Empidonax traillii (willow flycatcher): 114069045 Help Entry 114069045         CDS       T05887                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism etl  Empidonax traillii (willow flycatcher) Pathway etl04510   Focal adhesion etl04512   ECM-receptor interaction etl04518   Integrin signaling etl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:etl00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     114069045 (COL1A1)    04518 Integrin signaling     114069045 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     114069045 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     114069045 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:etl00536]     114069045 (COL1A1) Glycosaminoglycan binding proteins [BR:etl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114069045 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd TILa Motif Other DBs NCBI-GeneID:  114069045 NCBI-ProteinID:  XP_027761390 LinkDB All DBs Position Unknown AA seq 1453 aa AA seqDB search MFSFVDSRLLLLIAATVLLTRGQGEEDIQTGSCVQDGLTYNDKDVWKPEPCQICVCDSGN ILCDEVICEDTSDCPNAEIPFGECCPICPDTDASPVYPESAGVEGPKGDTGPKGDRGLPG PPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQMSYGYDEKAGGMAVPGPMGPAGPRGLPG PPGAPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGPPGPQG ARGLPGTAGLPGMKGHRGFSGLDGAKGEPGPAGPKGEPGSPGENGAPGQMGPRGLPGERG RPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAAGAKGETGPQGARGSEGPQGARG EPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKG NTGEPGAPGNKGDTGAKGEPGPAGVQGPPGPAGEEGKRGARGEPGPAGLPGPAGERGAPG SRGFPGADGIAGPKGPPGERGSPGPVGPKGSPGEAGRPGEPGLPGAKGLTGSPGSPGPDG KTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGAPGPPGAVGAAG KDGETGAQGPPGPTGPAGERGEQGPAGAPGFQGLPGPAGPPGEAGKPGEQGVPGDAGAPG PAGARGERGFPGERGVQGPPGPQGPRGANGAPGNDGAKGDAGAPGAPGNQGPPGLQGMPG ERGAAGLPGAKGDRGDPGPKGADGAPGKDGLRGLTGPIGPPGPAGAPGDKGEAGPPGPAG PTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGETGDAGAKGDAGPPGPAGPTGAPG PAGAVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNIGLPGPPGPSGKEGGKGPRG ETGPAGRPGEPGPAGPPGPPGEKGSPGADGPIGAPGTPGPQGIAGQRGVVGLPGQRGERG FPGLPGPSGEPGKQGPSGSPGERGPPGPMGPPGLAGPPGEAGREGAPGAEGAPGRDGAAG PKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPQGPAGPPGPAGARGPAGPQG PRGDKGETGEQGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAAG KDGLNGLPGPIGPPGPRGRTGDVGPAGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHD GGRYYRADDANVMRDRDLEVDTTLKSLSQQIENIRSPEGTRKNPARTCRDLKMCHGDWKS GEYWIDPNQGCNLDAIKVYCNMETGETCVYPTQATIAQKNWYLSKNTKEKKHVWFGETMS DGFQFEYGGEGSNPADVAIQLTFLRLMSTEAAQNITYHCKNSVAYMDQDTGNLKKALLLQ GANEIEIRAEGNSRFTYSVTEDGCTSHTGAWGKTVIEYKTTKTSRLPIIDLAPMDVGAPD QEFGIDIGPVCFL NT seq 4362 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggattctcggttactgctgttgatagcagcaactgtactactcacc cgcgggcaaggagaagaagacatccaaactgggagctgcgtccaggatgggctaacgtac aacgacaaggatgtgtggaaaccagaaccctgccaaatctgcgtctgcgacagcggcaac atcctctgcgacgaggtgatctgcgaggacacctctgactgccccaacgccgagatcccc tttggagaatgctgccccatctgtcccgacaccgacgcctctcctgtctacccagaaagt gctggagtagagggtcctaaaggagacaccggccccaaaggagacaggggactccctggc ccccctggcagagatggcatccctggacagcctggtctcccgggacccccaggccctcca ggccccccaggcctcggcggaaacttcgctccccaaatgtcctatggctacgatgagaaa gccggggggatggccgtgcctgggcccatgggcccagccggtccccgtggtctccccggc cctcccggtgctcctggtcctcaaggtttccaaggtccccctggtgaacctggagagcct ggtgcttctggtcccatgggtccccgtggtcccgccggcccccctggcaagaacggagat gacggtgaagctggaaagcctggccgccccggagagcgtggtccccccggcccccagggt gcccgtggtctcccaggcactgctggcctgccaggcatgaagggacacagaggcttcagt ggtctggatggcgccaagggtgagcctggacctgctggtcccaagggtgagcctggtagc cctggagagaatggtgctcctgggcagatgggtcctcgtggtcttcctggcgagagaggc cgtcctggtccatctggccccgctggcgctcgtggcaacgatggtgctcccggtgctgcc ggtccccccggtccaactggtcctgctggtccccccggcttccctggtgctgctggtgct aagggtgaaaccggtccccagggagctcgtggcagtgaaggtccccaaggtgcccgtggt gagcctggtccccctggccctgctggtgctgctggtcctgctggcaatcctggtgctgat ggtcaacctggtgccaagggtgcaaccggtgctcctggcattgctggtgctcctggcttc cccggtgcccgtggtccctccggaccccagggtcccagcggtgcccctggtcccaagggt aacactggtgagcccggtgctccaggcaacaagggtgacactggtgccaaaggcgaaccc ggtcccgctggtgtccaaggtccccctggccctgctggtgaggaaggcaagagaggagct cgtggtgagcccggccccgctgggcttcccggccctgctggcgaacgtggtgctccaggc agccgcggtttccctggcgctgatggcatcgctggccccaagggtccccccggcgagcgt ggctcccccggccccgtcggccccaaaggatctcctggtgaagctggacgccccggggaa ccaggcctccccggtgccaagggtctgactggaagccccgggagccccggtcccgacggc aagactggcccccctggtcccgctggtcaagacggtcgccccggcccccccggccccccc ggggcaagaggtcaagctggtgtgatgggattccctggccccaaaggtgctgcgggtgag cccggcaaacctggcgagagaggtgctcctggtccccctggtgccgtgggtgctgctggc aaagacggtgaaactggtgcccaaggtcctcccggccccactggtcctgctggagaaaga ggtgaacaaggtcccgctggtgctcctggcttccagggtctgccaggccctgctggtccc cccggagaggctggcaagcctggtgagcagggtgtccctggagatgctggtgcccctggt cccgctggtgccaggggtgagagaggtttccctggtgaacgcggtgtccaaggccccccc ggtccccaaggtcctcgtggtgctaatggtgctcctggtaatgatggtgctaagggtgat gctggtgctcccggagcccccgggaaccaaggaccccccggtctgcagggtatgcccgga gaacgtggtgctgccggcctgccaggggccaagggtgacagaggtgacccaggtcccaaa ggtgctgacggtgctcctggcaaagacggtctccgaggtctgactggtcccatcggcccc cccggccctgctggtgctcctggtgacaagggggaagctggtccccccggtcctgctggt cccactggtgcccgtggtgctcccggtgaccgcggcgagcctggccctcctggtcctgct ggatttgctggcccccctggtgctgacggccagcctggtgctaaaggtgaaactggagat gctggagcgaagggtgatgctggtccccccggccctgctggccccactggtgctcctgga cctgctggtgctgttggtgctcctggtcccaaaggtgctcgtggaagcgctggaccccct ggtgctactggtttccctggtgctgctggacgagttggaccccccggcccctctgggaat atcggcctccccggcccccctggccccagcgggaaggaaggtggcaaaggaccccgtggt gagactggccctgctggccgccccggtgagccaggacctgctggaccccctggaccccct ggcgagaagggctctcctggtgctgatggccccattggtgctcctggcactcccggaccc caaggtatcgctggccagcgcggtgtcgttggtctccccggacagagaggagagagaggc ttccctgggctgcctggcccctctggtgaacctggcaaacaaggtccttctggttccccc ggtgagcgcggccctcctggccccatggggccccctggcctggctggaccccctggagaa gctggacgtgagggtgctcctggtgctgaaggtgcccctggccgtgatggtgctgctggt cctaagggtgaccgtggtgagaccggccctgctggcccccctggtgctcctggtgcccct ggtgctcccggccccgttggtcctgctggcaagaacggagatcgtggtgagactggtccc caaggtcctgctggtccccctggtcctgctggtgctcgtggtcctgctggcccacaaggt ccccgtggtgacaaaggtgaaaccggtgaacagggtgacagaggcatgaagggtcacaga ggcttctccggtctccagggcccacctggtcctcccggctctcctggtgaacaaggtcct tctggtgcttctggtcctgccggtccacgaggtcctcctggttccgctggtgctgctggc aaagatggtctcaatgggctgcccggccccatcggcccccccggcccccgtggtcgcact ggagatgtcggccctgctggtccccctggcccacccggccctcctggtcctcctggaccc cccagtggtggattcgacttcagcttcctgccccagccaccccaggagaaggcccacgac ggcgggcgctactacagggctgacgatgccaacgtgatgcgcgaccgtgacctggaggtg gacaccaccctcaagagcctgagtcaacagattgagaacatccgcagccctgagggcacc cgcaagaaccctgcccggacctgccgcgacctgaagatgtgccacggcgactggaagagc ggcgaatactggattgaccccaaccaaggctgcaacctggacgccatcaaggtctactgc aacatggagacgggtgagacgtgcgtctacccaacccaggccaccatcgcccagaagaac tggtacctcagcaagaacaccaaggagaagaagcacgtctggttcggcgagacgatgagc gatggcttccagtttgagtatggcggtgagggctccaaccccgccgacgttgccatccag ctgaccttcctgcgcctcatgtccaccgaagccgcccaaaacatcacctaccactgcaag aacagtgttgcctacatggatcaggacactggcaacctgaagaaggctcttctactccaa ggtgccaacgagatcgagatcagggctgaaggcaacagccgcttcacatacagcgtcacc gaggatggctgcacgagtcacaccggtgcatggggcaagacagtcatcgagtacaagacg acgaagacctctcgccttcccatcattgatttggctcctatggacgtcggcgctccagac caggaattcggcatcgacatcggccccgtctgcttcttgtaa

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