Empidonax traillii (willow flycatcher): 114068498
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Entry
114068498 CDS
T05887
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etl03400
]
114068498 (PMS1)
DNA repair and recombination proteins [BR:
etl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
114068498 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
CHDNT
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
114068498
NCBI-ProteinID:
XP_027760445
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MKQLPGETIHLLSSSQVITSVVSVVKELIENSLDANSTSIDVKLDNYGFSKIEVRDNGSG
IKVEDVPVMAIKHYTSKISSSEDLERLSTYGFRGEALGSICSISEVLVTTKTADDDISTQ
YALNSNGHVTSKKPSHLGQGTTVTVLNLFKNLPVRKQFYSTSRKCKEELKKVQDLLTAYG
IIKPDLRVTLIHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEYPEINLSGFL
PKAESDSSLTSLSSSERSFIFINNRPVLQKEILKLIQQYYSMMTHKDCTRLYPVFFLNIT
VPASAVDVNVTPDKTQVLLHYKESVLLEVENVLKSLYGPLPAAVPGENNKTDVTSADMFV
HRTEQTDVVGNEMGPSGNDELHAHTSFLSLSSDVQNCQAVKNTEICLNHQTSCGDNVHSL
LDKREVSKSDAFPDSSLNLLCEDEQNGQNMTDIQRNSVPPDPKSKKADDEHLLSFDNTDQ
LDKNEEASVPKDLPEISADSWSMGSAFKDSLGDKLEPVKILIPEVGGTISKQKEYTAEQS
NDPQISNQSVKKKNVISEKFGHVTAYDLINSRIIKKAKSAFEIFTHECRPKLINDNPKTS
MADILLEIEEQWKNLSEEEKKNYELKATKDLERYNREVKKVSAHTGHRPAKETGKQKPKL
KSSAADQQKLDKIFHEQIEKKGKLEQPVKIVTVPFSLSSCRRHLQRREKDVSGEQELFLI
RRQSCPDVWIFATEKKLKLLNPYRLEEALLCKRLLMNHKLPVEKLDNPIVLSDSLIGGSQ
YMAALYKMQKNYQSFHGPGYLSDPRLVANGFQIKVIEGVSATESHLEIEGMANCLPYYGI
SDLKEILSAVVNGNAKEVYECRPLKVVNYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQ
LGKENKGCVHGRPFFHHLTDIPEVDKQSSMEIT
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgccaggagaaactattcatctcctttcaagttctcaggtgattacttca
gttgtcagtgtggtgaaggagctgatagaaaattccttggatgccaattccacaagtatt
gatgttaaactggacaattacgggtttagcaaaatagaagtaagagacaatggcagtgga
atcaaggttgaggatgttccagttatggccattaaacactacacctcaaaaataagctct
tctgaggaccttgaaaggttatcaacgtacggtttccgtggggaagctttgggatcaatt
tgcagcatatcagaggttttggtcacaaccaagacagctgatgatgacatcagcactcag
tatgctttgaatagcaacggtcacgtaacttctaaaaagccttcccatctaggacaaggt
accacagtaacagtcctaaatttgttcaagaatcttcctgtaagaaaacagttttactca
acaagtagaaaatgtaaggaagaactaaaaaaagtccaagatctactgacagcatatggt
atcataaaaccggacctgagagtaacattaatacataataaggcagttatttggcagaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcagcactgctgtgaatatcctgagataaatctttctggatttctc
ccaaaagctgagtcagacagttctttgacgagtctttcaagttcagaaaggagtttcatt
ttcataaataatcgtccagttcttcagaaggaaatactgaagttaattcaacagtactac
agtatgatgacacacaaggactgtactcgtttatatcctgttttctttttgaatattact
gtacctgcctctgctgtggatgtgaacgtaacgcctgataaaactcaagttttgctgcat
tataaggaatctgtcttacttgaggttgaaaatgtgttgaaatcactgtatgggccgcta
cctgctgcggtccctggtgaaaataataaaacagatgttacctcagcagacatgtttgtc
catagaacagaacaaacagatgtggttggtaatgaaatgggaccatctggaaacgatgag
ctccacgctcatacttcattcctttcactcagcagtgatgtgcaaaactgtcaagcagta
aaaaacacagagatctgcttaaatcatcagacttcttgtggtgataacgtgcacagtctc
ctggacaagagagaggtttctaagagtgatgcctttccagacagttccttaaatttattg
tgtgaggacgaacagaatggacaaaatatgactgatattcaaaggaacagtgttcctccg
gaccccaagtctaaaaaagccgacgatgagcatcttttgagttttgataatactgaccaa
ctagataaaaatgaggaagcctcagtccctaaagacttacctgaaatctctgctgatagc
tggagtatgggaagtgcatttaaagacagtctaggagacaaactggaacctgttaagatt
ttgattcctgaagttggaggaacaatcagtaagcaaaaagaatacactgctgagcaaagc
aatgatcctcaaatctcaaatcaaagcgtaaagaaaaaaaatgtgataagtgaaaaattc
ggacatgtgacagcttatgacttaattaatagcaggataataaagaaagcaaagtctgca
tttgaaattttcactcacgaatgtcgtccaaaattgataaatgataatccaaagaccagc
atggcagacattctgctggagattgaagagcagtggaagaatttgagtgaagaggaaaaa
aagaattatgaactgaaagccacgaaggacctggaacggtacaacagagaggtcaagaaa
gtcagtgcccacacagggcaccggccagcaaaggagacaggaaaacagaaacccaagcta
aagagttctgcagctgaccagcagaagcttgacaagatattccatgagcagattgaaaag
aaggggaaacttgaacagcccgtgaaaattgtgacagtgcctttttctctgagctcctgt
agacgacaccttcagagacgggagaaagatgtttcaggagaacaagagcttttcctgatc
cgtcgccagagttgtcccgatgtctggatatttgctactgaaaaaaagctgaagttgctg
aatccatacagattggaagaagccctgctatgtaaaaggttactgatgaaccacaagctg
ccagtagagaaactggacaatccaattgtgttatcggacagtcttattggtggatctcag
tacatggctgctctttataaaatgcagaagaattaccaaagtttccatggaccaggttat
ttatcagatccaaggcttgtagcaaatggatttcaaataaaagtgattgaaggtgtttca
gctacagaaagtcatctggaaatagaagggatggcaaattgtcttccatactatggtatt
tctgatttgaaagaaattctgagtgcagtagttaatggaaatgcaaaggaagtatatgaa
tgtaggcctctcaaagtggtaaattacttggagggagaagcagtccgtttagctcggcag
ctgcccttacatttgtcaaaagaagatgtacaaaacacaatttacaggatgaagcaacag
cttggaaaggaaaataaaggctgtgttcatggtcgtcctttttttcatcacttaacagat
attccagaagttgacaagcagagctccatggaaattacttag
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