Empidonax traillii (willow flycatcher): 114069322
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Entry
114069322 CDS
T05887
Symbol
WHRN
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
etl03037
]
114069322 (WHRN)
Cilium and associated proteins [BR:
etl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
114069322 (WHRN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
CCM2_C
USH1C_N
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
114069322
NCBI-ProteinID:
XP_027761823
LinkDB
All DBs
Position
Unknown
AA seq
928 aa
AA seq
DB search
MSAELDGVSVHSSSSSSGSLGSAAGPAPRPLSANVRRLHQALTALLSEAERERFILCLNA
YHGRRNVCDLVRSLRALLDGPRRRQLLPLLRLVLPRSDQLLFDQYTAEGPYLPPPGRPPP
PPAPPPVIPGELRQVTLRRSKAHEGLGFSIRGGAEHGVGIYVSLVEPGSLAEREGLRVGD
QILGVNGKSLDRVTHAEAVKVLKGCKKLNLSVHSVGRIPGGYVTNHIYTWVDPQGRSVSP
PTGLPHHQNSSLRRDSEKRSHLQLLQEGDEKKVNLVLNEGKSLGLMIRGGAEYSLGIYIT
GVDKGSEAESTGLKVGDQILEVNGRSFLSIPHDEAVKLLKSSRHLIMTVKDIGRLPHART
TVDETRWISSSQLGETLVSSAGPVGNHAVEMAARPMFYRGLAGSQVTLSSMVNQTRVMLE
EQARHLLNEQERATMGYYLDEYKEGNISVDALVMALFELLNTHAKFSLLSEVRGVISPQD
LDRFDNLVLKREIESMKARQPSGPGAATDSYSMMSYSDTVSSSSSHFTATTVSSARERLL
WLIDLMENTSELEGAGDCHQSSINTLPDVSLDDISSFPEEPPNFKPPPPPAAPQLLDPSA
AQPRNPGKDKPKRPSSESSQSGLFFVAPRNPSPPPSAPEKDTVSVTSTATTSTEDSSPSA
IYATISPSLHGSRRQMDAQLSLVTQHPIGPFPRVQSPTRLKSPSPEAGGIRSPPSPSPPP
PPTHPAPPPPDKGSPQAVANQHFIMVEVHQPNSEPDVNEVRPLPQARASTLSQLSDSGQT
LSEDSGVDIGELESSGKDKSRQPGPGKSRSLKEAARSEGAAEGASKPPGLLEPTSCLIRV
SKSAPTLGIAIEGGANTRQPLPRIVTIQRGGSAHNCGKLKVGHVILEVNGTGLRGKEHRE
AARIIAEAFKLKDKDYIDFLVTEFNVAL
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggagctggacggcgtgtccgtgcactcctcgtcctcctcgtcgggctcgctg
ggctcggcggcgggtccggctccgcggccgctctcggcgaacgtgcggcggctgcaccag
gcgctcacggcgctgctgagcgaggcggagcgggagcgcttcatcctctgcctcaacgcc
taccacggccgccgcaacgtctgcgacctggtgcgctccctgcgcgccctcctcgacggg
ccccgccgccgccagctcctgccgctgctgcgcctcgtcctgccgcgctccgaccagctg
ctcttcgatcagtacacggccgaggggccctacctgccgccgcccggccgccccccgccg
cccccggccccgccgccggtgatccccggcgagctgcggcaggtgacgctgcgccggagc
aaagcccacgagggtctgggcttcagcatccgcggaggcgccgagcacggggtcgggatc
tacgtgtcgctggtggagccgggctcgctggccgagcgggaggggctgcgggtcggagac
cagatcctgggggtcaacggcaagtccctggacagggtgacccacgccgaggcggtcaag
gtgctgaagggctgcaagaagctgaacctgtcggtgcactccgtggggcgcatcccgggt
gggtacgtcaccaaccacatctacacgtgggtggacccccagggccgcagcgtgtccccc
cccacggggctgccccaccaccagaacagctccctgcgcagggacagtgagaagaggagc
cacctccagctcctgcaggagggggatgagaagaaggtgaacctggtcctgaacgaaggg
aaatccctgggcctcatgatccgaggaggggcagagtattccctgggcatctacatcacc
ggtgtggataagggatccgaggcagagagcactggcctgaaggtgggagaccagatcctg
gaggtgaacggcaggagcttcctgagcatcccccacgacgaggccgtgaagctgctcaag
tcctcgcggcacctcatcatgacggtgaaggacatcgggcgcctgccccacgcccgcacc
accgtggatgagacccggtggatcagcagctcccagcttggggagaccctcgtcagctca
gcggggccagtgggcaaccacgctgtggagatggcagccaggcccatgttttaccgaggg
ctggcgggctcccaggtgaccctgagcagcatggtgaaccagacccgggtgatgctggag
gagcaggcacggcacctgctcaacgagcaggagagggccaccatgggctactacctggac
gagtataaggagggcaacatctccgtggatgccctggtcatggccctcttcgagctgctc
aacacacacgccaagttctccctgctgtccgaggtgcggggggtgatctcccctcaggac
ctcgaccgcttcgacaacctggtgctgaagagggagatcgagtccatgaaggcccgacag
ccctcggggcccggcgccgccaccgactcctactccatgatgtcctacagcgacaccgtg
tcctcctccagcagccacttcactgccaccaccgtcagctctgcccgggagcggctcctg
tggctcatagacctgatggagaacacatcagaactggagggagctggggactgccaccaa
agcagcatcaacaccctgccagatgtgtccctggatgacatctcctccttcccagaggaa
ccacccaacttcaagcctcctcctcctcccgcagcccctcagttgctggacccctcagct
gcccagcccaggaacccggggaaggacaagcccaagcgtccctcctctgagtcctcccag
tcaggccttttcttcgtggccccccggaacccctcgccccctcccagcgctcccgagaag
gacacggtcagcgtgacctccaccgccaccacctccaccgaggattcctcccccagcgcc
atctacgccaccatctccccctccctgcacggctcccgcaggcagatggatgcccagctc
tccctggtcacccagcaccccatcgggcccttccccagggtccagtcccccaccaggttg
aagagcccgtccccggaggctggagggatccggagccccccgtccccatcccctcctcct
cctcccacccacccagcgccccctcccccggacaagggcagcccccaggccgtggccaac
cagcacttcatcatggtggaggtgcaccagcccaacagcgagcccgacgtcaacgaagtg
aggcccctgccccaggccagagcctccacgctctcccagctgtcggacagcgggcagacc
ctcagcgaggacagcggggtggacatcggggagctcgagagcagcggcaaggacaagagc
cggcagccgggccctgggaaaagccggagcctcaaggaggccgcgaggagcgagggggcg
gcagaaggggcctccaagccgccagggctcctggagcccacgtcgtgtctgatccgggtg
tccaagagcgctcccaccttgggcatcgccatcgagggcggagcgaacacgcggcagccg
ctgccccgcatcgtcaccatccagcgcggggggtcggcacacaactgtgggaagctgaag
gtgggccacgtcatcctggaggtgaacggcacagggctgcgaggcaaagagcaccgggag
gccgcccgcatcatcgctgaggccttcaagctgaaggacaaggactacattgacttcttg
gtcacagaattcaacgtggccctttag
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