Empidonax traillii (willow flycatcher): 114066582
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Entry
114066582 CDS
T05887
Symbol
PUS1
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etl03016
]
114066582 (PUS1)
Enzymes [BR:
etl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
114066582 (PUS1)
Transfer RNA biogenesis [BR:
etl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
114066582 (PUS1)
Prokaryotic type
114066582 (PUS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
114066582
NCBI-ProteinID:
XP_027757177
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MLRWGLRVLSRGLPALRPRCRRRTVLAMAEDPRAALGGQTKRLNSGAEVVERLGENGHQD
KRLKRGADEEDAEDQGKKSPKRKIVLLMAYSGKGYHGMQRNVGSSQFKTIEDDLVSALVQ
SGCIPENHGQDMKKMSFQRCARTDKGVSAAGQIVSLKVRLIDDILEKINSHLPSHIRILG
LKRVTGGFNSKNKCDARTYSYMLPTFAFAHKDHDVQEEVYRLDKETLDRVNKLLSCYKGT
HNFHNFTSQKGPRDPSAKRYIMEMSCGEPFVRENMEFAVIQVKGQSFMMHQIRKMIGLVI
AIVKGYAAESILERSWGEEKVDVPKAPGLGLVLERVHFEKYNRRFGNDGLHEPLEWAEEE
QKIALFKEQFIYPTIINTEREEKSMANWLSTLPIHDFNSSAVEMQTNNKNSKNSSDLEGS
DGCGDDSD
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgggggctgcgggtcctgagccgcggcctccccgccctgcggccgcgctgc
cggcggcgcaccgttctcgccatggccgaggatccgagggcagcgctcggcggccagacg
aagaggctgaacagcggcgcggaggtggtggagaggctgggagagaacgggcatcaggac
aaaaggctgaagagaggcgcggacgaggaggatgcggaggatcagggtaagaagtcgccc
aagaggaagattgtgctgctgatggcatattcagggaaaggctaccacgggatgcagaga
aacgtgggatcttcccagttcaagacaattgaggatgacttagtgtctgccctggttcag
tcaggctgcatcccagagaaccacgggcaggatatgaagaagatgtctttccagcgctgt
gctcgcacggataagggtgtgtctgcagctggacagattgtgtcgttgaaggtcaggctg
atagatgacatcttagaaaagatcaatagtcatcttccttctcacatcagaattctgggc
ctgaagagagtcactgggggattcaactccaagaacaaatgtgatgccagaacctactct
tacatgctgccaacatttgcctttgcccacaaggaccacgatgtgcaagaagaggtttac
aggctggacaaagagaccctcgacagggtcaataaactgctctcgtgctataaagggaca
cacaacttccacaacttcacgtcccagaagggccccagggaccccagtgccaagaggtac
atcatggagatgtcctgtggagagcccttcgtcagggagaacatggaatttgcggtgatc
caggtgaaagggcagagcttcatgatgcaccagatcaggaagatgatcgggctggtgatt
gccatcgtgaagggatacgctgccgagtccatcctggagcgcagctggggggaggagaag
gtggatgtccccaaggccccggggctcgggctggttctggagagagtgcactttgagaag
tacaacaggcgctttgggaacgatgggctgcacgagccgctggagtgggcggaggaggag
cagaagattgctctcttcaaagagcagttcatctaccccaccattatcaacacagaaagg
gaggagaaatccatggcaaactggctcagcaccctccccattcacgacttcaactcgtct
gctgtggagatgcaaaccaacaacaaaaattcgaagaacagcagcgatctcgaaggcagt
gatggttgtggtgatgattccgactga
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