Empidonax traillii (willow flycatcher): 114068308
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Entry
114068308 CDS
T05887
Symbol
SHROOM4
Name
(RefSeq) protein Shroom4 isoform X1
KO
K18625
protein Shroom
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
etl04812
]
114068308 (SHROOM4)
Cytoskeleton proteins [BR:
etl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
114068308 (SHROOM4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASD2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
114068308
NCBI-ProteinID:
XP_027760098
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MERAEGRPGAPQYVHVQLQGGAPWGFTLRGGLEHGEPLIVSKVEDGGKAALSRRLQPGDE
LVNISGTPLYGSRQEALILIKGSYRTLKMIVRRRSVPVLRPHSWHVAKLAESRPDAPTMH
CPTDAFSLSWPSGCDVSELSLQWNPLSRHCSTDRSSSIGSMESLDHPSQAYYEGDPSPVD
QGMYHSKRDSAYSSFSASSIASDCALSLRPEEAVSSDSSFQGSCKAPDGRYLTTGAEPSA
SRHPEAWRAPVPPQPPVRRDSLRAAPGSRGDRHRASVSADMLHAKGRWISDTFLCQRDGE
AEAVGGRTLAPYPTKDRLSADQYYMLSSHPDRCPAEPLLGESMESDDRLYLDGSTHRVPD
ATTAGDNPLLSPLKGHVPHRHSAPEQLLASQLRSLQVGSSSERASPAPDGHRWTLSPLHP
EGSRGGTAGATQDPPLCPEPCCRPPPCHCCPEPQRACGQDSRGASPALSTEGPAEEESRA
GARRAGGPPHRSAQMRRRSDRFATSLRNEIQRRKAQLQKSRGPGAPPPGEEPVEETEEPP
ESSVPAEGPPALAERLSPAPSEDGRNAGRSGDRGIPTPDPLPAPKGPPSPERAVPTARGR
WRWSPERKLQPQRSPSPGELEGYSQGPVARSSPPRGIDEAVLLPFADRRRFFEESSRPAP
PQHSKPPVGDPGAFQSHGPEHRDVRRLSVDQPYSPPSPSRPGSAGPYAECCREQLPRYKP
LGRPGELDYVRGFSYPYGVPLRPEPCRYCGGDPCPPPLPRGHPCHCHPQPWARCPDCCCP
APRPGREESDAWPPRRAFAPEFPQGDWEPPAITRKVSQSVSELSHYQMGFQRLDPFHACF
ESAKPEWPPCYRATSTHDLSWDSERLARMPESPLDPLHRPLRGRAFSESHLNLEPASPQG
RDQKDLFRAKLDQPHVPKKKGPPPPRPPPPNWEKYRQRRASQHPPDGAGHGSAFAAPVPP
RSIADVVRERSQSLTGEQGGRSWGHAARPPAPPGAWPRPEPPGSLRRTPGPDVGNTENCR
VAGPGEKRPKAKQPWEMEEQPQRLIRNQERGCAGPCGLGECSPPLHGGPGPAMPEALKPS
PGAAEGVSCQGSRPQPHRVDSEEVLWDVAVRDHALANVHAPLAPFGTTTEVMGELLVSGE
RQAWRERLQRDWHLEALAQDRQGFEPISPPPGSVASSSSFPVHYGAAAGKAELLSKVMAL
PEVAEGSSEEEEEVDHELVEKKLQLIESLSRKLAVLREAQRGLQEDISANGALGEDVSAR
LQALCTPGEFDKYRLFVGDLDKVVNLLLSLSGRLARVEAALGSLGPHAPAEDKLALREKR
RLLVAQLEDAKELKEHVGRREEAVGAMVARYLPAEHLQDYQHFVKMKSALIAEQRELEEK
IKLGQEQLRCLRESLGQASKGC
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgagggccggcccggcgccccccagtacgtgcatgtgcagctgcagggg
ggcgcgccctggggcttcacgctgcgcggcgggctggagcacggcgagcccctcatcgtc
tccaaggtggaggatgggggcaaggctgcgctgtcccgccggctgcagccgggtgacgag
ctggtgaacatcagcgggacgccgctgtacgggtcccgccaggaggccctgatcctcatc
aagggctcctaccgcaccctgaagatgatcgttcgcaggaggagtgtgcccgtcctccgg
ccccattcctggcacgtggccaaactcgccgaaagccgccccgacgcccccaccatgcac
tgccccactgatgccttcagcctctcatggccctcggggtgtgatgtcagtgagctgtcc
ctgcagtggaacccgctgtcccggcactgcagcaccgaccggagcagctccatcgggagc
atggagagcctggaccaccccagccaggcctactatgaaggagacccctcacccgttgac
cagggcatgtaccacagcaagcgggactcagcctatagctccttctctgccagctccatc
gcctccgactgcgccctctccctccgccctgaagaggccgtgtccagtgactccagcttt
caaggctcctgcaaggcccctgacgggcggtacctgaccacaggggctgagccatctgcc
agccggcaccccgaggcctggcgggcgcctgtgcctccccagccccctgtcagaagggac
agcctgcgggcagccccaggcagcagaggggacaggcaccgggcgtcggtgtcagcggac
atgctgcatgccaagggccggtggatctccgacaccttcctctgccagcgggatggggag
gcggaggcggtgggcgggaggacgctggcgccgtaccccacgaaggaccgtctctctgct
gaccagtattacatgctgagctcccacccggaccggtgcccggctgagccgctcctgggg
gagagcatggagtctgatgaccggctgtacctggatggcagcacgcaccgagtgccggat
gccacgacagcaggtgacaacccgttgctgtcccccctcaaaggccacgtgccacaccgg
cacagtgctcccgagcagctgctggcctcccagctccgctccctgcaggtgggctccagc
agtgagcgagcctcgccagcccccgatgggcaccgctggaccttgtccccactgcaccct
gagggcagccgggggggaaccgcaggggctacccaggaccccccgctctgcccagagcct
tgctgccgcccgccgccctgccactgctgccccgagccgcagcgagcctgcgggcaggac
agccggggggccagcccggcgctcagcaccgaggggccagcggaggaggagagccgggca
ggggcccggcgggccgggggtcctccccaccgctctgctcagatgcgccgccgcagcgac
cgcttcgccaccagcctgcgcaacgagatccagcggcgcaaggcccagctgcagaagagc
cggggtcccggtgcccccccgcctggcgaggagccggtggaggagacggaggagccccct
gagagcagcgtgccggcagagggaccacccgccctggctgagcgtctcagccccgcgccg
agcgaggacggcaggaacgccggccgctcgggggaccggggtatccccacccctgacccg
ctgccagcccccaaagggcccccatctcccgagcgggcggtgccaacagccagaggccgc
tggcgctggtccccggagcgcaagctgcagccgcagcgctcgcccagccccggtgagctg
gagggctacagccagggcccggtggcccgcagctccccaccacggggcatcgacgaggcc
gtcctcctgccctttgccgaccgccgccggttctttgaggagagcagccggccggcaccg
ccccagcacagcaagcccccagtgggcgatcccggtgccttccagtcccacggccccgag
caccgcgacgtccgccgcctctcggtggaccagccttacagccccccgtcccccagccgc
cctggctctgccggcccctacgctgagtgctgccgggagcagctcccccgctacaagccg
ctggggaggccgggggagctggattatgtgcggggcttctcctacccctatggggttccc
ctgcgccccgagccctgccgctactgcggaggggacccgtgcccaccaccgctgcctcgc
ggtcatccctgccactgccacccccagccctgggcgcgctgccccgactgctgctgcccg
gccccccgtcctgggcgagaggagagcgacgcgtggcccccccggagagctttcgccccg
gaatttcctcagggtgactgggagccacctgccataaccaggaaagtcagccagtctgtc
agtgagctctcccactaccaaatgggcttccaaaggctcgaccccttccacgcctgcttt
gagagcgccaagccagagtggccaccctgctaccgggccacatccacgcatgacctctcg
tgggatagtgagcgcctggcccgcatgcctgagagccccctggacccgctgcaccgcccg
ctgcggggcagagccttctccgagagccacctcaacctggagcctgccagtccccagggc
cgcgaccagaaggaccttttccgtgccaagctggaccaacctcacgtccccaaaaagaag
ggccccccgcctccccgaccacctccccccaactgggagaagtacaggcagcgccgggca
tcccagcacccgccggacggtgctgggcacggctctgcctttgccgccccggtgccaccc
cgcagcattgctgatgtggtgcgtgagcggtcacagagcctcaccggggagcaggggggc
cggtcctgggggcatgctgctcgcccccctgctccaccaggtgcctggccccgtcccgag
ccccctggatcgcttcgcaggactcctgggcccgatgttggcaacaccgagaattgcagg
gtggcagggcctggggagaagcggccaaaggcaaagcagccctgggagatggaggagcag
ccccaaaggctcatccggaaccaggagcggggctgtgctggtccctgtgggctgggtgag
tgctcgccacccctgcatggtggccccggcccagccatgccagaggcactcaagcccagt
cccggggcagcggagggggtgagctgccagggcagccggccccagccccaccgtgtggac
tcggaggaagtgctgtgggatgtggcagtcagggaccacgccctggccaacgtccatgcc
cctttggccccctttggcaccaccactgaggtgatgggcgagctgctggtgtcgggggag
cggcaggcctggcgagagcgtctccagcgggactggcacctggaggccctggcacaggac
aggcaaggtttcgagcccatctcgccaccccctgggagtgttgccagctccagctccttc
ccggtgcactacggtgcagcagcaggcaaagctgagctgctcagcaaggtgatggcactg
ccagaggtagcagaggggagctcagaggaggaggaggaagtggaccacgagctggtagaa
aagaagctgcagctgatcgagagcctgagccgcaagctggcggtgctgcgggaggcacag
cgggggctgcaggaggacatcagcgccaacggggcactgggcgaggacgtgtctgcccgt
ctgcaagccctctgcaccccaggggagttcgacaagtaccgcctcttcgtgggcgacctg
gacaaggtggtcaacctcctgctctccctctcggggcgcctggcccgggtggaggctgcc
ctgggcagcctggggccgcacgcccccgccgaggacaagctggccctgcgggagaagcgg
cggctgctggtggcgcagctggaggacgccaaggagttgaaggagcacgtggggcggcgg
gaggaggcggtgggtgccatggtggcgcggtacctgcccgccgagcacctccaggactac
cagcactttgtcaagatgaagtcggccctcatcgctgagcagcgggagctggaggagaag
atcaagctgggccaggagcagctccggtgcctgcgcgagagccttggccaggcctccaag
ggctgctaa
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