Empidonax traillii (willow flycatcher): 114068155
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Entry
114068155 CDS
T05887
Symbol
CTCF
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068155 (CTCF)
03036 Chromosome and associated proteins [BR:
etl03036
]
114068155 (CTCF)
Transcription factors [BR:
etl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114068155 (CTCF)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114068155 (CTCF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
114068155
NCBI-ProteinID:
XP_027759857
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MKRANQSRQKCRSNKNINQEGEMEGEAVEAIVEESETFIKGKERKTYQRRREGGQEDDAC
HLPPNQADGGEVVQDVSSGVQMVMMDQLDPTLLQMKTEVMEGAVPQETEATVDDTQIITL
QVVNMEEQPINLGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKAGLQEGEPMICHTL
PLPEGFQVVKVGANGEVETLEQGDLQPQEDPNWQKDPDYQPPAKKTKKNKKSKLRYTEEG
KDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRR
SNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELV
RHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHM
RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK
QHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHT
GEKPYACSHCDKTFRQKQLLDMHFKRYHDPTFVPAAFVCSKCGKTFTRRNTMARHADNCS
GLDGGEGENGGETKKGKRGRKRKMRSKKEDSSDSEENAEPDLDDNEDEEETAVEIEAEPE
VEQEAPAPPPSKKRRGRPPGKAATQPKQSQPAAIIQVEDQHTGEIENIIVEVKKEPDAET
AEEEEEAQPPVVEAPNGDLTPEMILSMMDR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcaaatcagtccaggcagaagtgcagaagcaacaagaacataaatcaggaa
ggtgaaatggaaggtgaggcagtcgaagctattgtggaggaatcagaaactttcataaag
ggaaaagagaggaaaacctatcagagacgccgtgaaggcggccaagaggatgacgcttgt
catctaccgccaaaccaggcagatggaggtgaagtagtgcaggacgtcagcagtggggtg
cagatggtgatgatggatcagctggatccaacccttcttcaaatgaagactgaagtaatg
gaaggtgcagtgcctcaagaaactgaggctacagtggatgacacacagatcataacactt
caggtggttaatatggaagagcagcctataaaccttggtgagcttcagctggtccaagta
cctgtgccagtgactgtacctgttgccaccacatctgtggaagaactgcagggagcttat
gagaatgaggtctccaaagcaggcctgcaagagggggagcccatgatctgccacaccctc
cctttgccagaaggcttccaagtagtgaaagtgggtgcaaacggtgaggtggagacgctg
gaacaaggtgatcttcagccacaggaagatcccaattggcaaaaagatccagactatcag
ccaccagccaaaaaaacaaagaaaaacaaaaagagtaagcttcgctacaccgaggaaggc
aaggatgtggatgtctctgtgtatgacttcgaagaggagcagcaggagggtttgttgtcc
gaggttaatgcagaaaaggtggtgggcaatatgaagccacctaaaccaaccaaaattaaa
aagaaaggtgtaaagaagacattccagtgtgaactgtgcagttacacttgtccgcgtcgc
tccaacttggaccgccacatgaaaagccacactgatgaaagaccacacaagtgccatctc
tgtggcagggctttccggacagtcacgttgctgaggaaccacctcaacactcacacaggt
actcgccctcacaagtgcccagactgcgacatggcctttgtgaccagtggagagttggtt
cggcatcgccgctacaaacatacccacgagaaacccttcaagtgttccatgtgtgattat
gccagtgtggaggttagcaaattgaaacgccacattcgttctcacactggggagcgcccg
ttccagtgcagcttgtgcagctatgccagcagggacacctacaaactgaagaggcacatg
aggacccactccggagagaagccatatgaatgttacatctgccacgctcgcttcacccag
agcggtaccatgaagatgcacattttgcagaagcacacggagaatgtggccaaattccac
tgtcctcactgtgatactgtcatagcgagaaagagtgacttgggtgtccacttgaggaag
cagcattcctacatcgagcagggcaagaagtgccgctactgcgacgccgtgttccacgag
cggtatgccctcatccagcatcagaagtctcacaagaacgagaagcgcttcaagtgtgac
cagtgtgattacgcgtgcagacaggagcgacacatggtcatgcacaagcggacccacact
ggagaaaagccttatgcctgtagccattgtgacaaaaccttccgccagaagcagctcctc
gacatgcacttcaaacgataccacgaccccacctttgtccccgctgccttcgtctgttcc
aagtgcggcaaaacgttcacccgcaggaacacaatggccagacatgctgataactgctct
ggcctagatggtggggaaggagagaatggaggagagacaaagaagggcaaacgtggccga
aagagaaagatgcggtctaagaaagaagattcctctgatagtgaggaaaatgctgaacca
gatttggatgataacgaagatgaggaggagacagcagtagaaattgaggctgaaccagag
gttgagcaagaggctcctgcaccacctcccagtaagaaacgaagaggaagaccaccaggc
aaagctgccacccaaccaaaacaatcccagcctgcagcaatcattcaggttgaagaccag
cacactggtgaaattgaaaatattatagttgaagtgaagaaagaacctgatgcagaaaca
gcagaggaagaggaggaagctcagcctcctgtagtggaagctcccaatggagacctcacc
cctgagatgattctcagcatgatggaccggtga
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integrated database retrieval system
