Empidonax traillii (willow flycatcher): 114069634
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Entry
114069634 CDS
T05887
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114069634 (TRPC1)
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114069634 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Dsc3_C
MTR4-like_stalk
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
114069634
NCBI-ProteinID:
XP_027762370
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MAALYQSADPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPLLSLCYLLAP
KSRVGRMIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFTVNEEKDCAGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGRVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctgtaccagagcgcggacccgtccgcctcggcctcgcccaacaagctgctg
gcgctgaaggatgtgcggcaggtgaaggaggagaccacgctggacgagaagctttttctg
ctggcctgcgacaaaggtgactattacatggttaagaaactcttagaggaaaacagctca
ggggaaatgaacataaattgtgtggatgtgcttggacgaaatgctgttaccataaccatt
gaaaatgaaaacttggacatactacagctccttctggattatggctgccagtcatcggat
gcacttttggtggctattgactcggaagtggtgggagctgtggacattctcctgaatcac
cggcccaaaagatcctccagaccaaccattgtgaaactaatggaacgcatccagaacccg
gagtactcaacgaccatggacgtggcaccagtcattttagctgctcatcggaacaactac
gagattctcaccatgctgctaaagcaggacatatccttgcccaaaccacacgctgtaggc
tgtgaatgcaccctgtgcactgccaagaacaaaaaggatagtctgcgacattccaggttt
cgccttgacatctatcggtgcttggccagtcctgctttaatcatgttgacagaggaggat
ccaatcctacgagcttttgaacttagtgcagacttgaaagaattgagccttgttgaggtt
gaattcagaaatgattatgaggagctcgctcagcagtgcaaaacctttgctaaagatctg
cttgcacaagcacggaattcccgggagctggaggtgattctcaatcacacatccagcgac
gaacacgtagacaagcgaggattgttggaagagaggatgaacctaagccgcttaaaactt
gccatcaagtataatcaaaaagagtttgttgcccagtcaaactgccagcagttcctgaac
acggtgtggtttgggcagatggccggctatcgccgcaagcacacctgcaagaagatcctg
actgttctgatggttggcattttctggccacttctgtccctgtgttacttgttagctcct
aaatctcgagttggccgaatgattcacactccttttatgaagtttattattcatggagct
tcatatttcacgtttctcttactactcaatttgtactcccttgtctacaatgagaataag
aagaatacaatgggaccagccctcgagagaatagattatcttctgataatctggctaatt
ggaatggtgtggtcggacgtgaagagactgtggtatgagggtttagaagattttttagag
gaatcccgcaatcagcttagttttgtcatgaactccctgtatttggcaacgtttgccctc
aaagtggttgcccataacaagttccatgactatgctgaaaggaaggactgggatgcattc
catccgaccctggtggcagaagggctctttgcttttgcaaatgttctgagttacctgcgt
ctcttcttcatgtacacgaccagctctatcctggggccgctccagatttcaatggggcag
atgttgcaagattttggaaaattcctgggcatgtttcttcttgtcttgttctcattcaca
attggattgacacaactgtacgataaaggatttactgtaaatgaagaaaaggactgtgct
gggattttctgtgagcagcagagcaatgacacgtttcattcgttcattggcacgtgcttt
gctctgttctggtacatcttctccctggcacacgtggccatcttcgtcacacgtttcagc
tacggggaggaactgcagtccttcgtgggggctgttattgttggtacctacaacgtggtg
gtggtgatagtattaactaagctcctcgtggcaatgcttcataaaagttttcagctgata
gcaaatcacgaagacaaggagtggaagtttgctcgtgccaagctctggctcagctacttt
gatgacaaatgcacgctccccccacctttcaacgtcatcccctctcccaagaccatctgt
tacctcttcaacagtctcagtaaatggatctgctctcatacgtcaagtggcagagtgaaa
cgtcagaacagcctgaaggagtggagaaatctgaagcagaagagagacgagaattaccaa
aaggtgatgtgctgcttagtgcaccgttacttgacctccatgagacagaagatgcaaagt
acagatcaggcaacggtggaaaacctcaacgagctgcggcaagacctgtccaaattccgc
aacgagatgagagacctgctgggcttccgaacgtccaaatacgccatgttttatcccagg
aactga
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