Empidonax traillii (willow flycatcher): 114067061
Help
Entry
114067061 CDS
T05887
Symbol
SH3RF2
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF2
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
etl01009
]
114067061 (SH3RF2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
etl04121
]
114067061 (SH3RF2)
Enzymes [BR:
etl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114067061 (SH3RF2)
Protein phosphatases and associated proteins [BR:
etl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114067061 (SH3RF2)
Ubiquitin system [BR:
etl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114067061 (SH3RF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_2
SH3_9
SH3_1
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-rbx1
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114067061
NCBI-ProteinID:
XP_027758046
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MDDLALLDLLECPVCFEKLDATAKVLPCQHTFCKPCLQRILKSQKELRCPECRTLVLCSI
EQLPSNLLLIRLLDGVRCGQNVTRFGSIQRSGVLSSPASIRRIPRGLQLHQHRLATNPRI
HMEGVPRARALYTYRGHNPGELRFNKGDIIVLLRQLDENWYLGEVNGISGVFPASSVQVI
KHLPLPQPLGRTLYSLDLRGRDKAENKDSLTFHKPNTTARQLLQTSKTHWSPQFKSASLR
TASPKAKGADSPAFPKVPDSRRKSLRQFSITTALNTLNRMVHAPAERPALEISSPVLISS
SNPTVATQSSEKAEFTYSTPVQVSTSYYPAPGPLGPSAAIVTLPHLQHHVPAYLCVALHS
YVPHGPDELELQKGEGVRVFGKDHDGWLRGMSLVTGRVGAFPSNYVAPLFRKSSLSDSKM
PSLYTSWTLSTSSLSSQGSISENGPRQSRALKPVLLPIPIPSPGRSTVGPAPLRRGRGSA
RKNGSLQRPGQAGTPVQITGSLRRPSAAAGRLQQFQIYPHISSPSHSVPPGAGTDEATRL
NFSHEASPALVIRGGESRTPSVCSSVILDAKDPPVKSEAAPKPPASAPPSILVKPETCRN
SAEKQVKTVRFQNHSPPPPKRHSLQPSPRLQRSRTEPEVLLPEAGLGPELLVLYSPRLGS
SPLHPRRALHPKALSLDLSGQLTFPVKKGYSSISAN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttggctctccttgacctgttggagtgtcctgtgtgctttgaaaagctcgat
gccacggcaaaggtgctgccttgccagcacaccttctgcaagccctgtctgcaaaggatc
ttgaaatcccagaaggagctccggtgccctgagtgcaggaccctcgtcctgtgcagcatc
gagcagctcccatccaacttgctcctcattcgcctgctggatggagtcaggtgtggacaa
aacgtcaccaggtttggctcaatccagaggtcaggggtcctgtcctctcccgcctccatc
aggagaatccccagggggctgcagctgcatcagcaccggctggcgaccaatcccaggatc
cacatggaaggggtgccacgagccagggccctgtacacctatcgtgggcacaaccccggg
gagctgcggttcaacaagggggacatcatcgtgctgctccggcagctggacgagaactgg
tacctgggggaggtcaacgggatcagcggcgttttcccagccagctccgtgcaagtcatc
aagcacctgcccctgccccagcccctcggcaggaccctctacagcctcgacctgcggggc
cgggacaaggcggaaaacaaggacagcctgaccttccataagcccaacaccactgcccgg
cagctcctgcagacctccaaaacccactggtcccctcagtttaaaagcgcgtccctgcgc
acggcgtctcccaaggcgaagggcgcggattcgccggcgttccccaaggtgcccgactcc
aggaggaagagcctgcggcagttctccatcaccacggccctcaacaccctcaaccggatg
gtccacgcgcccgccgagcgcccagccctggagatcagctcccctgtgctcatcagctcc
agcaaccccaccgtggccacccagagcagcgagaaagcagagttcacctacagcacccct
gtccaggtcagcacctcttactaccccgcaccaggaccactgggaccctcagcagccatc
gtcacccttccccatctgcagcaccatgtgccagcttacctgtgcgtggctctccactcc
tatgtgcctcatggaccagacgagctggagctgcagaagggagaaggggtccgtgtcttc
ggcaaggatcacgacggctggttaagaggcatgtccctcgtcacgggcagagtcggcgcc
ttccccagcaactatgttgctcccctcttcaggaaatctagtctctctgactcaaagatg
ccttccctgtacacttcatggacactgtcgacctcctcgctctcctcccaagggagcatc
tccgaaaacggcccgaggcaaagcagagccctgaagccggtgctgctgcccatccctatc
ccctcgccggggaggagcacggtgggaccggcacctctgcggcgcggccgcggcagtgcc
aggaagaatggatccctgcagaggccggggcaggcggggacccctgtgcagatcacgggc
tccctcaggcgtccttccgcggctgcggggcgacttcagcagttccagatatacccacac
atcagctccccgtcacacagcgtccctcccggagccggcacagacgaggcaacaaggtta
aacttctcccacgaggcttcaccggcgcttgtgatcaggggaggggagagtcggaccccc
tccgtgtgcagctcagtgatcctggatgccaaagaccctccagtgaagagtgaggcagct
ccaaagccgcctgcctcagcccccccgtccatcctggtgaaaccagaaacctgccgcaac
agcgccgagaagcaagtgaagacggtgcggttccagaaccacagccctccgccacccaag
cggcacagcctgcagccctcgccgcgcctgcagcgctccaggacggagccggaggtgctg
ctgcccgaagccggcctgggccccgagctgctggtgctgtactcgccccggctcggctcc
agccccctgcacccgcgccgggcactgcaccccaaggcgctgtcgctggacctctcgggg
cagctgaccttcccggtcaagaagggctacagcagcatctctgcaaactga
DBGET
integrated database retrieval system
