Empidonax traillii (willow flycatcher): 114068520
Help
Entry
114068520 CDS
T05887
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114068520 (CHD6)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114068520 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HTH_Hrp3
DEAD
HDA2-3
MUN
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
114068520
NCBI-ProteinID:
XP_027760502
LinkDB
All DBs
Position
Unknown
AA seq
2772 aa
AA seq
DB search
MKEITFIPDLMIMKIQKKEKQGKSPGHRLSAEGKGPLTCLEPCSTCRAEIWLEPPTLKAL
SLSPMSSAWECKAQDTFASSEEQDEVPHQVTVTATNTGSQCQCPKEEPSGAPQKRTSTQN
GMQDSGGGGTGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKAKESKKPKEP
KQREVAKKPRKPREPKAPKEPKDKKSSTEPAPRARPKKSSKDTPVEKKKKGKRKNEIPAN
SLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGA
GRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLTFETEEFYVKYRNFSY
LHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTK
DPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMVTYPEERPA
SESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSE
IFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDSQGN
PLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHK
VLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRR
LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELR
KCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKV
LIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKAS
LKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQI
LQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKES
LVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEK
NLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPT
KDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHL
KQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEAD
KSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDSAERGSVEKE
ESNGEKLEGLPKQEDIVAAGVGEGSEKRDEPAAAQDGSDSDRSCWPVSSALTARLRRLVT
VYQRCNRKELPPRAEMLVPGNHGYWLQDEMFRRASEMDSVNKEMQKRWTRREQADFYRTV
SSFGVIYDQEKKVFDWSQFRAISRLEKKTDESLEKYFYSFVAMCKSVCGLPLWKEDGPPD
PDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHERLKLCRPSLYLPVWWECGKHDR
DLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGLPGPETLCCLYQTNSKLYSS
PLYSQVDRTCETLENEAESQIKLEAVDSTMSQAGGSTPDANCETFMSEVRDIISSNYDES
SLPESLVCMMYDEKACPSEQSSLARDSPSCTEVGSGVAKLSEGKLEGDEDPSSCDADAMR
EAPFLKGLQVGSDRMDSQNEEAEPSPSTPESNLSQSVPAELGKALEQKGALASPATGLPE
HGTVERVLSMGLYSSSLHNYELKVPPEQRFISLLQEKGMETKSGPSQSHSEEDEEEEEDD
DNSEAAADAVEGLSDPRTRANCEVNELGGEEQSSGLPTPEDTCPEDVNGEKEPPGLGEPG
PEGREDHGLDEERSGQHSAGQAQSQPFSLPTPLLGASGTEPLHAGGDAWGPGAEGQAGCT
EAPHPEPQGVKQEECENRDDREKASSSQSRDGPEKYLEEENKSSASVLPGEIDDLQDARA
PTIAQLLQEKTLYSFSEWPKDRVIINRIDNICHAILKGKWPSSSQQFEAQSLLTAPAVAS
NAGSRSSFAESEAPDPTFNNGVLLSQVPKEGFLSPAFTKDERKHRRPYEFEMERDAKQRS
LEQLAAAHVHSPIVLNGWREAAVDLSRASDGAPGNSSPFPLNTNMPKLGTVNALQGSLGM
DLSGILQAGLIHPVTGQIVNGSLRRDDAAMRRRRGRRKNVEGMDLIFLKERPLPNRLQDV
QEDQPQPPQNSPLPDGPVAATSTPQAVPAAGSQEKAVPNKSLLDWLRQQSDYTLDVPGFG
TNFSDKPKQRRQRCKDPSKLDISSLTGEERVPVVHKGTGRRLGGATAPALKELPRWLDAN
LEYAVAADWADIVKLSGYLPENKFNRVLTEPMLRDTGPRRRGRRPRSELLKGPGVVADSS
SGMGPLFMNGLIAGMDLVGLQNMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMM
LPGMATVPQMFGVGGLLNSPMTTTCTATAPTSLTSTTKGGTAGAEKASEEKQGGQDGKKE
PLAEDKPGPSSFSNQTESAITTSSPVAFNPFLIPGMSPGLIYPSMFLSPGIGMALPGIQQ
TRHSEAANLESQKRKRKKAKGELANPEPETVSLPEKEAANSQNCAEQSPPVAAEKEQDGP
AEEERQAAHDTD
NT seq
8319 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaataacattcatcccagatttgatgataatgaaaatacagaaaaaagaaaag
caggggaagagccctggccatcggctctctgctgagggaaaaggacctcttacatgcctg
gagccttgctctacctgcagggctgaaatatggctggagccgccgaccttaaaagcgctg
agcctctccccaatgtcgtctgcctgggagtgcaaggcacaggacacctttgccagcagc
gaggagcaggacgaggtgccccaccaggtgacagtgacggccacgaacacgggcagccag
tgccagtgcccgaaggaggagcccagcggggctccccagaagcggacaagcacccagaat
gggatgcaggacagtgggggcgggggcacaggggtgaagaagaaacggaagaaaaaggat
ctgggagagcaggaagggggagataaagcagctgtggaggtgaaaccaaagaggaggaga
gagcctaaagaaccaaaagagcctaaaaaggcgaaggagtcgaagaagccgaaggagccc
aaacagagggaagtggccaagaagcctcgcaaacctcgggaacccaaagccccgaaggag
cctaaagacaagaagagcagcaccgagcctgcccccagagcaagacccaagaagagcagc
aaggacacccctgtggagaagaagaagaaagggaagaggaaaaatgagataccagcgaac
agtttggatttggatcaggatctgctgagcccatccgtgcagagcccagaggagtctgca
gagtcagctgacagccagaaacgacgctcaggacggcaggtgaagaggaggaagtacaat
gaggacctggatttcaaggttgtggatgatgacggcgagacaatcgctgtgctgggagct
gggcgaacctccgcgctctctgcctctactctggcgtggcaggcagaggagcctcccgag
gatgatgccaatatcattgagaagatccttgcctccaggatggtgcagaaggaggctcat
cctggaggcctgacatttgagacggaggagttctacgtcaagtacaggaacttctcctac
ctccactgtaagtgggcaactctggaggagctggagaaggaccccaggatctcccagaag
ataaagcgcttccggaacaagcaggctcagatgaaacatatttttacagagcctgacgag
gatttgttcaacccggactacgtggaggtagatcggattctggaggtggctcatacaaag
gacccagacactggggaggaggtgactcactacctggtgaagtggtgctcgctgccctac
gaggagagtacctgggagctggaggaggatgtcgacccagggaagattaaagagttcgaa
gccctccagatccctcccgaaatcaagcacatggtaacgtacccagaggagcgcccagcg
tccgagtcctggcagaaactggagaagtcccgggagtacaagaacagcaaccagctgcgg
gagtatcaactggagggaatgaactggctgctctttaactggtataacaggaagaactgc
atcctggctgatgagatggggctggggaagacaatccagtcaatcaccttcctctcagag
atattcctgatgggcatccatggccccttcctcatcattgcccctctctccaccatcacg
aactgggagcgggagttccgcacgtggacggagatgaacgccatcgtgtaccacggcagc
cagatcagccggcagatgatccagcagtacgagatggtgtacagggactcacagggtaac
cctctccctgggatcttcaagttccaggtggttatcaccacctttgagatgatccttgcc
gactgcccggagctgaagaagatccagtggcgctgtgtggtcattgacgaggcacatcgg
ctgaagaacaggaactgcaaactcctggaggggctgaaactcatggccctggagcacaag
gttctgctgacagggactcccctgcagaactcagtggaggagctcttcagcctcctaaat
ttcctggagccacagcagtttccctcagagacagccttcctggaggagtttggagacctg
aagacagaggagcaggtgaagaagctgcagtccatcctgaagcctatgatgctgcgacgg
ctgaaggatgatgtagagaagaatctggcacccaaacaggagaccatcattgaggtggag
ctgaccaatatccagaagaaatactaccgggccatcctggagaagaacttctccttcctc
tccaagggtgccaaccagcacaatatgcccaacctcatcaacaccatgatggagctgcgc
aagtgctgcaatcacccctacctcatcaatggggcagaggagaagatcctggaagacttc
cgtaaaacacacagcccagaggcgccagacttccagctgcaggcgatgatccaggcagct
gggaagctggtgctcattgataagctgcttcccaagctgatcgctggtgggcacaaggtg
ctcatcttctcacagatggtgcgctgcctcgacatcctggaagactatctcatccagagg
cggtacacctacgagcgcatcgacgggcgggtgcgtgggaacctgcgccaggctgccatc
gaccgcttctgcaagcccgactcggaccgcttcgtctttctgctgtgcacgcgggcgggg
gggctgggcatcaacctgactgctgctgacacctgcatcatcttcgactcggactggaac
ccacagaacgacctgcaggctcaagctcgctgccaccggatcgggcagagcaaggcggtg
aaggtctatcgcctcatcaccaggaactcctacgagcgggagatgtttgacaaggccagc
ctgaagctgggcctggataaggctgtgctgcaggacatcaaccgcaagggcagcaccaac
ggggttcagcagctctccaagatggaggtggaggacctgctgcggaagggggcctacggc
gctctcatggatgaggaggacgaagggtcgaagttctgcgaggaagacattgatcagatc
ctgcagcgcaggacacagaccatcacaatccagtctgaggggaagggctccaccttcgcc
aaggccagcttcgtagcatcaggaaacaggactgacatttccttagatgaccccaacttc
tggcagaagtgggccaagatagcagagctcgatacagacgccaagaacgaaaaggagagc
ctggtcatcgacaggccccgggtgcggaaacaaaccaaacactacaactccttcgaagag
gacgagctgatggagttctctgagctggacagtgactcggacgagcggcccacgcgctcg
cggcgctttaacgagaagacgcggcggtacctgcgggccgagtgcttccgtgtggagaag
aacctgctcatatttggctggggacgctggaaagatatcctgacccatgggcggttcaag
tggcacctgaatgagaaggacatggagatgatttgtcgggccttgctggtgtattgcgtc
aaacactacaagggggatgagaagattaagagtttcatctgggatctcatcacgccgacc
aaggatggccagaaccaggctctgcagaatcactcaggtttgtcagcaccagtgcccagg
ggcaggaaggggaagaagacgaagaaccagatgctgcttcctgagataaagaacgcggac
tggctcgccacctgcaaccccgaggtggtcctgcatgatgacagctacaagaagcacctc
aaacagcactgcaacaaggttctgctgcgcgtgcgaatgctctactacctgaaggctgaa
gtgctgggggaggctgcggataaagcctttgaggggacccctgccagggagctggacgtg
ctgctgccagacattgactacgtggagatcccagtggactggtggaacgccgaagctgat
aaatccctgctcatcggcgtcttcaaacacgggtacgagcggtacaacgccatgcgggcg
gaccccgcgctctgcttcctggagaaggtgggcatgccggacgagaagctgctctctgcc
gagcagggcgtcagcgatggggcacaggactctgctgaaaggggcagcgtggaaaaagaa
gagagcaatggagaaaagctggaggggctgccaaaacaggaggacatcgtggctgctggg
gtgggtgaaggcagcgagaagcgggacgagccagcggcagcccaggatggctccgactca
gacagatcctgctggcctgtctcctctgctctcacggccagactgcggcgactcgtcacc
gtctaccagcgctgcaaccgcaaggagctgcctccccgcgccgagatgctggtgcctggt
aaccatggctactggctgcaggacgagatgttccggagagcctctgagatggactcggtg
aacaaagaaatgcagaaaaggtggaccaggagggagcaggcagatttctaccgcactgtc
tcctcctttggggttatctatgaccaggagaaaaaggtctttgactggtcccagttccga
gccatctctcgactggagaagaagacagatgagagcctggagaagtacttctacagcttc
gtggccatgtgcaagagtgtctgtggcctccctctgtggaaagaggatggtcctcccgac
cctgacatctacgtggagcccatcacggaggagcgtgctgcccggaccctgtaccgcatc
gagctgctgcgaaaggtgcgcgagcaggtgctcaagtgccctcagctccacgagcggctc
aagctgtgccggccgagcctctacctgccggtgtggtgggagtgtggcaaacacgaccgg
gacctgctgatcggcaccgccaagcacggcctgaaccgcaccgactactacatcatgaat
gacccccagctgtcttttttagatgcgtacaggaactatgcccagcataaaagaacaggg
ctcccaggcccagaaaccctgtgctgcctttaccagactaattccaaactctacagttcc
cctctgtacagccaggtggaccggacctgcgaaaccctggagaatgaagctgagagtcag
atcaagctggaagccgtggacagcaccatgtcccaggccggaggcagcacaccagatgca
aactgtgaaacgttcatgtctgaggtccgggacatcatttccagtaactacgacgagagc
tcgctgccggagtcgctggtgtgcatgatgtacgacgagaaggcgtgtcccagcgagcag
agctccctcgccagagacagcccaagctgcacagaggtcggaagcggcgttgccaaactc
tccgagggcaagctggagggggatgaggatccatccagctgcgacgcagacgccatgaga
gaggctcccttcctcaagggtttgcaggtgggctctgacagaatggacagtcagaacgag
gaagctgagccttcaccttccacccctgagagcaacctttcgcagagtgttccagccgag
ctcggcaaagccttggagcagaagggagccctcgccagcccggcgacagggctgcccgag
cacggcaccgtggaaagggtcctgagcatggggctctacagttccagtctccataactat
gaactaaaggttcctcctgagcagaggttcatcagtctgctgcaggaaaaaggaatggag
acgaagtcggggccgagtcagagccacagtgaggaagatgaggaggaagaagaggatgat
gacaactctgaggcagcagcagatgctgtggaaggcttgagtgatcccaggaccagggcc
aattgtgaggttaatgagctagggggtgaggagcagagctctggcctccccacacccgag
gacacttgcccagaagacgtgaatggcgagaaggagcccccgggactgggggagcccggg
ccagaaggcagggaggaccatggcttggatgaggagagaagtgggcagcactcagcaggc
caggctcagagccagcccttcagcctgcccacgcctctgctgggagcctcgggtacagag
cccctgcacgccgggggagacgcctggggcccaggggccgaggggcaggcaggctgcaca
gaggccccacaccccgagccccagggtgtgaagcaagaagagtgtgagaatagagatgac
agggagaaagccagcagcagccagagccgagatggtccagagaagtacttagaggaagag
aacaagagttctgcttctgtcctgcccggggagatcgatgaccttcaggatgcccgggca
ccaaccattgcccagctgctgcaggagaagacactttactccttctctgagtggcctaag
gaccgtgtgatcatcaaccgcattgacaacatctgccatgccatcctcaagggcaagtgg
ccttcctccagccagcagtttgaggcacagagcctgctgacagccccagccgtggccagc
aacgccggcagcaggagcagctttgctgagtcagaagcccctgatcccaccttcaataat
ggggtgttactctcacaggtaccaaaggaaggtttcctgagccctgccttcacaaaagac
gagcggaaacacaggagaccgtatgaatttgagatggagagagatgccaaacagaggagc
ctggagcagctggcagcagcccatgtccattcccccattgtgctgaacggctggcgcgag
gcagcggtggacttgtccagagcctctgatggggccccggggaactcttctcctttcccc
ctgaacacaaacatgcccaaactggggaccgtgaatgctctccagggctccctgggcatg
gacttgtctggcatcctacaggcagggttaatccatcctgtcacgggacagattgtaaac
ggcagcctccgaagagatgatgctgccatgaggaggagacgaggcaggaggaaaaatgtt
gaagggatggacctcatcttcttgaaggagaggcctcttccaaacaggctgcaggatgtt
caggaagaccagccacagccccctcagaacagtcctctccctgacgggccggttgctgct
acctcgactccacaggcagtcccagctgcaggcagccaagagaaggctgtccccaacaag
agtctgctcgactggctccggcagcagtctgactacacactcgatgttcctggctttggc
acaaatttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccagcaaattg
gacattagctcactgacgggagaggagcgggtgccggtggtacataagggtaccggacgg
cggttagggggagccacggcaccagcattgaaggaattgccaaggtggcttgatgcaaac
ttggagtatgctgttgcagctgactgggctgacattgttaagctttcaggctacttaccc
gaaaacaaattcaatcgcgtgctcaccgagcccatgctccgggacacggggccgcgccgc
agagggaggaggccccgaagcgaactccttaaaggccctggtgttgtagcagattcttct
tctggaatgggaccattgttcatgaacggactcattgctgggatggatctagtgggactt
cagaacatgagaaacatgcaagggatccctctgaccgggctggtcgggtttcctgccggc
tttgcagcagtgcccgctggggaggatgtgaagagcaccctgagcatgttgcccatgatg
ctgccgggcatggctactgtaccccagatgtttggcgttggaggacttctcaattccccc
atgacaacaacctgtactgcgaccgctccgacttcgttaacaagcacaacgaaaggtggc
acagccggcgccgagaaagccagcgaggagaaacagggcggccaggacgggaaaaaagaa
cctctcgccgaagacaagcccggtcctagttcattttctaatcagacagaatccgcaata
actaccagtagtcctgtagcttttaacccatttcttatcccagggatgtctcctggactg
atctatccctccatgttcctctcccccggcatcggcatggcgctgcctggcatccagcaa
accaggcactcggaggcggcaaacctggagagccagaagcggaagaggaagaaagcaaaa
ggggaattggcaaatccagagccagaaactgtctcactgccggaaaaagaagctgcaaac
agtcaaaactgtgcggagcagagcccgccagtggcggcagagaaggagcaggatggacca
gcagaggaggagcgccaggcggctcacgataccgattag
DBGET
integrated database retrieval system
