Empidonax traillii (willow flycatcher): 114068171
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Entry
114068171 CDS
T05887
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04010
MAPK signaling pathway
etl04210
Apoptosis
etl04218
Cellular senescence
etl04519
Cadherin signaling
etl04620
Toll-like receptor signaling pathway
etl04621
NOD-like receptor signaling pathway
etl04622
RIG-I-like receptor signaling pathway
etl04623
Cytosolic DNA-sensing pathway
etl04625
C-type lectin receptor signaling pathway
etl04920
Adipocytokine signaling pathway
etl05132
Salmonella infection
etl05164
Influenza A
etl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114068171 (NFKB1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
114068171 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
114068171 (NFKB1)
04218 Cellular senescence
114068171 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114068171 (NFKB1)
04621 NOD-like receptor signaling pathway
114068171 (NFKB1)
04622 RIG-I-like receptor signaling pathway
114068171 (NFKB1)
04623 Cytosolic DNA-sensing pathway
114068171 (NFKB1)
04625 C-type lectin receptor signaling pathway
114068171 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
114068171 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
114068171 (NFKB1)
05168 Herpes simplex virus 1 infection
114068171 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
114068171 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068171 (NFKB1)
Transcription factors [BR:
etl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
114068171 (NFKB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
RXYLT1_C
GloB_C
HEAT_PBS
Motif
Other DBs
NCBI-GeneID:
114068171
NCBI-ProteinID:
XP_027759892
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MAGEDSYIMGVSDPQMFAMDQFMGMNALFNSTNYITSDLPIRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVNAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
GYLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGGGGGAGSGFSYPSYGYSTFGGMHFHPG
TTKSNAGMKHEGLSHSSAEQSRKSSDKQSDKLDTKHDVKVETVERTACRMSADHEEKEGA
ASSCKTEVNETDFRWQDSLFLEKAMQLAKRHCNALFDYAVTGDVKTLLSAQRHLTAVQDD
NGDNVLHLAIIHFHTELVRNLLEVMQDLNYNDIINMRNDLYQTPLHLAVITKQAEVVEDL
LRAGADVSLLDRHGNSVLHLAATQGDDKILSLLLKHEKVSPMVNLSNAEGLSAIHMVVMA
NSMSCLKQLIAAGVNVNCQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTT
PLHIAAGRGSAKLTAVLKAAGANPHIENFEPLFDLDDVKDAEDDDEGIVPGTTPLDMAAN
CEVYDILNGKPYESTEVLEDLLTRGNLRELNESSKMQLYKLLESPDPTKNWSTLAQKLGL
GILNNAFRLSPSPSKTLLDNYEVSGGTVQELIAALRQMNHTEAIEVIQEALSISHSPSHL
EKSTAKALPSSSPLTFANGETGELYNSKFQDNESTCDSGVETSFRKLSFTYSDSLNSKSS
LTLSKMALGYGHESSVQSNYIAE
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgaagattcctatattatgggagtatctgatccccaaatgtttgcaatggat
cagttcatgggaatgaatgcattatttaatagcacaaattacatcacttcggacttgcca
atacgaacagcagacggaccgtatcttcaaatcatagaacagccaaaacagagggggttt
cgtttccgatacgtgtgtgaaggaccttcacacggtggattacctggtgcttctagtgaa
aagaacaaaaaatcttaccctcaggtcaaaatctgcaattacgttggacctgcaaaagta
attgtccagttagtaactaatgggaaatacgtccacttacatgctcacagcttggtgggt
aaattttgtgaagatggagtgtgcacagttaatgcaggacctaaagatatggttgtaggg
tttgcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaaccctggaaaca
cgcatgatagatgcttgcaagaagggttacaaccctggactcctggtgcatcctgaactc
ggctacctgcaggcagaaggatgtggagacagacagctaactgagcgagagagagaaatt
atccgccaggcagcgatacagcagactaaagaaatggatctcagtgtcgtgcgtctcatg
tttacagcctttcttcctgacagcaatggcagcttcacacggaaacttgatcctgttata
tcagatgcaatatatgacagcaaagctcccaatgcctccaacttaaaaatcgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttaccttctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggaa
ggctttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaacc
cccaagtatcgcgatgtcaatatcacaaagccggcgtctgtgtttgtgcaactgcgtagg
aaatcagatctggaaacaagcgaaccgaagcctttcctctactacccggaaattaaagat
aaagaagaagtgcagaggaaacgacagaagctcatgcctaacttctctgatggctatggt
ggaggcagtggcaccggaggtggtggcatgtatggagggggaggtggcggtgctggctct
ggcttcagttatccttcatatggatactctacttttggagggatgcatttccaccctggc
acaacgaagtccaatgctggaatgaaacatgaaggactatcacatagctcagctgaacaa
agcaggaagagctctgataaacaaagtgataaattggacacaaaacacgatgtgaaggtg
gaaactgtggagaggactgcgtgcagaatgtctgctgatcatgaggagaaagagggtgct
gcttcttcctgtaaaactgaagtaaacgaaacagatttcaggtggcaggattctctgttc
ctggagaaggccatgcagctcgccaagcgtcactgcaacgctctctttgattatgctgtg
accggagatgtgaagacgctgttgtctgctcagcgccatctcactgctgtccaggatgat
aacggagacaatgtccttcatttagcaattatccactttcatactgagctggtgagaaac
ctcttggaagtgatgcaggacttgaattacaatgacatcattaacatgagaaatgacctc
tatcagacccccttgcacttggcagtaatcacaaagcaggcagaggtggtggaagacctg
ctgagggctggagcagatgtcagcctcctggatcgccacggtaattctgtcttacattta
gctgctacccaaggagacgacaagatcttgagtctgctcctcaagcatgagaaggtatct
ccgatggtcaacctttccaatgctgaaggtctcagtgcaattcacatggtggtgatggca
aacagtatgtcctgcctcaaacagctgattgctgctggagttaatgtcaattgtcaggaa
caaaagtctggacggactgcattgcatttggctgttgaacaagagaacatccctttggca
ggctgccttttgcttgagggtgatgcagatgtggacagcactacatatgacgggacaact
ccacttcacatagcagctggaaggggctctgcaaaattgacagcagttctcaaagcagca
ggtgcaaatcctcacattgagaactttgagccactgtttgatctagatgatgtgaaagat
gctgaagatgatgatgaagggattgtgcctggaacaacaccgctggatatggcagccaac
tgtgaggtgtatgacatactaaatggcaaaccctacgagtcaacagaagttttggaggac
ttgctgacacgaggaaacttgagagagctgaatgaaagttccaagatgcagctttacaaa
ctattggaatcgcctgatccaaccaaaaactggtccactctagcacaaaaactaggtctt
ggcatacttaataatgccttcaggttgagcccttctccatcaaaaactctgctagataac
tatgaggtttctggtggtacagttcaggagttgatcgctgctttgagacagatgaatcac
acagaagccattgaagtaattcaggaagcactatccatctcacacagcccatctcacctg
gagaagagcacagcaaaagctcttccatcgtcatcaccactcacctttgcaaatggagag
acaggtgagctttataacagcaaatttcaagacaacgaaagcacatgtgacagcggcgtg
gagacctcattccgcaaactgagttttacttattctgactctctgaacagcaagtcatca
ctaacactgagcaaaatggccctgggctacggacatgaaagttcagtgcaaagcaattat
atagccgaatag
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integrated database retrieval system
