Empidonax traillii (willow flycatcher): 114068831
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Entry
114068831 CDS
T05887
Symbol
MED13
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114068831 (MED13)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
114068831 (MED13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
114068831
NCBI-ProteinID:
XP_027761030
LinkDB
All DBs
Position
Unknown
AA seq
2178 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILSSFSRC
LKADVLSVWRRDQRPGRRELWIFWWGDDPNFADLIHHDLSEEEDGVWENGLSYECRTLLF
KAVHNLLERCLMNRNFVRIGRWFVKPYEKDEKPINKSEHLSCSFTFFLHGDSNVCTSVEI
SQHQPVYLLSEEHLTLAQQSNSPFQVILSPFGLNGTLTGQSFKLSDSSTKKLIGEWKQFY
PVTSNLKEGSEEKQEEMDWEDDSLAAVEVLVAGVRMVYPACFVLVPQTDIPAPSTVGAPH
CSTTCLGVHQVPAATRDPAMSSVTLTPPTSPEEVQTVDAQSAQKWVKFSSVSDGFISDST
SHHGGKIPRKLANQVVDRVWQECNMNRAQNKRKYSATSNGLCEEETADKVASWDFVEATQ
RTNCNCSRHKNLKARNSGQQGQAPPAGPPAPAAPKHKATEKQDKGDKPQKRPLTPFHHRV
SVSDDVAMEADSASQRLVMAAPDSQVRFSTIRSSDVAKTPQLHNPELAGSPQPPPLSPHP
CDGVDEGVPKAPSTPQSQHFYQMPTPDPLVPSKAMEDRLDGLAQPFPAPFPEVIEPTVYV
GTAVNLEEDEADATWKYYKVPKKKDVDFLPPQLPNDKLRDDPVIPAGQENVTSVTELMVQ
CRKPLKVSDELVQQYQSKNQFLAAVATEADQEPEIDPYAFVDGDVEFLFPDSKKERQNIE
REAGKKHKAEDGTSSVTVLSHEGEDAMSLFSPSVKQDAQRVAAHARTASTSLFHETDLVV
SYTDLDNLFNSDEDELTPGSKRTVNGADDKSNCKEAKAGNLDPLSCISTADLHKMYPTPP
SLEQHIMGFSPMNMNNKEYGSMDATLGGTVLEGNSSTVGAQFRIEVDEGFCSPKPAEIKD
YSYVYKPENCQALVGCSMFAPLKTLPSQCLPPIKLPEECIYRQSWTVGKLDLLPAGPAMP
FIKDGDGSALDQEYGPAYTPQTHTPFGMPPSSAPPSNSGAGILPSPSTPRFPTPRTPRTP
RTPRGAGGPASAQGSVKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILS
ESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPTQEAQYRCTCGFSAVMNRKFGNSS
GLFLEDELDILGRNTECGKEAEKRFEALRATAIEHGGGGMKEPEKLPDELILLLQDQCTN
LFSPFGAADQDSVPKVGAAPSAVRVEERDCCNDCYLALEHGRQFMDNMSGGKVDEALVKT
TCLHHWSKRNVVDVSMQCSQDILRMLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLLGYDYDFLVLSPFALPYWERLMLEPYGSQRDVAYVVVCP
ENEALLNGAKSFFRDLTAIYESCRLGQHRPICKLLPDGIMRVGPTASKKLSEKLVTEWFS
QTANANNEAFSKLKLYAQVCRYELGPYLASQPLDNSLLSQTNLVPPCSQPGSALPPVPAG
AGNPNPPASAPAAATSSTITATSNSAMSSAATTANSTLTTTAPSSSSGSLGGGIAPSKPS
SFPPFSALSGGAAAALPTQAAPGQNGQAGGQQQQPLQAAAMAGDAAAAPAQTHPEVSEST
MDRDKVGVPTDGDSHAITYPPAIVVYIIDPFTYEKKDENSSSSSLWTLGLLRCFLEMVQV
LPPNIKNIISVQIVPCQYLLQPVKHEERQIYTQHLKSLAFSAFTQCRRPLPTSTNVKTLT
GFGPGLAMETALKSPDRPECIRLYTPPFILAPVKDKQTELGETFGEAGQKYNVLFVGYCL
SHDQRWLLASCTDLYGEQLETCIINIDVPNRARRKKGSARRLGLQKLWEWCLGLVQMSSL
PWRVVIGRLGRIGHGELKDWSCLLSRRNLQSLSKRLKDMCRMCGISAADSPSILSACLVA
MEPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSASVQVASSTY
TTENLDLAFNTNNDGADGMGIFDLLDTGDDLDPDIINILPASPGGSPVHSPGSHYPHGGD
MGKGQGTDRLLSTESHDEVTNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFL
KASLHLHVPSVQSDELLHSKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCL
PIHFVVLNQLYNFIMNML
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgagttcctgcttcgtgccgaacggggccagcctggaggattgccattccaacctcttc
tgcctggccgatctcaccgggattaaatggaagcgctacgtgtggcagggcccgacgtct
gcccccattctcttcccggtgacggaagaggatcccatcctgagcagcttcagccgctgc
ctcaaggccgacgtgctcagcgtgtggcgccgggaccagcggccggggcgccgagagctc
tggatcttctggtggggggacgaccccaacttcgctgacctgatccatcatgacctctca
gaagaggaagatggtgtctgggagaacgggctctcctacgagtgccgcactctgctcttc
aaggccgttcacaacctgctggagaggtgtctgatgaacaggaacttcgtgcgcatcggc
aggtggttcgtgaagccttatgagaaagatgagaaacccataaacaagagtgagcacttg
tcctgctccttcaccttcttcctgcacggggacagcaatgtgtgcacaagtgtggagatc
agccagcaccagcccgtctacctgctcagcgaggagcacctcacgctggcccagcagtcc
aacagccccttccaagtaatcctgagcccctttgggttgaatggcacactcacagggcag
tccttcaagctttctgattcatccacaaaaaagctcattggggaatggaaacaattctat
cctgtcacatccaacttgaaggagggatctgaggaaaagcaggaagaaatggactgggag
gatgattctttagctgctgttgaagtccttgttgctggggtgaggatggtgtacccggcg
tgcttcgtgctggtccctcagacagacatccctgcccccagcaccgtgggggcaccccac
tgctcaaccacttgcttgggtgtccaccaagtgcctgctgccaccagagaccctgccatg
tcctcggtgactctgaccccgccgacgtccccggaggaggttcagacagttgatgctcaa
tctgcccagaaatgggtgaagttctcctcggtttcagatggatttatctctgacagtacc
agccaccatggggggaaaatccccaggaaattggccaaccaagtggtggacagagtttgg
caggagtgcaacatgaacagagcccagaacaagaggaagtactctgctacatcaaatggc
ttgtgtgaggaggagacagctgacaaggtggcatcctgggattttgttgaagccacgcag
aggacaaattgcaattgttcaaggcacaaaaatctcaaagcgaggaattcaggtcagcag
ggccaggccccccccgcgggccccccggcgccggcggccccgaagcacaaggccaccgag
aaacaggacaaaggggacaagccccagaaacgccccctgactcccttccaccaccgcgtc
tccgtcagcgatgacgtcgccatggaggcagactcggccagccagaggctggtgatggct
gccccggacagccaagtgaggttctccaccatcaggagctcggacgtagcaaagacccct
cagctgcacaaccccgagctggccggttccccgcagccccccccgctcagcccgcacccc
tgcgacggcgtcgacgagggggtgcccaaagccccctccaccccccagagccaacacttc
taccagatgccaaccccggaccccctggtgcccagcaaggccatggaagacagactggat
ggtttggcccagcctttcccggctcccttccccgaggtcatcgagcccaccgtgtacgtc
ggcaccgccgtcaacctggaggaggacgaagccgacgccacttggaagtattacaaagtt
ccaaagaaaaaggatgtggacttcttgccaccccagcttccaaatgataagttgagagat
gatccagtaatacctgctggacaggaaaacgtaacatcggttacagaattaatggtgcaa
tgtaggaaacctttgaaggtttcagatgaactggtgcaacagtatcagagtaaaaaccaa
ttcctggcagctgtagcgacagaggctgaccaggagcccgagatcgatccttatgccttt
gtggatggtgacgtggaattcctgtttcctgacagcaaaaaggagaggcagaacattgag
agggaggccgggaagaaacacaaggctgaggatgggacatccagtgttacagttttatcc
cacgaaggagaggatgcaatgtctctgtttagtccttctgtcaagcaagatgcccaacga
gtcgctgcccacgcccgcactgcatcgaccagcctgttccacgagacagacctggtggtg
tcctacacagacctggacaatctcttcaactccgacgaagatgaactcacacctggatcc
aaacggacagtgaacggcgctgacgacaaatccaactgcaaagaggcgaaagcaggaaac
ctggaccctctgtcttgcataagcactgcagatctccataagatgtacccaactcctcct
tcgttggaacagcacatcatggggttttctcccatgaacatgaacaacaaggagtatggc
agcatggacgctacactgggaggaacagtcctggaagggaacagctccactgtgggagcc
cagttcaggattgaagtggacgagggtttctgcagccccaaacctgctgaaataaaggat
tactcttatgtctataaacctgagaactgtcaagctttagtgggatgttccatgtttgca
cccttgaagacacttcccagccagtgtcttcctcccatcaaactgcccgaggaatgcatt
taccgccagagctggactgtgggaaagctggatctgctccctgcaggccctgccatgcca
ttcatcaaagatggcgacgggagcgctctggaccaggagtacggccctgcctacaccccc
cagacccacactccgttcgggatgccccctagcagcgccccccccagcaacagcggcgcc
gggatcctcccctctccctccacccctcgcttcccgactcccaggacgcccaggacaccc
aggacgccgcgcggggcgggagggccggcgagcgcccagggctcggtgaagtacgagaac
tcggacctgtactcgcccgcctccaccccctccacctgcaggcccctgaactccgtggaa
cccgccaccgtgccttccatcccagaggcacacagcctgtacgtcaacctcatcctctcc
gagtccgtcatgaacctcttcaaggactgcaacttcgacagctgctgcatctgcgtctgc
aacatgaacatcaaaggcgccgacgtcggagtttacatccccgaccccacgcaggaggcc
cagtacaggtgcacctgcggcttcagcgccgtcatgaacaggaaattcggcaacagctcc
ggcctgttcctggaggacgagctggacatcctggggcgcaacacggagtgcggcaaagag
gcggagaagcgcttcgaggctctgcgggccacggccatcgagcacggcggcgggggaatg
aaggagcccgagaagctgcccgatgagttgatactgttgctgcaggatcagtgcaccaac
ttgttctcccccttcggagcggcggatcaagactccgtccccaaggttggggccgctccc
agcgcggtacgtgtggaagaaagggattgttgcaatgactgctacttggccttggaacat
ggacggcagttcatggacaatatgtcaggagggaaggttgatgaagcacttgtgaaaact
acttgcttgcaccactggtcaaaaagaaatgtggtggatgtgagcatgcagtgttcccag
gacatcctgcgcatgctgctgtcgctgcagcccgtcctgcaggacgccatccagaagaag
aggacggtccggtcctggggggtgcagggacccctcacgtggcagcagttccacaagatg
gctgggagaggctcctacggaacggacgagtccccggaaccactgccaatcccgacgttt
ttgctgggatacgattacgatttcctggtgctgtctccgttcgctctgccctactgggag
aggctgatgctggagccctatggatcccagagggacgttgcctatgtcgtggtgtgcccg
gagaacgaggctctgctcaacggagccaagagcttcttccgggatctcaccgccatctac
gagtcctgcaggctggggcagcacagacccatctgcaagctgctgcccgatggcatcatg
agggtcggccccacggcctccaagaagctgtcggagaagctggtgacggagtggttctcc
cagacagccaatgccaacaacgaagccttctccaaactcaaactctacgctcaagtttgc
agatatgagctgggtccttatctcgcttctcagcccttggacaactctttactctcccaa
accaacctggtccctccctgcagccagccaggctctgctctgccccccgtgccagccggc
gccgggaatcccaaccctccggcgtcggctcccgcagccgccaccagcagcaccatcaca
gcaacgtccaacagtgccatgtcctctgcagccaccacggccaattccacgctgaccacc
actgccccctcgtcctcctctggcagcctgggcggtggcatcgcccccagcaaaccctcc
tccttccccccgttcagcgccctgagcggcggcgccgcggccgcgctgcccacccaggct
gcgccggggcagaatgggcaggcaggggggcagcagcagcagccactgcaggcagcagcc
atggctggggacgctgctgcggctcctgcacagacacatcccgaggtttccgaaagcact
atggatcgtgataaagtcggagtccccacagatggagattcacatgctatcacttaccca
cctgcaattgtagtttacatcattgatcctttcacatatgaaaaaaaggatgagaacagc
agctcatccagtttgtggacacttggacttctgcgctgcttcctcgagatggttcaggtt
cttcctcccaacatcaagaacatcatttctgtgcagattgtcccatgtcagtacctactc
cagcccgtgaaacacgaagaacggcagatttacacccagcatttaaaatctttggcattc
tcagctttcactcagtgtcggaggcctctcccaacttccaccaacgtgaaaaccttgact
ggctttggcccgggtttggccatggaaactgccctcaagagccctgatagacctgagtgt
atccggctctacacccctcccttcatactggccccggtaaaggacaagcagacagaactg
ggagaaacctttggagaagctggccagaagtacaacgtgctttttgtgggctactgtttg
tcccacgatcagagatggcttcttgcatcctgcacggacctctatggggagcagttagaa
acctgcatcatcaacatcgacgtccccaacagagctcgcaggaaaaagggttctgcccgc
aggcttggccttcagaaactctgggagtggtgcctgggacttgtgcagatgagctctttg
ccatggagagtcgtaataggccgtttgggaagaataggacacggggaattaaaagactgg
agctgtttgctgagccgccggaacctgcagtccctgagcaagaggctcaaggacatgtgc
aggatgtgtgggatctccgctgcagactctcccagcatcctcagtgcttgcttggtggcc
atggaaccccagggatccttcattatcatgccagattcggtgtcgacgggctcggtgttc
gggcgcagcaccaccctgaacatgcagacgtcccagctgaacacgccccaggacacgtcc
tgcacccacatcctggtgttccccacgtctgcctccgtgcaagtggcatcctcaacttac
accaccgagaacctggacctggccttcaacacaaacaacgatggagcagatggaatggga
atctttgacttgttagacactggagatgatcttgatcccgatattataaatattcttcct
gcatcccctggtggatcccctgtgcattctccagggtcccactacccccacggaggtgat
atgggcaagggtcaaggcacagaccgattgctgtccacggaatcccacgatgaagtcacc
aacattctgcagcagccactggccctcggctattttgtgtcaactgccaaagcaggtcca
ttgcctgactggttttggtcagcgtgtcctcaagcacaaaatcagtgtcccttgttcctt
aaggcctctttgcacctccacgtgccttcagtgcaatcagacgagctactccacagtaaa
cactcccatccacttgattctaatcaaacttctgatgtgctcaggtttgttctggaacag
tacaatgcactctcctggctaacctgtgatcctgcaacccaggacagacggtcatgtctc
ccaattcattttgtggtgctgaatcagttgtataactttatcatgaatatgctgtga
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integrated database retrieval system
