Empidonax traillii (willow flycatcher): 114068834
Help
Entry
114068834 CDS
T05887
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etl03000
]
114068834 (SOX5)
Transcription factors [BR:
etl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114068834 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
114068834
NCBI-ProteinID:
XP_027761035
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVGEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQENCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPLKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEGTPESLAEKERQLMGMINQL
TSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQI
QQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAA
ATPGLGPLQLQQLYAAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSK
DEVAQPLNLSAKPKTSDGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARANTID
ILSSITSSGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKT
TLETLTQQLAVKQSEDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRP
MNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEK
YPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPG
AIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGIKGEEPHIKEEMQTDDVNGEIYDEY
DEEEDDPDADYGSDSENHIAGQAN
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgctaactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggga
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagaactgtggccat
aggactcccacttctcagcacaacacaatggaagttgatggcaataaagtgatgtcttca
tttgccccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagt
ggagagtcattgtccagcacagccctgggaaccccagaaaggcgcaaagggagcctagcg
gatgttgtagacacccttaagcaaagaaaaatggaagagctcatcaaaaatgagccagaa
gggactccagaaagccttgctgagaaagaaaggcagctcatgggtatgatcaatcagctg
accagtttgcgagaacagctgctagcagctcatgatgaacagaagaagctggctgcatca
cagatcgagaaacaacgccagcaaatggagctggctaagcagcaacaggaacagattgca
agacaacagcagcagcttctgcagcagcaacacaaaattaaccttcttcagcaacagatc
cagcaggtccagggtcagctgcctccattaatgattccagtatttcctccagaccaacga
accctagcagcagctgcacagcaaggattccttcttcctcctggtttcagctacaaagcg
ggatgcagtgacccctaccctgttcagctgatcccaactaccatggcagctgctgccgca
gcaacaccgggcttaggccctctccaactgcagcagttgtatgctgcccaacttgctgcg
atgcaagtgtctccgggaggcaagatacctggcataccccagggtaaccttggtgctgct
gtatcccctaccagcatccacacagacaagagcacaaacagccctccacccaaaagcaag
gatgaagtggcccagcctctgaacctttcagccaaacccaagacatctgatggcaagtct
cccacatcacccacctctcctcatatgccaactctgagaataaatagtggggccagttca
ctaaagtcttctgtgccagcaacattagctagtccttcggccagagctaacacaatagat
atcctttcttctatcacgtcgtcaggttatttaaatgaccacgatgctgttaccaaggca
atccaggaggcccgacagatgaaggagcagcttcggagggaacagcaggtgctggacggg
aaggtggccgttgtgaacagcctgggtctcaacaactgcaggacagaaaaggacaaaaca
acactggagaccctgactcagcagttggcagtaaaacagagtgaagacgggaagttcagc
cacgcgatgatggatttcaacatgagtggagattctgacggaagtgcaggagtctcagag
tctcgaatttatcgggaatccagagggcgtggtagcaatgaaccccatatcaagcgccca
atgaatgcattcatggtgtgggctaaagatgagcggaggaagatccttcaagccttccct
gacatgcacaactccaacatcagcaagatattaggatctcgctggaaagctatgacaaac
ctagagaagcagccatactatgaggagcaggcccgactcagcaaacagcacctggagaaa
tacccagactacaaatacaagccaaggccgaagcgtacctgccttgtagatggcaaaaaa
ctacgcattggcgagtacaaggctatcatgcgcaacagacgccaggagatgaggcagtat
tttaatgttgggcaacaagcacagatccccattgccaccgcgggcgtagtttacccagga
gccatcgccatggcaggaatgccttccccacatctgccctcggagcactcgagcgtgtcc
agcagcccggagcccgggatgcccgtcatccagagcacttatggcatcaaaggcgaggag
cctcatatcaaggaggagatgcagaccgacgacgtcaatggagaaatctacgatgaatac
gatgaggaggaggatgaccccgatgcggactatggcagtgacagtgaaaatcacattgcg
gggcaagccaactga
DBGET
integrated database retrieval system
