Empidonax traillii (willow flycatcher): 114067624
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Entry
114067624 CDS
T05887
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114067624
03036 Chromosome and associated proteins [BR:
etl03036
]
114067624
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114067624
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114067624
SLIK complex
114067624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CHD1-like_C
CDH1_2_SANT_HL1
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
114067624
NCBI-ProteinID:
XP_027758991
LinkDB
All DBs
Position
Unknown
AA seq
1791 aa
AA seq
DB search
MEDSFLSQLVSEPTRGGAPLDLLVTNTEGLVGDVVVGGCLGYSDHEMMEFSMLREAKRGI
SKTSTLDFRRADFSLFRMLIGRVLWETALKNKGIQEGWTYFKKEILKVQEQDVSMCQKPL
CNILLTSNCSQSDNDSGSASASGSGSSSGSSSDGSSSQSGSSDSESGSESDTSKEKKQVQ
AKPPPKVDGSEFWKSSPSILAVQRSTVLKKQQQQKAASSDSGSEEDSSNSEDSADDSFRE
AKKKKHRDEDWQMSGSGSVSGTSSDSESDEDREKSSYEDSESDYEPENKVKSQKPPSRIE
PKSSKKIAGQKKRQLDSSEDDDYDKRVSRRQATVNVSYKETEETKTDSDELLEVCGEDVP
QTEEDEFETIEKFMNSRIGRKGAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKF
QACIDEYFSRNQSKTTPFKDFKILKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLA
HSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWA
PQMNAVVYLGDITSRNTIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWIFIGV
DEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEVFEE
EHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRN
YKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNRQEALQHLIRSSGKLILL
DKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAE
GSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLV
TKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTILHTGSTPSSSTPFNKEELSAILKFGA
EELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIE
LEPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKRSRRR
RYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIAR
DAELVDKSEMDLRRLGELVHNGCIKSLKDNSFGQRAGGRFGKVKGPTFRISGVQVNAKLV
ISHEEELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWE
MIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRK
KTRSKNRASKAAKIKEETKSDSSSLPSENSDEDDEHNENKIVSVKRPHKKIKAKEENEEK
PEPDIGIKKEAEEKRETREKENKRNLKKEKKEKEDKKELKNIKEKRENKVKESMQKEKEV
KEEKVNEIKSENKEKNKKVSLLDIPVHITATSEPVPISDESEELDQKTFSVCKERMRPVK
AALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKF
TEFDARKLHKLYKHAIKKRQESQHNDQNISNNVNTHVIRNPDVERLKENTNHDDSSRDSS
SDRYLSQYHDHHKDRYQGDAYKKSDSRKRSYSGFSNGKDHRDWDHYKQDSRYYSDSKHRK
LDDHRSRDHRSNLEGSLKDSRPHSDHRSHSDHRIHSDHRFTSEYSHHKSSRDYRYHSDWQ
MDHRASGSGPRSPLDQRSPYGSRSPIGHRSPFEHSSDHKSTPEHTWSSWKT
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagcttcttgtcacagctggtgagcgagcctaccaggggtggggccccacta
gacctgctggttacaaacacagaagggctggtgggagatgtggtggtcggaggctgtctg
gggtacagtgatcacgaaatgatggagttctcaatgcttcgtgaagcaaagaggggtatc
agcaaaacctctaccctggactttcggagggcagacttcagcctattcaggatgctgatt
gggagagtactttgggaaacagcccttaaaaacaaagggatccaggaaggatggacatat
ttcaagaaggaaatcttgaaggtgcaggaacaggatgtctctatgtgccaaaagccatta
tgtaatatcctgttaacttctaattgcagccagtcggataatgattctgggtcagcatca
gcttctgggtccggttcaagttctggaagcagtagtgatggaagtagcagtcaatcaggt
agcagtgactctgaatctggttcagagtctgacacatctaaagagaagaaacaagttcaa
gctaaaccaccaccaaaagttgatggatctgagttttggaagtccagtccaagtatcctt
gctgtgcagagatcaacagtgctcaagaagcaacaacagcagaaggcagcctcatcagac
agtggttcagaagaggattcatcaaacagtgaagactctgcagatgactctttcagagaa
gccaagaagaaaaaacatagagatgaagactggcaaatgtctgggtcagggtcagtgtca
ggaactagttctgattctgaatcagatgaagatagagagaaaagcagttatgaagatagt
gaatctgactatgagccagaaaacaaggtcaaaagccagaaacctccaagcagaattgag
ccaaaaagcagcaaaaaaattgcaggacagaaaaagaggcagcttgattcctcagaggat
gatgactacgacaagagagtatctcgtcgccaggcaacagtcaatgttagttacaaagaa
actgaagaaaccaagacagattctgatgagttgttggaagtttgtggagaagatgtccca
cagactgaagaagatgaatttgaaactatagagaagtttatgaatagtcgaattggccga
aaaggagctcattcaaatcagaaatcagcagctggttatccagattactattgcaaatgg
caaggtctgccttactcagaatgtagctgggaagacggtgctctcattgccaaaaaattt
caggcatgtattgatgagtattttagcagaaaccagtccaagaccactccatttaaggac
ttcaagattttaaaacagagaccgaggtttgttgcgctaaagaagcaaccatcttatatt
ggaggacatgaaggtttagagttaagagattatcagttaaatggactgaactggcttgct
cactcgtggtgcaaaggaaatagttgtattcttgcagatgaaatgggtctgggtaaaaca
atacaaacaatttcttttctgaactacctgtttcacgaacatcaactgtatgggcctttc
ttgctagtcgtgccactttctaccttgacatcttggcaaagagaaattcaaacttgggct
cctcagatgaatgctgtggtttacttaggagatataactagcagaaatacgataagaact
catgaatggatgcatccacagaccaagcgattaaaatttaatatacttctaacaacttat
gaaattttgctgaaggataagtcattccttggtggtctgaattggatatttataggagtt
gatgaagctcatcgtttaaaaaatgatgattcccttctgtacaagactttaatagacttt
aagtctaatcatcgtcttcttattaccggaacccctctgcaaaactcccttaaagaactt
tggtctttgctgcacttcatcatgccagaaaagttttcttcctgggaagtttttgaagag
gagcacggcaaagggagagagtttggttatgcaagtcttcacaaagaacttgaaccattt
ttactcagaagagttaaaaaagatgtagaaaagtctttacctgctaaggttgaacaaatt
ttgaggatggaaatgagtgcattgcagaaacaatattacaagtggattttaaccaggaat
tataaagccctgagtaaaggttcaaaaggtagtacctcaggctttttgaacattatgatg
gaactcaagaagtgttgtaaccattgctacctcattaaaccaccggatgataatgaattc
tataatagacaggaggccttacagcatttaatacgtagcagtgggaaactaatccttctt
gacaagctactaattcgcctacgagaacgtggcaacagagtactgattttctctcagatg
gtgaggatgctagacatcctagcagagtatttgaagtatcgtcagtttccctttcagaga
cttgatggatcaataaaaggggaattgaggaaacaagcattggatcattttaatgcagaa
ggctcagaggacttctgctttttgctgtctaccagagctggaggattaggtataaacttg
gcatctgctgacactgtagttatatttgattctgattggaatccacagaatgatctgcag
gcacaggctagagctcataggattggacagaagaaacaggttaatatttatcggctagtc
acaaaaggatcagtagaagaagatattcttgaaagagccaagaaaaagatggtgttagat
cacttagtaattcagagaatggatactacagggaaaaccatactacatacaggttctact
ccctccagctcaacaccttttaataaggaagagttgtcagcaattttgaagttcggtgct
gaggaactttttaaagaacctgaaggggaagaagaggagcctcaggaaatggatatagat
gaaatcctgaagagggctgaaactcgagaaaatgaaccaggcccgctgactgtaggagat
gagttgctttcacagttcaaggtggctaatttttccaatatggatgaagatgacattgag
ttggaaccagaacaaaatttaagaaactgggaagaaatcattccagaagtccagcgtcga
cgaatagaagaggaggaaagacaaaaagagcttgaagaaatatatatgctcccaaggatg
agaaactgtgcaaaacagatcagctttaatggaagtgaagggaaacgcagtaggaggaga
agatattctggatctgatagtgactcagtctcagaaagaaaacgaccaaaaaaacgtgga
agacctcgaactattcctcgagaaaatattaaaggatttagtgatgcagagattaggcga
tttatcaagagttacaagaaatttggtggtccacttgaaaggttagatgctatagctaga
gatgctgagctagttgataaatctgagatggaccttagacgtctgggagaacttgtacat
aatggatgcattaagtctttaaaggacaattccttcggacaaagagcaggaggtagattt
gggaaagttaaaggcccaacatttcgaatatcaggagtgcaggtgaatgcaaagctagtc
atttctcatgaagaagagttggcaccattgcacaaatccattcctgcagatccagaagaa
aggaaaagatatgtcatcccatgccacaccaaggcagctcattttgatatagattggggt
aaggaagatgattccaatctgttaataggtatctatgaatatggctatggcagctgggaa
atgataaaaatggatcctgatctcagtttgacacagaagattttacctgatgatccagat
aagaaaccccaggccaagcagttgcagactcgtgcagattaccttattaaattactgaat
aaagaccttgcaagaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaag
aaaacaagaagtaagaatagagcatcaaaggctgcaaaaattaaagaagaaacaaaaagt
gactcctcatcactaccctcagaaaactctgatgaagatgatgagcataatgagaataag
attgtttcagtgaaacgtccacataaaaaaataaaagcaaaagaagaaaatgaagaaaag
cctgagccagatattggtataaagaaggaagctgaagaaaaaagagagacaagagaaaaa
gaaaacaagaggaatctgaaaaaggagaaaaaagaaaaagaggataagaaagaattaaaa
aatattaaagaaaagagagaaaacaaagtaaaagaatccatgcagaaagaaaaagaagta
aaggaagaaaaggtaaatgaaatcaaatctgaaaataaagaaaaaaataaaaaagtttca
ttgttggatattccagttcatattactgcaactagtgaaccagttccaatatcagatgaa
tctgaagaactggatcagaagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaa
gcagcattgaaacaattggatagaccagagaaaggtctttctgaaagggaacagctggag
catactagacagtgcctaatcaaaattggggaccacattactgaatgtctaaaggagtac
acaaatcctgaacaaattaaacagtggagaaaaaacttgtggatttttgtctctaagttt
acagaatttgatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgtcaa
gaatctcagcacaatgaccagaatattagcaacaatgtgaatacacatgtaattagaaat
ccagatgttgaaagactgaaggagaatacaaaccatgatgacagtagcagggacagttct
tctgatagatatttgtcacagtaccatgatcatcataaggacaggtatcagggagatgct
tataagaaaagcgactcaaggaaaaggtcctattcaggcttcagcaatggaaaagaccac
agagactgggatcactataaacaagacagcagatactatagtgatagtaaacatagaaag
ctggatgaccacaggagcagagatcacaggtcaaatctggaaggaagtttaaaagacagt
cggcctcattcagatcaccgttcccattcagaccacaggatacattcagatcaccgtttc
acttcagagtacagccatcataaatcttccagagattataggtaccactcagactggcaa
atggaccacagagcttctggtagtggcccaaggtcaccattagatcagaggtctccttat
ggttcaagatctcctataggacacagatctccatttgaacactcatcagatcacaaaagt
acacctgaacacacatggagtagctggaaaacataa
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integrated database retrieval system
