattac
ttgtatgataatgcagtctgcaaggagataattccaacctcagaattcatcaacagcaaa
ctgacagcaaaagccaacaggcagctccaggatcctctggtcattatgacaggaaacatc
cccacttggctgacagaactggggaaaacatgcccgtttttctttccgtttgacacccgc
caaatgctgttttatgtaactgctttcgaccgtgaccgagccatgcaaagactgctggac
accaatcccgaaatcaaccagtcggattctcaggacagcagggtggccccacggctggac
aggaaaaaacgcactgtgaacagagatgagctgttgaaacaggcagaatctgtgatgcag
gatctaggcagttcaagagccatgttggaaatccagtatgagaatgaagttggcacaggc
ctaggccccacactagagttctatgcacttgtatctcaggaactacagagagcagacttg
ggcctttggaggggagaagaggtgactttagccaatccaaaaggaagccaggaaggtacc
aagtatatccataaccttcaaggcctttttgcacttccttttggtagaacagccaagcca
gctcacattgcaaaagttaaaatgaaattccgctttctgggaaaactgatggccaaggca
atcatggatttcagactggtggaccttcctcttggacttcctttttataagtggatgcta
cgacaggaaacttccttgacctcgcatgacttgttcagtattgatccagtggtagccaaa
tcaatctatcaccttgaagatattgtcagacaaaagaaaagacttgaacaggataaaaca
cagaccaaagaaagtctgcagtatgcattggaggctctgaccatgaatggctgctcagtg
gaagatctggggctggacttcaccctgcctgggtttcccaatatagaactgaagaaaggg
gggaaagacacaccagtcaccatccacaatttagaggagtatctcagattggttatattc
tgggcactaaatgaaggtgttgccagacaatttgactccttcagagatggattcgaatcg
gtctttcccctcagtcaccttcagtacttctaccccgaggagttggagcagctcctgtgt
ggcagcaaaacagacacttgggatgccaagactctgatggaatgttgcaggcctgaccac
ggttatacacatgacagtcgagcagtgaagtatctctttgaaatcctcagtagttttgac
agtgagcagcaaagactgttccttcagtttgtgacggggagccccagactgcctgtagga
ggtttccggagtctgaaccccccgctgacgattgttcgcaagacctttgagtccacggag
aacccggatgatttcctgccctcagtaatgacttgtgtgaattatctcaaactgccggac
tattccactatcgagatcatgcgcgaaaaactcttgatagctgcgagagaagggcagcag
tcattccatctttcctga
DBGET
integrated database retrieval system
