Empidonax traillii (willow flycatcher): 114066738
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Entry
114066738 CDS
T05887
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114066738 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114066738 (PNPT1)
03016 Transfer RNA biogenesis [BR:
etl03016
]
114066738 (PNPT1)
Enzymes [BR:
etl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
114066738 (PNPT1)
Messenger RNA biogenesis [BR:
etl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
114066738 (PNPT1)
Transfer RNA biogenesis [BR:
etl03016
]
Prokaryotic type
tRNA degradation factors
114066738 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
OAF_N
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
114066738
NCBI-ProteinID:
XP_027757480
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MELSSGKLAKFADGCAVVQLGDTAVMVTAVSKTKPAPSQFMPLVVDYRQKAAAAGRIPTN
YLRRELGSTDKEILTSRVIDRSIRPLFPGGYFYDTQILCNLLAVDGVNDPDILAINGASA
ALALSDIPWNGPIGAVRVGLVDGETVINPTRKQMSDSALNLVVAGAPQSQVVMLEATAEN
VLQQDLCHAIKVGVKHTQHIIQGIQQLVKERGVVKRTGQKLFMAPEEIVECARKLASNKI
YAVFTDSSHDKVSRDEAINKIRLETEEQLKEKFPEAEPYEIMESFNVVSKDIFRNLILNE
YRRCDGRDLTSLRDIKCEVNMFKMLHGSALFQRGQTQVLCTVTFDSLESSVKSDLISTVV
SGIKDKNFMLHYEFPPYATNEIGKVTGMNRRELGHGALAERALKPVIPPDFPFTIRVTSE
VLESNGSSSMASACGGSLALMDAGVPVSSAVAGVAIGLITKCSQEKGDIEDYRLLTDILG
IEDYFGDMDFKMAGTNKGITALQVDLKLPGIPIKIVMEAIQQATAAKREILHIMNQTLAK
PRPNRKESGPVVETIHVPLSKRLRFLGPGGYNLKKLQAQTGVTVSQLDEETYSVFAPTPS
AMHEAREFIGEICKDDQEVNLEFGAIYTATITEIRDSGVMVKLYPNMTPVLLHNSQLDQR
KIQHPSALGLEVGQEIQVKYFGRDPTDGRMRLSRKILQAPATTTLKTLTDKNSIVLGGAV
PQTSSSSH
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcttctggaaaactcgccaagtttgctgatggatgtgctgttgttcagctg
ggtgacacagcagtgatggtcacagcagtcagcaaaaccaagcctgctccatctcagttc
atgccattagtggttgactatcgacagaaagctgctgcagcaggaagaatccctacaaac
tacctcagaagagagctcggctccactgacaaagaaattctcacaagcagagtcatagat
cggtcaatccgacccctcttcccgggaggatacttttatgatacacagatcctttgtaat
cttttagcagtagatggtgtcaatgatcctgacattctggcaattaatggagcttctgca
gcacttgcattgtctgatatcccctggaatggtcctattggtgcagtcagggtggggctg
gtggatggggagactgtcatcaacccaactcgcaaacagatgtctgacagcgctttgaat
ctggttgtcgctggagctccacaaagtcaagtggtgatgctggaagcaacggccgagaac
gtgctgcagcaggacctgtgccacgccatcaaggtgggggtgaagcacacccagcacatc
atccagggcatccagcagctggtcaaggagcggggcgtggtgaagagaacggggcagaag
ctgttcatggctcccgaggagatcgtggaatgtgccaggaaacttgcttccaacaagatc
tatgcagtgttcacagattctagccacgataaagtttcgagagatgaagcaattaacaaa
atcaggcttgaaacagaagagcagctgaaagaaaaattcccagaggctgagccttatgaa
atcatggagtctttcaacgtggtttccaaggatatttttagaaacctcattctgaacgaa
tacagaaggtgtgacggcagagatttgacttccctcagagacattaaatgtgaagtgaac
atgttcaaaatgcttcatggatcagccttgttccaaaggggtcaaacacaggtgctttgt
acagttacatttgactccctggaatcgagtgtgaaatcagacctgatctccacagtagtg
agtggcataaaagataaaaacttcatgctgcattatgagtttccaccttacgcgaccaac
gagatcggcaaagtcactggcatgaacaggagggagcttgggcacggggcgctggcagag
cgagctttgaaacccgtcattcccccggatttccccttcacgattcgcgtgacttcggaa
gtcttggaatctaatggttcctcctccatggcttctgcgtgcgggggaagtttggcactg
atggatgcaggggttccagtgtccagtgcagtggcaggggtagccatagggctcatcacc
aagtgcagccaggagaagggggacattgaggattaccgtttgctgacagacatcctggga
attgaagattattttggagatatggatttcaagatggcaggtactaataaaggaataact
gccctgcaggttgatctaaaactgccaggaataccaataaaaattgtcatggaagccatt
cagcaagccacagctgcaaagagggagattttacacatcatgaaccaaacgctggcaaag
cccagacccaacaggaaagaaagtggaccggttgtagaaactatccacgttccattgtca
aaaagattaagattccttggtcctgggggttataacttgaagaagcttcaagcacagact
ggtgtgactgtgagtcagctggatgaagagacttactcggtgtttgcccccacgcccagc
gcaatgcacgaagccagagagtttatcggggagatctgcaaggatgatcaagaagttaat
ttggaatttggtgccatttatacagccacgataactgaaataagggattctggagtgatg
gtgaaactgtatccaaacatgacaccggtgctacttcataattcacagcttgatcagaga
aagattcaacaccccagcgccctgggattagaagttggacaagaaattcaggtgaaatac
tttggccgtgaccccacggacggcaggatgaggctgtcgcggaagatcctgcaggcgccc
gccaccaccaccctgaaaaccctgacggacaaaaacagcatcgtgctgggaggggctgtg
ccacagacatcctcctcttcccactga
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