Empidonax traillii (willow flycatcher): 114067663
Help
Entry
114067663 CDS
T05887
Symbol
THBS2
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04145
Phagosome
etl04510
Focal adhesion
etl04512
ECM-receptor interaction
etl04518
Integrin signaling
etl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114067663 (THBS2)
04518 Integrin signaling
114067663 (THBS2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114067663 (THBS2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
114067663 (THBS2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114067663 (THBS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etl04131
]
114067663 (THBS2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etl04147
]
114067663 (THBS2)
00536 Glycosaminoglycan binding proteins [BR:
etl00536
]
114067663 (THBS2)
Membrane trafficking [BR:
etl04131
]
Endocytosis
Phagocytosis
Opsonins
114067663 (THBS2)
Exosome [BR:
etl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114067663 (THBS2)
Exosomal proteins of colorectal cancer cells
114067663 (THBS2)
Exosomal proteins of bladder cancer cells
114067663 (THBS2)
Glycosaminoglycan binding proteins [BR:
etl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114067663 (THBS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
Laminin_G_3
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
114067663
NCBI-ProteinID:
XP_027759052
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MLQRRRLLWLAVLITLWVSSNAQDGDKEEETTFDLLQVSNINRKTIGAKVFRGPDPTVPA
YRFIRFDHIPPCKPEKLKKIVRLIRQNEGFILSATLRQDRQSRGTILALEGPGIGERQFE
IISNGRANTLDLIYWVDGFQNVISLEDVDLADSQWKNLTMQITGENYNLYVGCDLIDSFI
LEEPFYEQLKAENSRLYVAKGSIRENHFRGLLQNIQLIFDTSIEDVLRKKGCQRSQSTEV
NTINESTEILHLSPAVTTEYVGEKPGKAEFCDRSCEELGSMFTELTGLRIVVNNLADNLQ
KVSEENQIMWELIGPNKTLKNQSVCWQDGRVFADNESWIVDSCTKCTCQDSKIVCHQITC
PAVSCADPSFVEGECCPVCSHSDDSEEGWSPWSDWTKCSVTCGSGTQMRGRSCDVTRSAC
TGPHIQTRMCSFKKCDHRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPIPQMGGKN
CVGNGRETEKCEKVPCPVNGQWGPWSPWSACTVTCGGGIRERSRLCNSPEPQYGGKPCVG
DTKQHDMCNKKDCPIDGCLSNPCFPGAECNSYPDGSWSCGPCPAGYLGNGTVCEDLDECI
AVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYKGSQPYGVGLEVAKTEKQVCEPENPCKDK
THSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNNNLVCAANATYHC
VKDNCPLLPNSGQEDFDKDGRGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKDEVGDR
CDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDGDGVGDQC
DNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHDQDGKGDA
CDPDDDNDGVPDDRDNCRLRYNPEQEDSDGDGRGDICKDDFDNDNVPDIYDVCPENNAIS
ETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGYDEFSSVDFSGTFY
VNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNSTTGTG
EHLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGLIKVLVYEGKQVMV
DSGPIYDTTFAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagaggagaaggctgttgtggcttgctgtcttgataaccctgtgggtttcctca
aatgctcaggatggtgacaaggaagaggagactacctttgatttacttcaagtcagtaac
ataaaccgaaagacaattggagcaaaagtgtttcggggtccagaccccactgtcccagcg
tatcgtttcattcggtttgaccatatacctccatgtaaaccagagaaattaaaaaagatt
gtcagactaatacgacagaatgagggctttatcctttcagccaccctgaggcaggacagg
caatccagaggcactatccttgctttagagggtcctggcatcggtgagaggcagtttgag
ataatttccaatggccgggccaacaccctggaccttatctattgggtggatggcttccag
aatgtgatttccctggaagacgtggaccttgctgactcacagtggaagaacctcaccatg
caaataacaggagagaactacaacctgtatgttggctgtgaccttattgacagcttcatc
ctggaggagcctttctatgaacaactgaaagcagagaacagcagactgtacgtggcaaaa
ggatccattcgggagaatcatttcaggggtcttttgcaaaatattcagttaatctttgat
acttcaatagaagatgttctacgtaaaaaaggatgccagagaagccagtcaactgaagtg
aacaccatcaatgagagcactgaaatccttcacttgagccctgcggtcacaaccgagtat
gtgggtgagaaaccaggaaaggcagagttctgtgaccgctcctgtgaggagctgggatca
atgttcacggagctcactggcctgcgcattgtggtgaacaacttggctgataacctccaa
aaagtgtctgaagagaaccaaattatgtgggaattgattgggcctaacaaaacactgaag
aaccagtcggtttgctggcaagatggtcgtgtctttgcagataatgaaagctggattgta
gatagctgcaccaagtgcacctgccaggattctaaaattgtgtgccatcaaatcacctgc
ccagcagtctcctgtgctgatccatcttttgttgaaggtgaatgctgcccagtctgctct
cactcggatgacagtgaggaaggctggtcaccgtggtcagactggacaaagtgctcggtt
acctgtggctctgggactcagatgcgaggaaggtcatgtgatgtcaccaggagcgcatgt
acaggtccacacatccagacaaggatgtgcagctttaagaaatgtgaccatcgcatacga
caagatggtggctggagtcactggtctccctggtcttcctgttcagttacctgtggagta
ggaaatatcacccgcatccgcctctgcaactctcctattccacagatgggtgggaaaaac
tgtgtaggaaatgggcgtgaaacagaaaagtgtgagaaggttccatgtccagtgaatggc
cagtggggtccttggtctccgtggtctgcctgcactgttacctgtggaggaggaattcgg
gagaggtctcgtctctgtaacagtccagagccgcagtatggaggaaagccatgtgtggga
gataccaagcagcatgatatgtgcaataagaaggattgcccaattgatgggtgtttgtca
aatccttgctttcctggagcagaatgcaacagttacccagatgggtcttggtcatgtggg
ccatgcccagcaggataccttggcaatggcactgtctgtgaggatcttgatgagtgtata
gctgtgtcagatgtctgctttaaagtgaatcaagtccatcgctgtgttaacacaaatcca
ggtttccactgcttgccttgtcctccacgctataaaggaagtcagccctatggagtaggg
ctggaagttgccaagacagagaagcaagtctgtgaacctgagaatccatgcaaggacaag
acacacagctgccacaagtctgctgagtgcatctatctgggccatttcagtgatccaatg
tacaaatgtgaatgcaggacaggttatgctggcgatggacgcatctgtggggaggattcg
gatttggatggctggcctaataataacttggtctgtgctgctaatgcaacataccactgt
gtgaaggataactgccctcttctgcctaactctggccaagaagactttgataaagatggc
agaggagatgcctgtgatgaggatgatgacaatgatggtgttgaagatgacaaagacaat
tgccctcttctcttcaaccctcgtcagtttgattatgacaaggatgaagttggtgaccgc
tgtgataattgcccctatgtgcacaaccctgctcagattgacacagataataatggggag
ggtgactcatgtgctgtggatattgacggagatgacattttcaatgaacgagataattgt
ccttatgtctataacactgaccagagtgatacagatggtgatggagttggtgatcagtgt
gataattgcccattgatgcataatccagaccagactgatgcagacaatgaccttgttggc
gaccagtgtgacaataatgaggacatagatgaagacggtcaccagaacaaccaggataac
tgcccttacattcccaatgctaaccaggctgaccatgatcaagatggtaaaggtgatgcc
tgtgatcctgatgatgacaatgatggtgtcccagatgacagggacaactgtcgcctcaga
tacaaccctgagcaggaggactcagatggtgatggcagaggtgatatttgcaaagatgac
tttgacaatgacaatgttccagatatttatgatgtatgccctgaaaacaatgccatcagt
gaaactgatttcagaaagttccagatggtccctctggaccccaagggaacagctcagatt
gatcccaactgggttattcgccaccaaggcaaagaactggtgcagactgccaactctgat
cctggaatagctgtaggctatgatgagttcagctctgttgacttcagtgggacattctat
gttaacacagaccgtgatgatgactatgctggctttgtgtttggttaccagtccagcagt
cgattttatgttctgatgtggaagcaggtcactcagacctactgggaggacaaacccacc
agggcttatggctattctggtgtgtcactcaaagtagtgaattcaacaactggtactggt
gaacacttacgaaatgctctctggcacacaggaaacacccctggacaggtgcgtactttg
tggcatgatcccaagaacattggctggaaagattatacggcttacaggtggcatttgatt
cataggcctaaaacaggattaataaaagttttagtgtatgaagggaaacaagtcatggtg
gattctggaccgatctatgacacaacttttgctggtggacgattaggtctttttgtcttc
tctcaagagatggtctatttctctgacctcaagtatgaatgcagagatgcttga
DBGET
integrated database retrieval system
