Empidonax traillii (willow flycatcher): 114068911
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Entry
114068911 CDS
T05887
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114068911 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114068911 (CSTF3)
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114068911 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
114068911
NCBI-ProteinID:
XP_027761146
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSGEGSAGDQTAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDGRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNTILNKAVKRSHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagaaggcagcgccggagaccagactgctgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactcgaagaaaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcccggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaa
gaaaaaatggctcaggcctatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaagcagtgggatcctat
gcagagaaccagaggataacagctgtccgtagggtttaccagcgtggctgtgtgaatccc
atgattaacatagagcagctctggagagattataacaaatacgaagagggcatcaatatt
cacttagctaagaagatgatcgaagacaggagtagagattatatgaatgcacgacgtgtt
gcaaaggaatacgagacggtgatgaagggcctggaccgcaacgctccctctgtgccccct
cagaacaccccgcaggaggctcagcaggtggacatgtggaagaagtacatccagtgggaa
aagagcaaccccctgcgaacagaagatcaaactctcatcacaaaaagagtgatgtttgct
tatgagcagtgtcttctggtgctgggccatcacccagacatctggtatgaggcagcacag
tacctcgagcagtccagtaagctgctggctgagaaaggggacatgaacaatgctaaactt
ttcagtgatgaggctgctaatatttatgagagagcgatcagcactttactaaagaagaat
atgcttctttattttgcatatgcagattacgaagagagtcgaatgaagtacgagaaggtg
cacagcatatacaaccggctgctggccatcgaggacatcgaccccaccctggtctacatc
caatacatgaagtttgcaaggagggcagaaggcatcaaatctggaaggacgatatttaag
aaggccagagaggacggccggacccggcaccacgtctacgtcacggcagctctgatggag
tattactgcagcaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaa
tatggggacattccagaatatgtgctggcgtatatcgactacctttcccaccttaatgag
gacaacaatacaagggttttgtttgaacgtgttttgacttcagggagccttccacctgag
aaatctggggaaatctgggctcgctttttagcctttgaaagcaacattggtgatttggcc
agcatactgaaagttgaaaagaggaggttcacagccttcaaggaagagtatgagggcaaa
gaaacagctctgctggtggacaggtacaagttcatggatttgtacccttgctctgccagt
gagctcaaggcccttggttataaggacgtgtcccgtgccaagctggcagcgataattcca
gaccccgtggttgcaccttccatcgtgcctgttctcaaggatgaagtggacaggaaaccc
gaatatcccaaaccagacactcagcaaatgattccatttcagccaagacacttagcacct
ccaggtttgcatcccgtcccaggtggtgtatttcctgttcccccagcagctgtagttctc
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatattcagaagatgcaaactgccagacactgtcgatgaagccgtgcggatcatt
acggggggcctgcctgaaatagccgtggagggcaatgggcccgtggagaacaacaccatc
ctcaacaaggccgtgaagagatcacacgaggattccgatgacgacgaggagaaaggatct
gtggttccccccgtccatgacatttacagagcgcggcagcagaagagaatccggtga
DBGET
integrated database retrieval system
