Empidonax traillii (willow flycatcher): 114068566
Help
Entry
114068566 CDS
T05887
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068566 (SOX1)
Transcription factors [BR:
etl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114068566 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
114068566
NCBI-ProteinID:
XP_027760589
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGGGNKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGY
AHMNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGAL
GSLVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQS
ASTGVNGTVPLTHI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccccggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggtggaggaggcggcggcggcggcggcggg
gggaacaaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcg
cggggccagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatcagc
aagcgcctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgac
gaggcgaagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccc
cggcggaagaccaagaccctgctcaagaaggacaagtactctctggccgggggactgctg
agcgccggctcggccgggggaggcccggccggtgtcggcgtgggcatgggcgtcggcgtc
agcccgggcggcgtcgggcagcggctggagagccccggcggcacggccagcggcggctac
gcgcacatgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcg
gcggcggcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagcgggggg
cacccgcaccacccgcacccccatcacccgcaccaccctcacaacccgcagcccatgcac
cgctacgacatgggcgccctgcagtacagccccatctccaactcgcagggctacatgagc
gcctcgccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggcg
gcggcagcggcggcagcggcagcggcggcggccgcctcctcgggggcgctgggcgccctg
ggctcgctggtgaagtcggaacccagcgtgagccctcccgtcacttcgcactcgcgggcc
ccgtgccccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggcggt
gatccggcagcagcagccgcccagagccggctccactccctgccccagcactaccagagc
gccagcacgggggtgaacggcaccgtccccttgacgcatatctga
DBGET
integrated database retrieval system
