KEGG   Empidonax traillii (willow flycatcher): 114069240
Entry
114069240         CDS       T05887                                 
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114069240 (U2AF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:etl03041]
    114069240 (U2AF1)
Spliceosome [BR:etl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    114069240 (U2AF1)
 Complex B
    114069240 (U2AF1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 114069240
NCBI-ProteinID: XP_027762100
LinkDB
Position
Unknown
AA seq 234 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGRERDRRRSRDRERSGRF
NT seq 705 nt   +upstreamnt  +downstreamnt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaggtcaactgttcattt
tatttcaaaattggagcttgtcgccatggagacagatgttctcgattgcacaacaaacca
acatttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgttgagatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggagaaatacggtgaagttgaggagatgaac
gtgtgtgataaccttggagatcacctagttggaaatgtatacgtaaagtttcgccgtgaa
gaagatgcagaaaaggctgtgattgacctgaacaatcgctggttcaacgggcagcccatc
catgccgagctctcgcctgtgactgacttcagagaggcctgttgccgtcaatacgaaatg
ggagagtgtacacgaggaggtttctgcaacttcatgcatttgaagcccatctctcgagag
ttaagacgcgagttgtacgggcgtcgccgtaaaaagcatcggtccaggtcgaggtcccgt
gagcgacggtctagatccagagatcgcggccgcggcggcggcggaggaggccgcgagcgc
gacaggaggcggtcgcgagaccgcgaaagatccggtcggttctga

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