Empidonax traillii (willow flycatcher): 114069098
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Entry
114069098 CDS
T05887
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
etl04515
]
114069098
Cell adhesion molecules [BR:
etl04515
]
Immunoglobulin superfamily
DSCAM family
114069098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
Ig_4
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
C2-set_3
DUF6377
Adeno_E3_CR1
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
114069098
NCBI-ProteinID:
XP_027761454
LinkDB
All DBs
Position
Unknown
AA seq
1772 aa
AA seq
DB search
MAGQRVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGSYVCEVW
NNYGTAEMVGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINP
GNNVRITGVNRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEK
VVSPGEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQV
RDGGVYRCTANNSAGVVPYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIK
WYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVP
PFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRI
SNLSLMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGY
PVPTIVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADV
SKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYL
VSTKEVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREV
RARSIALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTKDVSPQLNQATIIDLHPSSTY
NIRMYAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGI
IRGYQIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSS
QEIITTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGE
LGEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVK
AAAASASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQ
YSVWVVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPT
VKWMKDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQV
QVPPDQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSY
RLETLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVKLNL
IGWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGC
AEKQAKFATLNYDGSTIPPLIKSVVQSEEGLATNEGLKMLVTISCILVGVLLLFVMLLVV
RRRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTME
TIDDRSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSA
KTGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDR
ARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTD
SLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQ
GTSRDLGLGQACLEPQKSRTLKRPTVLEPIPMEASSTRDAQSWQPGAVATLPQREGAELG
QAAKMSSSQESLLDSRGHLKGTNPYAKSYTLV
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggcaggacagcgagtggagctgccttgcaaagcatcagggcaccccgcaccaaagtac
cgctggctgaaggacaacgtcccctgggagcctgacagcaggttcaggcagacggtgacg
ggtctgctcatcgagaacacgcggccctcggactccgggagctacgtctgcgaggtgtgg
aacaactacggcaccgccgagatggtcgggaggctctacgtcaaacagccactgaaagcc
accatcagcccccggaaagtcaaaagcagcgtcggcagccaagtgtccctgtcctgcagc
gtgacggggaccgaggaccaggagctgtcctggtaccggaacggggaaatcatcaacccc
gggaacaacgtccggatcacgggagtcaaccgggagaacctcatcatggacggcatggcc
aagagcgacgggggagcttaccagtgcttcgtgcgcaaggacaagatgtctgcccaggac
tatgtccaggtggttctggaagatggaactcccaaaatcatctctgccttcagcgagaaa
gtggtgagcccgggagagccggtgtccctcatgtgcaacgtgaaggggactcccctgccc
accatcacctggactttggacgaagatcccattgtgaaggacggcagccaccggatcagc
cagatcatcacctctgagggcaacgtggtcagttacctgaacatctccaacactcaggtc
cgagacgggggcgtttatcgctgcacggccaacaactctgccggagtcgtcccgtaccag
gctcgaataaacgtaagagggccagccagcatcaggccgatgaagaacatcacggccatc
gctgggagggacacctacatccactgcagggtcatcgggtacccctactactccatcaag
tggtacaagaactccaacctgctcccgttcaaccatcgccaggtggcgtttgagaacaac
gggacgctgaagctctcggacgtgcagaaggaggtggacgagggggagtacacctgcaat
gtcctggttcagccccagctgtccaccagccagagcgtgcacgtgacggtgaaagtccca
cctttcatccagcccttcgagttcccgcggttctccatcgggcagagggtcttcattccc
tgcgtggtggtctccggggacctgcccatcaccatcacctggcagaaggacggcaggccc
atccccgccagcctcggcgtcaccatcgacaacatcgacttcaccagctccctgaggatc
tccaacctctccctgatgcacaacgggaattacacctgcatagccaggaacgacgcggcg
gccgtggagcaccagagccagctgatcgtgagagtgccccccaggtttgtggttcagccc
agcgaccaggatgggatctatggaaaagctgtaatcctcaactgctctgcagagggttat
cctgtccctaccattgtctggaagtactcaaaaggtgccggggttcctcagttccagccg
attgctctgaatggtcgtatccagcttctcacaaacggctccttgctgattaaacatgtg
ctggaagaagacagtggatactacctgtgcaaggtcagcaatgatgtgggagcagacgtc
agcaagtccatgtacctcactgttaaaattccagctatgatcacctcctacccaaacacc
accttggcaacacaaggacagaagaaggagatgagctgcacagcccatggggagaaaccc
atcatagtccgctgggagaaggaagaccgaatcatcaacccggagatgtcccgttacctt
gtttccaccaaggaagttggggatgaagtgatctctactctgcagattttgccaactgtg
cgtgaagattccggcttcttttcctgccacgccatcaattcctacggggaggatcgtggg
ataatccagctcactgtgcaagaaccccccgaccctcccgaaatagaaatccgagaggtg
agagcccgcagcatcgccctcaggtggaccatggggttcgacgggaacagccccatcacc
ggctacgacatcgagtgcaagaacaagtctgactcctgggattctgttcagagaaccaaa
gacgtttccccccagctgaaccaggccaccatcatcgacctgcacccttcctccacctac
aacatccgcatgtacgccaagaaccgcatcggcaagagcgaggccagcaacgagctcacc
atcaccacggatgaagcagctcctgatggcccccctcaggacgtccagctggagccaata
tcgtcacaaagcatccgggtcacctggaaggctccaaagaagcacttgcaaaatggaatt
atccgcgggtaccagatcggttaccgggagtacagcgcagggggaaacttccagttcaac
atcatcagcattgacaccaccggggacagcgaggtttatacactgaacaacctgaaaaaa
ttcacccagtatggcatggtggtccaggcttgtaacagggccgggataggaccttcttct
caggaaatcatcaccacaactcttgaggacgtgcccagttgccctccagggaacgtgcaa
gccactgccacgtcaccagaaaccatctctatttcttggtcaacgctggcaaaggaaacc
ctgaatgggatcctgcagggattcagggtcatctactgggccaacctcttggatggagag
ctgggagagataaagaatgtcaccaccacacagccatccctggagctggatggcctggaa
aaatacaccaactacagcatccaggtgttggcgtttacacgagccggggacggggtgagg
agcgaacagattttcacccgcactaaggaggatgttccaggtcctcccgctggcgttaaa
gcagccgcggcttcggcctccaccgtcttcgtgtcctggctccctcccctcaagctgaac
ggcatcattcggaaatacaccgtgttctgctcacacccctaccccacagtaatcagcgag
tttgaagcctctcccgactcattttcctacagaatccccaacctgagccggaatcggcag
tacagcgtctgggtggtggcagtgaccgccgcgggaagaggcaacagcagcgagatcatc
acggtggagccgctggctaaagctcctgccaggattttgaccttcagcggcacggtgacg
accccctggatgaaggacattgttctcccttgcaaagccgtgggggacccagctccaaca
gtcaagtggatgaaggatagtaacgggacacccagtctagtgatgattgatgggcgaagg
agcatcttcagcaacgggagctttgtcatccgaactgtgaaagcagaggactctggatac
tacagctgtgtggccagtaacaactggggatcagatgaaatcattttgaatttgcaggta
caagttccaccagaccagccaagactcactgtatccaaaaccacatcttcctctatcact
ctttcctggatacctggagacaacggtggcagttctattcgaggttacattttgcagtac
tctgaagataacagcgagcagtggggcagctttcccattagccccagtgagagatcctac
aggctggaaacgctgaaatgtggcacctggtacaagttcactctgactgcccagaacggg
gtggggccgggacgcatcagcgagatcatcgaggccaagacactgggaaaagagccacag
ttctccaaggaacaggagctctttgccagtatcaacaccacgcgagtgaagctgaacctg
ataggctggaatgacggtggctgccccatcacctccttcaccctggaataccggcccttc
gggacaacggtctggacaacggctcagaggacatccctgtccaagtcctacatcctgtat
gacctccaggaggcgacctggtatgagctgcagatgagagtgtgcaacagtgctggctgc
gcggagaaacaagccaaatttgcaacactcaattatgatggcagtacaatccctccactc
atcaagtcagttgtgcagagtgaggaagggctggcgaccaacgaagggctaaagatgctg
gtgaccatctcctgtatcttggttggggtcctgctgctcttcgtgatgctgctggtcgtg
aggaggaggaggagggagcagaggctgaagaggctgcgagatgcaaagagtttggctgaa
atgcttatgagcaagaacaccaggacgtcagatacacttaataaacagcagcaaacactg
aggatgcacatagacattcccagagcacaactgctgattgaggagagggacaccatggag
acaattgatgacagatcaacagttctgctcactgatgctgactttggagagacatccaag
cagaagtccctgactgtcacccacacagtccattaccagtccgtgtcacaagccacagga
ccactggtggatgtttctgatgcccggccaggaacaaatcccaccacgaggaggagcgcc
aaaaccggccccaccgcccgcaaccgctacgccagccagtggaccctcaacagacctcac
cccaccatatcagctcacaccctcaccacggactggaggctgcccacccccaggccagcg
gggtcagtggacaaggagagcgacagctacagcgtcagcccctcgcaggacacagatcgg
gcgaggagcagcatggtctccacggaaagtgcctcctcaacgtacgaagagctggccagg
gcgtacgagcacgccaagatggaagagcagctgagacacgccaagttcaccatcacagag
tgcttcatatcagacacctcctcggagcagctcacggcagggactaacgactacaccgac
agcctcacctccagcacgccgtcggagtcggggatctgcaggttcacagcgtcccccccc
aagcctcaggatggagggagggtgatgaacatggcagttccgaaggcacatcggccaggt
gatctcatgcatttgccaccctaccttaggatggactttttattgaaccgtggcgtgcag
ggcacgagcagagacctgggtttgggccaagcctgcctggagccccagaaaagccggacc
ttgaagcgccccaccgtcctggagccgatccccatggaggcatcctccacgagagatgct
cagtcatggcaacctggtgctgtggcaacgttacctcagcgagaaggagctgagctggga
caggcagcgaaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaa
ggaaccaacccctacgcaaaatcttacaccctggtataa
DBGET
integrated database retrieval system
