Empidonax traillii (willow flycatcher): 114068377
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Entry
114068377 CDS
T05887
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114068377 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114068377 (EXOSC7)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114068377 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
114068377 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114068377
NCBI-ProteinID:
XP_027760202
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MASVVLSEAEKLYIVHGVQEDLRVDGRGCEDYRCAEVETDVVSNTSGSARVKLGDTDVLV
GIKAEMGTPKLEKPDEGYLEFFVDCSSNASPELEGRGGEELGTDIANTLYRVFSCENSVD
LKSLCINPREHCWVLYVDVLLLECGGNIFDAISIAVKAALFNTRIPKVRVLEDEEGTKEI
ELSDDPYDCIRLNVEEVPCIVTLSKIGYRHVVDATLQEEACSLASLLISVTSKGALTSMK
KVGKGSLDPESIFEMMETGQRVGKSLHIALQKILDEEESLGTSRPKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtggtgctgagcgaggccgagaagctctacattgtgcacggcgtgcaggag
gacctgcgtgtggatggtcgcggctgtgaagactacagatgtgcagaagtagaaacagat
gttgtatcaaacacaagcgggtctgcaagagtgaagctgggagacactgatgtcttggta
ggcataaaagctgaaatggggacaccaaagttagagaaaccagatgaaggttacctggaa
ttctttgttgactgttcttcaaacgcttctcctgaattggaaggccggggaggagaagaa
cttggcacagatatagcaaatacactgtacagagtatttagctgcgagaacagtgtagac
ttgaaatccctttgcattaatcccagagagcactgctgggttctctatgttgatgtattg
ttattggaatgtggtgggaacatctttgatgcaatctctatcgcagtgaaggcagctctc
tttaacacaagaatacccaaagtgcgtgttctggaggatgaagaaggcaccaaagagatt
gagctgtcggatgacccttacgattgtattcgacttaatgtagaggaggtgccctgtatt
gtcacgctgagcaaaattggatataggcacgtggtggatgctacccttcaggaagaagcc
tgttctttggcaagcctgcttatttctgtgaccagtaaaggcgccctcacttctatgaag
aaagtggggaaaggtagcctggatcccgagagtatttttgaaatgatggagacaggacaa
cgagtaggcaagtcactgcacatagcccttcagaagattttggacgaagaagagagtttg
gggacatcacggccaaaagttggatttctaggatga
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integrated database retrieval system
