Empidonax traillii (willow flycatcher): 114067562
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Entry
114067562 CDS
T05887
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114067562 (TRPA1)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114067562 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
114067562
NCBI-ProteinID:
XP_027758909
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MKRSLLRLCRPRDKAAASSSYQGVACEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQIESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVAFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNRKIKDGEDIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEIYETRPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTTVPNPSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctccctgctgcggctctgccggccgcgggacaaggcagccgcctccagctcc
taccagggcgtcgcctgcgaggcggacgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctgcgcagcttcattaagaagaatcgttctggg
cttacaaaagtagatgagttaaatgccaccccgctgcatcatgctgcagaaggaggacaa
atagaactaatgcagttgatcatagacgactcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccagattgaaagtgttcgt
ctgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcataatgaaattgtgaagattttagtccagcacagcagt
acagatgttaatttggaaggtgaagcggggaacacacctataatcgtagcatgttacaag
gataatcctgaagcactgacactcctgattgaaaatggagggaaaatatgtaaaccgaac
aaaacaggatgtatgcctatccatgcagcggcattttcaggtgcaaaaacgtgtatggaa
attcttctaaaaaaaggtgaagaattgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtcctcttcatttggcagttcaaagtggggacctcgaaatgatt
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaactgagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtcgatgggaataaggaaacattgcttcacagg
acagcattgtttgatcattatgaactggcagagtacttgatttcaatgggagctaatatt
gatagcgttgacatagaaggtcgatccccgcttctgttggccacttcctgtgcatcatgg
aaaattgtgaatttactgctctcaaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgacagtattgcagcctggaggattacagcatctgaatgagaaa
tacctgcagatggaacatattaaaaatcttgtagtggatgaagataatgaaggatgcact
ccattgcattatgcatgcaggcaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcaccattacactttgctgccagc
tatgggcgcatcaacacatgtcaacgacttataagagatatgaaagacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcatttggcagctcagaatggtcatgag
aaggtagttcagtttcttctgaagaggggggcccttttcctctgtgattataaaggctgg
acagccctgcaccatgctgccttcggaggatacactcgcacaatgcagatcattttggat
accaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacctggct
gcacgagaaggacacgcaaaagcagtaagattacttcttgactatggtgcgaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagatgta
gtgtctgctgtcattctgcacaaaaggtgggaagaagctgttgtggcattctctcactat
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcatcattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatacaacttcagatatcttcagtgtccattgacacttaacaggaaaataaaggat
ggtgaagacattttctatgaaccacttaccactttaaatgccatggtacgccacaaccgc
atggagctactcagtcatcctgtgtgtaaagaatatttacttatgaaatggatggcctat
gggtttcgagcacatctaatgaatttaggcatatactctctcggtctcatcccactgact
cttctggtcactcacatacagccaggaagacctttgaatggaacagagatctatgaaaca
agaccactagaatatgaggactcatactttacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggaatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctactggactggacaatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttacagtgggaatgtggagcaattgctgta
tacttgtcctggatgaacttcttgctttaccttcaacgatttgaaaactatggcatctat
gtcgtgatgttctgggaaattttgagaactttgattcggatagctgtggttttctttttc
ctgatattggcctttggactgagtttctttgtccttttgggttcccagcaaacatatagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgctttcctggatcctttattaagcagtgaattaccatatccattcctgagttacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggatatcgctgaagtacaaaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcacaccaacttggagaagaagctaccgttttggttcttaagtcgagtggac
caggagtcaatcactgtatatcccaacaggccaagatactgtggatttatgagtgtgttc
cagtattgctttgggtgtgaagactctaccacatatgcacagagccctgatacgacatta
gaactagaagttctgaaacagaaatacaggctcaaagacatatcaacattgttggaaaag
caacatgacctcattaaattgattatccagaaaatggagatagtgtcagaagctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaaaaggcagttagagcataagaat
agtaaatgggatacagtgttaaaagctgttaaaacaactgtgcctaacccaagcacagaa
aagaacaacagcttcttctag
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