Empidonax traillii (willow flycatcher): 114068053
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Entry
114068053 CDS
T05887
Symbol
ARID1A
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114068053 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068053 (ARID1A)
03021 Transcription machinery [BR:
etl03021
]
114068053 (ARID1A)
03036 Chromosome and associated proteins [BR:
etl03036
]
114068053 (ARID1A)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Helix-turn-helix
ARID
114068053 (ARID1A)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114068053 (ARID1A)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114068053 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
114068053
NCBI-ProteinID:
XP_027759716
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAAAAERGEKQAESEGPSGKEL
QDGAESNGGGAGAESDLKSSNGNPGPRPAAAATLNNNLPEPPGGGGGGSDGVGAPQPPPP
QQQQQPPPSHPAALPPPAYGFGQPYGRGAAAAAFHQHGGQQSPGMAALQSGGLEQNYPGP
AGAPAGPPPPQNSHGAGAEHGFPNHQYNSYYAAGRSAGSYPPPPQAYALSSPRGSAPPAA
KSPAAAAAAAAFQQQQQQRFGVMGPSAAGGAGGGGTTPQPTATPTLNQLLTSPSSARAYQ
GYPGGDYSAGPQDGAAAAKGAADMVSQYGGGSGQGWGAAASGAPPRSHHAPMSPGSSGGG
GGGQTLGRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQ
RYPMGMQSRTQSTMGSISYAQQMPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQ
PPSQTPHSQPSYQQQQQPQSQAPQLQTSQPAYSQQQSQPPHQQSPTPYPQQQSTAQQHPQ
SQPPYSQQQSQSPYQQQQTQQSASSALSQQSSSYPQSQPPQPQSAYSQQRFPPPQELSQD
SFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGIS
SSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPR
PPSGQSDTILHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGP
YQQNSMGSYGPQGGQYGPQGGDXAQQRPLSVLTSCLXSPSLPRSIPGSVQVQAGWSPXXX
IPPGRMSHAAMGNRPYGPNMANMPPQVGTGMCPPPAGMNRKAQEAAAAAMHAAANSIQNR
PPGYPNMNQGGMMGTGPPYGQGINSMAGMMNPQGPPYPMGGNMANNSAGMAASPEMMGLG
DVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFT
EEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASS
LKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTS
SSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQ
PSMNTSDMMGRMSYEPNKDPYSGMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMA
MGQRQHYSYGGPYDRVRTEPGMGPEGNLGTGTPQPNIMPSTPESGMYSPSRYPQQQQQQQ
RHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGEMYNVPYS
AGQGQTQQQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAADRRAAGGPQNQFPFQFG
RDRVSAPPGSNAQQNMPPQMMGGPIQPAPEGPQQGAMWQGRNEMGYSFPNRPSTGSAPQG
PAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQN
HIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHVTPAAVQPPMIRRDIT
FPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNS
IMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEE
GEEDDEPRSLNCEEEEEDEEEEEAAFASKDKVPPESSEEKLVSKFDKLPVKVVQKNDPFV
VDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCSSALRKRSAA
ESNPSTREGEAPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESGKFPFVI
SPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSK
HPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVT
LANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLS
KLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAAR
AIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAK
VDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccatccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggtgaggcg
gcggcggcggagcgcggcgagaagcaggcggagagcgagggcccgtcggggaaggagctg
caggacggggccgagagcaacggagggggcgcaggggccgagtccgacctgaagagctcg
aacgggaacccgggccccaggcccgccgccgccgccaccctgaacaataacctcccggag
ccgcccggtggcggcggcggcggcagcgacggggtgggggcgccgcagccgccgccgccg
cagcagcagcagcagccgcccccttcccacccggccgccttgcccccgccagcctacggc
ttcgggcagccctacggccggggcgccgccgccgctgccttccaccaacatggcggacaa
caaagccctggcatggcagcgctgcagagcgggggcctggagcagaactacccggggccg
gcgggagcccccgcggggccgccccctccgcagaactcgcacggcgccggggccgagcac
ggcttccccaaccaccagtacaactcctactacgcggccgggcgcagcgccggctcctac
ccgcctcccccccaggcctacgccctgagctccccccggggctccgcgccgccggccgcc
aagtcccccgcggccgccgcggccgccgccgccttccagcagcagcagcagcagcgcttc
ggggtcatgggtccctcggccgccggcggcgcgggaggagggggcaccaccccgcagccc
acggccacccccaccctcaaccagctcctcacctcccccagctccgcccgcgcctaccag
gggtaccccgggggcgactatagcgccgggccgcaggacggggcggccgccgccaagggc
gccgccgacatggtctcgcagtacggcgggggcagcggccagggctggggagcagcggcc
agcggggccccgccgaggagccaccacgcgcccatgagccccgggagcagcggcggaggc
ggcgggggacagaccctcggcaggagccagcagccctcgagccccatggatcagatgggg
aagatgaggccacagccctacggagggaacaacccctacacgcaacagcagggacctcag
gcggggccacagcaaggacacggctacccaggacagccctacgggccccagactccccag
agataccccatgggaatgcaaagcaggacgcaaagtacgatgggcagcatctcatatgca
cagcagatgcctccctacgggcagcagggccccagcgcgtatgggcagcaaagccagact
ccctattacaaccagcaaagccctcacccccagcagcagcagcctccatactcccagcag
cctccatcccagacccctcactctcagccttcttatcagcagcagcaacagcctcaatcc
caagctccgcagctccagacatcgcaaccggcgtattcccagcagcaatcccagccgccc
catcagcagtccccgactccatacccccagcagcaatccacggcccagcagcacccccag
agccagcccccctactcccagcagcagtcacagtcgccgtaccagcagcagcaaacccag
caatcggcatcctcagccctctcccagcagtcctcgtcgtacccccagtcccagccgccg
cagccgcagtctgcgtactcccagcaacgcttcccccctcctcaggagttatctcaagac
tcatttgggtcccaggcatcatctgccccctcaatggcttccagtaaagggcaagaagac
atgaacttgaatcttcagtccagaccttccagcctgccggacctgtctggttccatagat
gatctgcccatgggtaccgaaggagccctgagccctggcgtaagcacatcagggatttcc
agcagtcaaggagagcagagtaacccagctcagtctcctttctcgccacatacctctcct
cacctgccaggcatcagaggaccctccccatccccagttggatctccagccagtgttgct
cagtcccgctccgggcctctctcacctgctgcagtaccaggcaatcagatgccgccccga
ccgcccagcggccagtcggacaccatcctgcatccttccatgaaccagtccagcatcgcc
caggatcgaggttacatgcagaggaacccccagatgccccagtacagctccccccagcct
ggctcagccttatccccccggcaatcctccgggggccagatgcacgccgggatggggccg
taccagcagaactccatgggaagctacggaccccagggcgggcagtacggacctcaaggt
ggggactgagctcagcaaaggcctctctctgtcctgacatcttgtctttgaagtcccagc
ttgcccaggtccatccctggaagcgttcaggtccaggctggatggagcccnnnnnnnngg
atccccccgggcaggatgagccacgcagccatggggaacaggccctacggacccaacatg
gcaaacatgcccccccaggtgggcacggggatgtgccccccgcccgccggcatgaaccgc
aaagcacaagaggcggccgccgctgccatgcacgctgctgccaactccatccagaacagg
cctcctggttatcccaacatgaaccaagggggcatgatgggcactggacctccttatgga
cagggaattaacagtatggctggcatgatgaacccccagggcccaccctaccccatgggt
gggaatatggccaacaactctgcagggatggcagcaagccctgaaatgatgggacttggg
gacgtcaaattaacacctgcaactaaaatgaacaacaaggcagacgggacgccaaaagca
gaatccaagtcaaagaagtccagttcctctactacaaccaatgagaagatcaccaaactc
tacgagctgggtggggagcccgagaggaagctgtgggtggatcgttacctggccttcacc
gaggagaaggccatgggcatgaccaacctcccagcagtgggcaggaaacccttggacctt
taccggctctacatctccgtgaaggagattggaggattgactcaggtcaacaagaacaag
aaatggcgcgagttggccacaaatctcaacgtgggcacgtccagcagtgcagccagttcc
ttgaagaagcagtacatccagtgtctctatgccttcgagtgcaagattgagcgaggagaa
gacccccctcctgatatctttgcagctgctgattcaaagaagtctcagactaagatacaa
cctccatctccagcgggttcaggctccatgcagggtcctcagacacctcagtccaccagc
agctccatggcagaaggaggagacttgaagccaccaaccccagcgtcgacgccacacagt
cagatgccccctttgccaggcatcaggagtaactctgtgggccttcaggatgcctttgca
gatggcagtgatcctacgttccagaaacggaactccatgactccaaatccagggtaccag
cccagcatgaatacctctgacatgatgggtcgcatgtcttacgagccaaataaagatccc
tacagcggtatgaggaaagctccaggaagcgatcccttcatgtcctcagggcagggcccc
aacagtggtatgggtgacccttacaaccgtgctgcaggcccagggatgggtaacatggcc
atgggacagcggcagcactactcctacggaggtccttacgacagagtgaggacggagccc
ggcatgggacctgagggcaacttgggaacgggaactccgcagccaaacatcatgccttcc
accccggagtcggggatgtactctcccagccgctaccctcagcagcagcagcagcagcaa
agacatgattcctatggcaatcaattctccactcaaggcacatcctcgggcagccccttc
ccaagccagcaaaccaccatgtatcagcagcagcagcagaactacaagcggccgatggac
gggagctacggcctgcccgccaagcgccacgaaggggagatgtacaacgtcccttacagc
gccgggcagggccagacccagcagcagctgcctccagcacagccccagcagcccagccag
cagcctcctgcacagccatccccccagcaggacctgtataaccagtatgggagcacgtac
cccgctgccgaccgccgagccgccggagggccgcagaaccagttccccttccaattcggc
agagacagggtctcggctcccccgggctccaacgctcagcagaacatgcctcctcagatg
atgggtggtcccatccagcccgctccggagggtccccagcaaggggccatgtggcagggg
cgcaacgagatggggtacagctttcccaaccggccgagcacgggctccgcgccccagggc
cctgcctatcacggagtgactcgaacagatgaaattctgcattcagaccagagggtcaac
cacgagggaccatggccttcccacgggaacaggcaacctccctacggtccctctgccccc
gtgcccccaatgaccaggcccccccagtctaactaccagaccccccccagcatgcagaat
cacattcctcaggtatccagcccagcacctctgcccagacctctggagaatcgcacttct
ccgagtaaatctccattcctgcactcggggatgaagatgcagaaggcaggaccacccgtt
cctgcctcacacgtaacaccagcagctgtccagcctcccatgatccgacgagacatcacc
ttcccgccgggatcagtagaagccacgcaacctgtgttgaagcagaggaggcggctaaca
gcaaaagatatcggaactcctgaagcctggagagtgatgatgtctctgaagtccgggctg
ctggctgaaagtacgtgggccttagataccataaacatcctgctctatgatgacaacagc
ataatgaccttcaacctcagccagctgccaggcttgctggagctcttggtggagtatttc
cggcgctgcctgatcgagatctttggaatcctgaaggagtacgaggtaggagacccaggg
caaagaacactattagatcccgaaaggttctgcaaatcttcagcttcttctcctgaagaa
ggggaggaggacgacgagccacggagcctgaactgtgaggaggaggaagaggacgaggaa
gaggaggaggccgcgttcgcgagcaaggacaaagtacctccggagagcagcgaggaaaaa
ctagtcagtaaatttgacaagcttccagtgaaggtggtgcagaaaaacgacccgtttgtg
gtagattattccgacaagctgggccgggtgcaggagttcgacagcgggctcctgcactgg
cggatcggcggcggagacaccaccgagcacatccagacccacttcgagagcaagacggag
ctgcccttgactcacaaacgagcttcctgctcctctgccttgaggaaacgttcagcagct
gagagcaaccccagcactagggaaggagaggcccctccgtccgacagctcctcggagaag
aggataactgccaccatggacgacatgctgtcggcgcgcccgggctccctggcaggggag
gaggaggaggtcaaagctttggaaacggcgaaggagagcggcaagtttccctttgtcatt
agtccagctcagagccacaggaatatcaaaatcctggaggacgaaccccacagtaaggac
gagacgccgctctgcaccctcctggactggcaggactctctggccaagcgctgcatctgc
gtctcgaacatcatcaggagtttatcgttcgtgccgggcaatgactttgaaatgtccaag
caccccgggctgctgctgattctagggaaactgatcctcttacaccacaagcacccagaa
cgcaaacaggcacccctgacctacgagaaggaggaggagcaggaccaaggggtgagctgc
aacaaggtggagtggtggtgggactgtttggagatgctgcgtgaaaatacactggtcacg
ttggccaacatttccgggcagctggacctctccccttacccggaaagcatctgtttgcct
atcctggatggactcctccactgggcagtgtgtccgtcagcagaggcccaggatcccttc
ccgacactggggcccaacgctgtcctctcccctcagagactggttttggaaacactcagc
aaactcagcatccaggacaacaacgtggatttgatcctggcgactccccccttcagccgc
ctggagaagctgtacagcaccatggtgcgcttcctcagtgacagaaagaacccggtgtgc
cgggagatggccgtggtactgctggccaacctggcacagggggacagcctggcggcgagg
gccatcgctgtgcagaagggcagcattggcaacttgctgggcttcctggaggacagcctg
gccgccacgcagttccagcagagccaggccgggctgatgcacatgcagaacccgcccttc
gagtcgacgagcgtggacatgatgcgccgagccgcccgggccctgctggccctggccaag
gtggacgagaaccactcggagttcacgttgtacgagtcgcggctgttggacatctccgtg
tcgcctttgatgaactctttggtttcacaagttatttgtgacgtactgtttttaattggc
cagtcatga
DBGET
integrated database retrieval system
