Empidonax traillii (willow flycatcher): 114067650
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Entry
114067650 CDS
T05887
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114067650 (ZC3H12B)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
114067650 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
114067650
NCBI-ProteinID:
XP_027759033
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEPPYFRSSCSTTQWRE
KEVSTKPHRPLCRSPCLDRPSFSQSSITQDLKVDECKTNLDKEYQAKMDFALKLGYAGDQ
IQTVLNKLGADALINDVLAELVRLGNKSESEGQSTASSTTSTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFMHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSLLSDFSNLSISSIRNSDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKSHRLPSQNRLQPFPHGYHEALNRVQSYGTEEPKQTLRKQSVSHL
GLNTQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRP
PLCREQHASWDPLPCASDSYAYHSYPLSNSLMQPCYEPVMVRSMPEKMEQLWRNPWIGIC
GEPREPHVIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAVIVAKLRTGC
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaaactgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgcgggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgagcctgaaccaccatacttcagaagcagctgtagcactactcagtggagagaa
aaggaggtttccaccaaaccacataggccactctgccggtccccttgtttggatcgccca
agcttttcacagagcagtatcacgcaagatttgaaggtagatgaatgcaaaacaaatctg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccagactgtactgaataaattgggagcagatgcactcatcaatgatgttctagcagag
cttgtgagacttggcaacaaaagtgagtcagagggacaaagcactgccagcagtaccacc
agtactctggtgccaagaggcccttgcccaaaggaaattgcaagccctgaattgtcactg
gaagatgaagttgtggataatagtgataacttgaggccaattgtcattgatggaagcaat
gtcgccatgagccatgggaataaagaaggattttcgtgccggggaattcaactagctgtt
gattggtttctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaa
gaacagtctcgacctgatgcaccaattacagatcaagaaatcttacgtaaattggagaaa
gaaaaaattcttgttttcaccccatctcgaagagttcaggggagaagagtagtttgctat
gatgatcgattcatagtaaaacttgctttcgactcagatggcatcattgtatcaaatgat
aactatcgggatcttcagaatgaaaaaccagaatggaagaagttcatagaggagcggctg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcttaagaaaaaggccagttattcctgaacataagaaacaa
ccgtgtccttatggtaaaaagtgcacctatgggcacaaatgtaaatattatcacccagaa
cgtgcaaaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagaaatcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagc
attaggtcagtagctgtggagcctgaggaaaagttatcagtagcccggaagtccgaggcc
agctctgtcccgtctctggtttctgcactaagtgtaccaacgctccctccaccaaaaagc
catgcagctggtgcattaaacactcgttctgcaagcagtccagtgccaggttcctcacag
ttcatgcatcagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccacggcacctcagttagctatactgaccagtatcccaaatatgagtca
ttgggggaccatggctattattccttactcagtgatttctccaacttgagcataagtagt
atccgtaactcagattattacggggctgatatggaccaggggatgtattctagaaactca
agcccctgtcctgacaattgcttaagccatacaagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagagccacagactg
ccatcgcaaaatcgtcttcagccttttccccatggttaccatgaagccttaaatagagtt
cagagttatggaactgaagagcctaagcaaacccttcgcaaacagtcagtttcccactta
ggcctaaatacccagcatccagttgttggagcacggtccagttgtccaggagaataccct
gtgcctcaaaatgttcatccatctactgcacaaccaagccgtgccttggtcatgacaaga
atggacagtatttccgactcgcggctttatgaaagtaaccccacacggcagagacggcca
cccctgtgccgagagcagcacgccagctgggatcccctgccatgtgcatcagactcctat
gcttaccactcctatccactgagtaacagtctcatgcagccttgttatgaacctgtaatg
gtgagaagcatgcctgagaagatggagcaactctggaggaatccctggattgggatatgt
ggtgagccacgggaacctcatgtcatcccagaacatcagtatcaaacatacaagaacctc
tgcaatattttccctccaagcattgtgctttctgtgatggaaaaaaatccccacatgaca
gatgcacaacaactggcagctgtgattgttgccaaattaagaacagggtgttaa
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