Empidonax traillii (willow flycatcher): 114067018
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Entry
114067018 CDS
T05887
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8 isoform X1
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114067018 (PRDM8)
03036 Chromosome and associated proteins [BR:
etl03036
]
114067018 (PRDM8)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114067018 (PRDM8)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114067018 (PRDM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
114067018
NCBI-ProteinID:
XP_027757976
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MVWVLVSCKKISVTLWWICKLIFLTGLCACLEGNRGEVRASSGLKEQPRYLWCLNCEKAE
GKGMEDAGVQRGIWDGDAKTVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAF
IALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSAREREEQNLEAYIKSGQLFYRSL
RRIAKDEELLVWYGKELTELLLLGPARAPARTNGSPPFACPECSQRFQFELPFAAHLRFR
CPKRLHGPDTGPAAEAAGGKDVAGKEQEPGKFGKPGGPPHHPFPGPDGGPTASTKPSTDF
HNLARELENSRGGRGGSPGRPALPEGGPEAAAGKAKRRFSDEEDRGPGAARGRFPAERPG
LPAAPKEEPGCAPQQQYRAAGSYCGLEEGGRLFAPPSPETGEAKRSAFVEVKKAARGPEP
DGGPEEGPERGSPGAGGAEPGLCPRGGAGGPLAARLDGGSPARGSAFSTVPQLGAGSGGP
GGGGAEERKSAFSQPSRSFPHVPPLVLGPKLGGLGEPCPDGAAAPARLYTTDALAAKLPG
GGEAAGGGGGGGGGLPKQSPFLYTTAFWPKSSAAAAVAAAAAGPLQLQLPSALTLLPPSF
TSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYALEPLVKRRREEKLKCPICNESFR
ERHHLSRHMTSHN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtctgggttttggtcagctgtaaaaaaatttctgtgaccctttggtggatatgcaaa
ttaatatttctcactggactctgtgcttgcttggaaggaaatagaggggaagttcgagca
tcatcagggctgaaggaacagccaaggtacctgtggtgtctgaattgtgagaaagcagag
gggaaagggatggaggacgccggcgtccagcggggaatatgggacggggacgccaagacg
gtccagcagtgcttgactgacattttcaccagcgtttacaccacctgcgacatcccggaa
aatgccattttcggcccctgcgtcctgagccacacgtccctctacgacagcatcgccttt
atcgccctcaagtccaccgataagcgcaccgtcccctacatattccgggtggacacgtcg
gcggcgaacggctcgtcggagggcctgatgtggctgcggctggtgcagtcggcccgggaa
cgggaggagcagaacctggaggcctacatcaagagcgggcagcttttctaccgctctctg
cgccgcatcgctaaggacgaagagctgctggtgtggtacgggaaggagctcaccgagctg
ctgctactcggtccggcccgggcccctgcccgcactaacggctcgccgcccttcgcctgc
cccgagtgcagccagcgcttccagttcgagctgcccttcgctgcacacctccggttccgc
tgccccaagaggctgcacggccccgacaccggccccgccgccgaggccgccggcggcaag
gacgtcgccggcaaggagcaggagcccggcaagttcgggaagcccggcgggccgccgcac
cacccctttcccggtcccgacggcggccccaccgccagcaccaagccctctacggacttc
cacaacctggcgcgggagctggagaattcccgcggcgggcgcggcgggtccccggggcgg
ccggcgctccccgagggcggtcccgaggcggcggccgggaaggcgaagcggcggttctcc
gatgaggaggatcgcgggcccggcgcggcgcggggccgcttcccggcggagcggccgggg
ctgccggcggcgcccaaggaggaaccgggctgcgccccgcagcagcagtaccgtgccgcc
ggctcctactgcgggctggaggagggcggccgcctcttcgcgccgcccagtccggagaca
ggggaggccaagcgcagcgccttcgtggaggtgaagaaggcggcccgcggccccgagccc
gacggcggccccgaggaagggccggagcgtggctccccgggggcgggcggcgcggagccg
gggctgtgtccccgcggcggcgccgggggtccgctggccgcccgcctggacggcggcagc
ccggcgcggggcagcgctttcagcacggtcccgcagctcggggccggctccggcgggccc
ggcggcggcggggccgaggagcggaaaagcgccttctcgcagccctcccgctccttcccc
cacgtcccgccgctggtgctgggcccgaagctcggcgggctgggcgaaccctgtcccgac
ggtgccgccgcccccgcccgcctatacaccaccgatgcgctggccgccaaactgccgggc
ggcggggaggcggcgggcggcggcgggggcggcggcggggggctgcccaagcagagcccc
ttcctctacaccacggccttctggcccaagagctcggcggcggcggcggtggcggcggcg
gcggcggggccgctgcagctgcagctgccgtcggcgctgacactgctgccgccgtcgttc
acctcgctgtgcctgccggcccagaactggtgcgccaagtgcaacgcgtccttccgcatg
acctcggacctggtataccacatgcgctcccaccacaagaaggaatacgctctggagccc
ctcgtcaagcgccgccgcgaggagaagctcaagtgccccatctgcaatgagtccttccgc
gagcgccaccacctctcccgccacatgacctcccacaactag
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