Empidonax traillii (willow flycatcher): 114068749
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Entry
114068749 CDS
T05887
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114068749 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etl03041
]
114068749 (PRPF4)
Spliceosome [BR:
etl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114068749 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
PRP4
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
114068749
NCBI-ProteinID:
XP_027760905
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MAAARAPAARAGARPPEPPKAKPAEESDAPPAKRAPIFYGSLEEKERERLAKGETGLLGK
EGMKAALEAGNINISSGEVFDLEDHLSERQAEVLAEFERRKRARQINVSTDDAEVKACLR
ALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQTWYHEGPRS
LKTARLWLANYSLPRAAKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFCSQIGDDRP
LSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAVVFHPKATVSLDKKD
VSLASCAADGSVKLWNLESDEPMADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLE
AQEEILHQEGHSKGVYDIAFHTDGSLAGTGWVGLALGLAGTCSQGHHRASSWCLPGKIPR
DERPASNTEEYLITGSSGPSLDTS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcacgggcaccggcggcgcgcgccggggcccggccccccgagcctcccaag
gccaagcccgccgaggagagcgatgccccccctgccaagagagccccgatcttctatggg
agcctggaggagaaggagagggagagactggccaagggggagaccgggctgctgggcaag
gagggcatgaaggctgccctggaggctgggaacatcaacatcagcagtggggaggtgttt
gacctggaggaccacctgagcgagcggcaggccgaggtgctggcggagttcgagcggcgg
aagcgcgcgcggcagatcaacgtgtccacggacgacgccgaggtcaaggcctgcctgagg
gccctgggagagcccatcaccctctttggagaggggcctgcagagcgcagggagaggttg
agaaacatcctctcagtggttggcacagacgcgttaaagaagaccaggaaggatgatgac
aggtcaaaaaagtccaaagaagagtatcagcaaacctggtaccacgagggcccacggagc
ctgaaaacagccaggctgtggctggcaaactactccctgcccagggcagcgaagcggctg
gaggaggcccggctgctcaaggagatccccgaggccaccaggacatcccagaggcaggag
ctgcacaaatccctgcggtccctcaataacttctgcagccagatcggggacgatcgcccg
ctgtcctactgccacttcagccccaactccaagctcctggccacggcctgctggagtggg
ctgtgcaagctctggtctgtgcccgactgcaacctggttcacaccttgcgaggacacagc
accaacgtgggagcagttgtgttccaccccaaagccaccgtgtccctggacaagaaggac
gtcagcctggcctcgtgtgctgctgatggctctgtcaaactctggaacctggaaagtgat
gagcccatggcagacatcgaaggacacagcatgagagtggcccgtgtgatgtggcacccg
tcggggaggttcctgggcaccacctgctacgaccactcgtggcgcctgtgggacctggag
gcccaggaggagatcctgcaccaggaggggcacagcaagggggtctatgacatcgccttc
cacaccgacggctccctcgccggcaccgggtgggttggcctggcactggggctggctggg
acgtgttcccaagggcaccacagggccagctcttggtgcctccctgggaaaataccacgg
gacgagaggccagcaagtaacacagaagaatatttaatcacaggctcctctggtccaagc
ctggacaccagctaa
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