Empidonax traillii (willow flycatcher): 114066766
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Entry
114066766 CDS
T05887
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114066766 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114066766 (POLR1B)
Enzymes [BR:
etl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114066766 (POLR1B)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114066766 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
114066766
NCBI-ProteinID:
XP_027757534
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MAGPAPDPHRLRPPGRGRARRDLTTAHIESFNYAVSEGVYRAVQDVPPVEFALKDSRVSL
VLVGVSIAPPAVPAGTVCLERRVYPAECRGLRSTYRGRITADISWSVNGMPQGTIKQPLG
YIPIMVKSKLCNLYSLSPQELMQHHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPLAMAR
HKWKNRGPGFTEYGVVMHCVKDEHSAINMNLHYLENGCVMMNFIFQKELFFLPLGFALKA
LVNFPDYQIFEELVKGKEGDTFYVNCVTEMMRAVVDAGCLTQQNVLEYLGKSFRIKLSLP
EWYSNEQAADFILSKCICIHLTNRTEKFYLLCMMTRKLYAFAKGECMEDNPDSLMNQEVL
TPGQLFLMFLKERLETWLQSVKFVLEKRAEKAEISLNTDSLVKAFSLAPDFTKPFEYLLA
TGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFAQMRTTTVRKLLPESWG
FLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDIPPLLCSLGVTPIDETPSKPYAECYR
VVLDGSVVGWVERELAPEIAETLRRFKITQEKRFPGRAEVVLIPMTGKPSLYPGLFIFTT
PCRMVRPVRNLFYGKNEWIGTLEQIFMNVASQESEVVPGVTTHQELFPHSILSVVANLIP
FSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYGMDSY
PVGTNAIVAVISYSGYDMEDAMIVNKSSWQRGFAFGSVIKMESIDLSLKASRAGDNLVFG
IRPGDPNVMEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVYYPNKEVGIVDNVRLC
SNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENGMVPDILF
NPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLVSAGYNFFG
TEKMYSGISGLELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPVKGRNVEGGI
RFGEMERDALLAHGTSFLLQDRLFNCSDGSIAYVCTSCGSMTSPVLEKLPNSSLASSRRY
SCSVCSEVDSIEVVPVPHVFRYFVAELAAMNIKTKLKVE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccgcgccggacccgcaccggctgcggccgccggggcgcggcagggcccgg
cgcgacctcaccacggcccacatcgagtccttcaactacgccgtcagcgagggcgtgtac
cgcgccgtgcaggatgtgcccccggtggagttcgcgctgaaggacagccgggtgtcgctg
gtgctggtcggggtgtccatcgccccccccgccgtgccggccgggacggtctgcctggag
aggagagtgtaccccgccgagtgccgcggcctccgcagcacctaccgcggcaggatcacc
gctgacatcagctggtcagtaaatggcatgccacaagggactatcaaacagcccttaggg
tatattccaatcatggtgaagtccaaattgtgcaacctctacagtctttctccacaggag
ctcatgcagcaccatgaggaggaagaggaaatgggaggctactttataattaatggctta
gaaaaagttattaggatgctgattatgccgaggcgaaatttccctcttgcaatggcaaga
cacaaatggaaaaacagaggccctggtttcacagagtatggagtagtgatgcactgtgtt
aaggatgagcacagtgcaataaatatgaaccttcactacttggaaaacggctgtgtcatg
atgaatttcatttttcagaaagagttgttcttcctccccttgggatttgctctgaaggca
ttagttaattttccagactaccagatttttgaagagctggtcaaaggaaaggaaggtgac
accttttacgtgaactgcgttactgagatgatgagagcggtggtggatgcgggctgtttg
acacagcaaaatgtcctcgagtacctgggaaagagcttcagaataaaactcagccttcct
gagtggtacagcaatgaacaggctgcagatttcattttgagcaagtgcatctgcattcac
ctgacgaatagaactgaaaagttctacctgctctgtatgatgacccggaagctgtatgct
tttgccaaaggggagtgcatggaggataatccagacagtctcatgaatcaagaggtgctt
accccaggacagcttttccttatgtttttaaaggagaggcttgaaacctggctgcaatct
gttaagtttgttttggagaaaagagcggaaaaggcagagatcagcctaaacacagacagc
ttggtgaaggcattcagcctggcaccagacttcaccaagccatttgaatatcttcttgca
actggcaatctgcgatctaaaaccggcctgggcatgttacaggacagtggtctctgtgtg
gtgggggacaagctgaatttcatccgctacctttcccacttccgctgcatacacagaggg
gcagcgtttgcccagatgagaactacaactgtgcgcaagctgctgcccgaatcctggggg
ttcctgtgccctgtggacaccccagatggagaaccgtgtggtctgatgaaccacatgaca
gctgtgtgtgaaatagtgacagagatggtgcccgtgacagacattccacctttgttatgt
tccttaggtgtcacccccattgatgaaactccaagcaagccttatgcagagtgctacaga
gttgtgctggatggctctgtggtgggctgggtagagagggagctggctcctgagattgca
gaaaccctccgccgtttcaagataacacaagagaaaagatttcctggacgggcagaagtg
gtccttatcccaatgacaggaaaacccagtctgtatcctggattgttcatttttactacg
ccttgccggatggtgcggcctgtcagaaacctgttctatggaaagaatgaatggattggt
actctggaacagatcttcatgaatgtggcctcgcaggagtcagaggtggtgcccggagtg
accactcatcaggaactcttccctcacagcattttgagcgtggtggccaacctcattccc
ttctctgatcacaaccaaagtccacgaaacatgtaccagtgccagatgggaaagcaaacc
atggggtttccagtttataactacaaggatcgctcggataacaagctgtaccaccttcac
actccccagagccctctggtgcggcccagcatgtacgactattatggtatggacagctac
ccagtcggcaccaatgccatcgtagctgtcatctcctacagcggctatgacatggaagat
gcaatgattgtgaataaatcttcctggcagagagggtttgcttttggaagtgttatcaag
atggagagcattgacctttcccttaaagccagcagggcaggtgataatttagtgtttggc
atcaggcctggtgatccaaacgtcatggagaagctggatgctgatggactgccttttgtt
gggtctattctacagcctggagacccattctacagcttcatgaacctcaacacaggggag
acctttacagtgtactatccgaataaggaagttggcattgtagacaacgtcagattatgc
agtaatgaccgtggcacgggaaaattcaagaaggcttgcatcactgtgagggttccccga
aatccaactgttggagacaaatttgccagccgccacggacagaaaggtatcctgagccag
ctctggccagttgaggatatgccatttacagagaatgggatggttccagacatcctcttc
aaccctcatggctttccctcccgtatgaccattggaatgttgattgagagcatggcgggg
aagtcggcagcactgcatggtgtctcctatgatgccactcccttcaccttcacagagaag
aagtctgccttgaaatacttcggtgagactttagtgagcgcaggttataacttctttggg
acagaaaagatgtacagcggcatcagtggcctggagctggaggcagagatctttgtggga
gtggtgtactatcagcgcctgcgccacatggtctcggacaaattccaggtgagaacaacg
ggaccccgagatgctgtcaccaaccagcccgtcaaggggaggaacgtggaaggtgggatt
cgctttggtgagatggagcgggatgctctgctggctcatggcacatctttcctgctgcaa
gaccgtctgttcaactgctctgatggctccatagcctacgtgtgcacaagctgtggcagc
atgacatctcctgtgctggagaaactgcccaactcctctctggcgagcagcaggaggtac
tcctgttcagtctgcagtgaggtggactccattgaggttgtccctgtgccccacgtcttc
cgttactttgtggcggagctggcagccatgaacataaaaacaaagctcaaggtggaatag
DBGET
integrated database retrieval system
