Empidonax traillii (willow flycatcher): 114068359
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Entry
114068359 CDS
T05887
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
etl
Empidonax traillii (willow flycatcher)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
114068359
NCBI-ProteinID:
XP_027760170
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All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MAALLFPVQLLAVAVTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHMGKEMPHMQYGKEYPHLPQYMKEIPQRPMLGKDMAPKKEKEMPIRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGPPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQGLPGLPGPPGPPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGPVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPTVGQYLPEAGPGIEGVKPPYGYKGKK
GKAGGIVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAY
HVHCKGANVWVALFKNNEPLMYTYDEYKKGYLDQASGSAVVQLMPGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgctcttccctgtgcagctgctggcagtggctgtcaccgtttacctggag
ctcgtgaggtctgctcaaggaggtgcctactatgggatcaagcagctgccacctcaggtg
ccccagtaccaacctctcggacaacaagtacctcacatgccactgggcaaagaaggcatc
ccaatgcagcacatgggcaaggagatgccccacatgcagtacgggaaagagtacccccat
ctgcctcaatacatgaaggagatcccacagaggcccatgctcggcaaggatatggctccc
aagaaagagaaagaaatgcccatacgcagtctgaggggtgagcaaggcccccctggtgag
ccgggaccaagagggccaccggggccacctggattaccaggtcatggcgtgccaggagcc
aaaggaaaaccaggcccacaaggatatccaggaattggaaagccaggtttgccaggaatg
ccaggaaaaccaggggtcatggggcccccagggccaagaggggagatggggccaaagggg
gagattggacctatgggaatacccggaccacaaggaccaccaggacctcatgggcttccc
ggaataggaaaagcaggtcctccaggtttgcagggacagccagggccaaagggcgagcct
gggatgaaggggccaccgggaatccctgggatcccagggccaaaaggggagaagggcgtt
gggatcccaggtttgccaggtctgaagggtccacctgggctgcctggtccccctggcccc
gtggggctgccaggggtcggcaaaccaggcatggttggcttccctgggccacagggaccc
ctgggcaaacctggacccccaggagagttagggctgcaggggcctccaggggctcctggg
atccaaggccctcccggcccaccaggcattggcaaaccaggccaggatggcatgcctggc
cagccgggtttcccaggaggcaaaggagagcagggattgccaggcttgccagggcccccg
ggccccccaggggttggaaagccgggcttcccagggcccaaaggtgagcgaggtgtgggt
ggtctgcctggccccctggggccgaagggggagaaggggcacgcaggaccacctggcatg
ggggggccgccgggggagccaggccagccgggactgccaggcatcatgggaccaccaggg
gccgccggttttccaggacccaaaggagagggtggacccgtggggccaccaggaccggtc
gggcccaagggagaaccgggcctgcagggttttccgggaaagccaggttttccaggggaa
gtggggggccctgggctgcgggggctgccaggccccacagggcccaagggggaagcagga
cacaaaggcttgccggggctgccaggtgtcccagggcttgtggggccaaagggcgagccg
gggctccccggtgcccaggggcttcagggcccctcgggcatccccggcattgcaggaccc
agcggccccatcggccccccagggctgccgggggcaaagggggagccaggcatgcctgga
ccccctggtttccctggcgtaggcaaacctggggctgcagggttgcagggacccccaggg
aagcctggggcactcggtcctcctggccagccagggcttcaggggccaccgggccccccc
ggacccccaggtcccccggtcatcatcccacccactccaccaaccgtgggacagtatctg
cctgaggcggggccagggatagagggcgtcaagcccccctatggctacaagggcaagaaa
ggcaaggctggcggcattgtctacgagatgcctgcgttcacggcagagctgctcaccccc
ttcccccgggttggggtgcccgtgaagttcgacaagctcctctacaatggccggcagaac
tacaacccccagacagggatcttcacctgcgagatccccggcgtctactatttcgcctac
cacgtccactgtaaaggggccaacgtgtgggtggctctgttcaagaacaacgagccgctg
atgtacacctacgacgagtacaagaagggctacctggaccaggcttcaggcagtgccgtg
gtccagctgatgcctggagacaaggtttacgttcaaatgccatccgagcaggcagcggga
ctctatgctgggcagtacgttcattcatctttttcaggatatttattgtatcccatgtaa
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