Empidonax traillii (willow flycatcher): 114069651
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Entry
114069651 CDS
T05887
Name
(RefSeq) sodium channel protein type 3 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl04261
Adrenergic signaling in cardiomyocytes
etl04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
114069651
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
114069651
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etl04040
]
114069651
Ion channels [BR:
etl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
114069651
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HCMV_UL139
Motif
Other DBs
NCBI-GeneID:
114069651
NCBI-ProteinID:
XP_027762392
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MDIRSVEPSGDYIALSILIPTEGENIVLFTSIASSTGNKHSEGKMDDWSWSETTSFRLFT
PESLAAIEQRIAEKKKQLEKEKEKNKHQGVGKEQLTPQVDLQICKKLPSLYGDIPAELIG
EPLEDLDPYYSDHKTFMVLNKSRIIFRFTATPALWILGPFNRVRKAAIKILTNPYFAWFI
VCTVLLNCILLTVRKLPPELDWTEEAFAAIYTTEILIKIVATGFVWNEFTFLRDPWNCLD
LFIIIIMYITMFQDIGNVSALRTFRVLRTLKAISVIPGLKIIVNSLVESVKKLADALIFT
VFCLSIFALIGLQLFMGNLTSKCVLRNAMYNDCFCKDPKIYVPSDEGKYICYRMNGSSDI
LLCGFKYITTFTFSSQIIRTSGVSSFFFFMAVIFFCSFYLFNLILAVVTMAYEEQNRAER
EAKRKLLQDAQQIREKEQELAAGESSKVLQVGSEMPLADLKNSKGRESNKETPILGQNAI
SIDQKKKEEIFHSQPGHSHRELRQVLLSRDVSVDSINDPSRRQRLMSAAAILTDLSELQR
SKEKRLALWKRFVKKCLIWNCCPFWRAVKKKMKLVILYPFFDLFIMFCIILNTLFMAMEH
PDMPAYTIPLITISDDVFTLIFALEMILKIIALDPYYYFQNKWNVFDSFVVLIGLLTIGS
SFVPFRLIRIFKLAKYWPALNTLMKIILNSFGALSNLTLVLAITVFIFAVVGMQLLGSDY
ENKIHKISTSKTLRWHMMDFSHSVLTIFRILCGEWIEMMWECMEVAGKEECITIFLLVLV
IGNLVVLNLFIALLLSSFNTDASGGQEEPGEGNKCQIALARIYKGLKSVKDRILDPCGKK
MKGSLKKTDKKQTLVEISGTNLEDNNYAMTHVRKYIDNNGFDTEFHHNEENSSISWKYED
ISSSHSICVPIAAAESYSDQSDDEHIVFTETEQRKQKFDAACNFSEASTVDPAVGLEMFS
QTKNSHLPKDCFGEKCGKCFPCCVVDITKFPGRTWWNFRKTCYRIVNHSRFEYFMIFMIV
LSSAALAFEDIYLHKRDTLKMILDYADKIFIYIFLMEMLLKWVAYGLHSYFTNCWCLLDF
VIVCVSIIFMYQSVSPCSSRSGLKSLRTLRALRPLRALSRFEGIKVVVNALLGAIPSILN
VLLVCVVFWLLFNILGVKWFGRRFAKCILQEGDISLINNETDCITYGGNWTNYPVNFDNV
GIGYLALLQVATFKGWMEIMYAAVDSRGIYEQPQFEARLHMYIYFVVFVIFGSFFMLNLF
VGVVINNFNQQRKKISVKDLFLTEEQKKYYNALKKLGSKKPQKPIPRPSNAFLGLLFDIV
EHKAFDIVVVILICLNMVVMMAENNQGDTKEVLNKINYFFVAIFTAECVMKILALRQHYF
KSGWNLFDFSVVVLSIVSLGVSEAFKTFISPTLLRTIRLVRIGRILRLVRRARGIRTLLF
ALLMSLPALFNIGLLLFLIIFIYAIVGMENFAYLPWEGGIDNIFNFQTFSGSILCLFQIT
TSAGWDGLLAPLLRDSDLCAPNLGLTQSCKTNCINKTFGIFYFVSYVIISFLIVVNMYIA
VILENFNVATEESTDPLCEDDFDMFYETWGKFDPLATEFIDYSALSEFADALAEPLRIPK
PNNIQLLSMDLPLVSGDKIHCLDILLAFSKRVLGECGDFDRLKLLIEEKFVAANPSKFSH
RPISSTFKRKQEEVSAVIIQRAFRRYLLQRSFKNTSFFRRRRHNSAVFGEEAREKQRLIV
SMFNESSGRKIHKPRSVSSTSLPLLYDATAETKRLDI
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atggacatacggagtgtggaaccaagtggagactacattgccctctccattctgatccca
acagagggggagaacattgtgctttttacttcaattgcctctagcactggaaacaaacat
tcagaaggaaaaatggatgactggtcttggtcagaaacgaccagctttcgacttttcacc
cctgagtccttggcagcaattgagcaaagaattgctgagaaaaaaaagcagttagagaaa
gaaaaagagaagaataagcaccaaggagttggaaaagaacaacttactccccaggttgat
ctgcaaatctgcaaaaagctgccatctctttatggggacattccagcagagctcattggg
gaacccctggaggatttggatccatactacagtgatcacaagacttttatggtgctaaat
aaaagcaggattattttccggtttactgccacacctgccttgtggatattgggtcctttt
aatcgagtcagaaaagcagccattaaaattctgaccaatccatattttgcttggtttatt
gtatgtactgtgttactcaattgtattctactgactgtacgtaagcttccaccagaactc
gactggactgaagaagcttttgctgccatatatactactgaaatattgataaaaatagta
gcaacaggatttgtttggaatgaatttacctttcttcgagatccgtggaactgcttggat
ctttttattattatcataatgtatattaccatgtttcaagatataggcaatgtttcagct
cttcgaactttcagagtactgaggactttgaaagccatttcagtaataccaggtctgaaa
atcatcgtaaattcacttgttgaatctgttaagaaacttgctgatgcattgatcttcact
gtattttgcttgagtatatttgctctgataggccttcagctttttatgggcaatttaaca
tccaaatgtgtcctcaggaatgctatgtacaatgactgcttctgtaaggatcccaagatc
tatgtaccaagtgatgaaggtaaatatatctgctacagaatgaatggctcttctgacata
ttgctctgtgggttcaaatatatcacaacatttaccttttcctcacagattatccgtaca
tctggagtgtccagcttttttttttttatggcagtcatctttttctgctcattttatctc
ttcaatctgatcttggctgtggtaacaatggcatatgaagagcaaaacagagctgaaaga
gaggccaagagaaaactacttcaggatgctcaacaaattagagagaaagaacaggagctg
gctgcaggagaaagcagtaaggtcttgcaggttggatctgaaatgccacttgctgacttg
aaaaattcaaaaggaagagagagtaataaggaaacacctattttaggacaaaatgcaatt
tccattgaccagaagaaaaaggaggaaatatttcattcacagcctggtcacagccacagg
gagcttaggcaggtcctgctgtctcgtgatgtgtcagtggactctattaatgatccttca
cgaagacagaggttaatgagtgcagctgctattcttacagatctttcagaacttcaaagg
tcaaaagagaaacgtcttgcattgtggaaacgttttgtaaaaaagtgcttaatttggaat
tgttgtccattctggagagcagtcaaaaagaagatgaaattggtgattttgtatccattt
tttgatctctttatcatgttttgcattatcttgaataccttatttatggctatggagcac
cctgacatgccagcatataccataccactgattactataagtgacgatgtcttcaccctg
atttttgcactagaaatgatcttgaaaatcattgctctagatccctactactattttcag
aacaagtggaatgtttttgatagcttcgttgttttgattggcctactgaccattggatcc
agttttgtacctttccggctgatcagaatattcaaattggcaaagtactggccagccttg
aatactcttatgaaaataattctgaactcatttggtgctctgagtaacctcactctggtt
ttggctatcaccgtatttatttttgctgtagtaggaatgcagcttctgggcagtgattat
gaaaacaaaatccataaaataagcaccagtaaaaccttacgctggcatatgatggatttc
agtcattcagtcctgactatattccgaatattatgtggagaatggattgaaatgatgtgg
gaatgtatggaagtggctggaaaagaggaatgtattaccattttcttgctagtcctggtg
ataggaaacctggtggtgctcaacttgttcattgccttgctgctgagttccttcaatact
gacgcctcagggggacaagaggaacctggagaagggaataaatgtcagattgcccttgca
cggatttacaagggcctgaagtctgtgaaagacagaattctggatccttgtggcaaaaaa
atgaaaggaagcctcaaaaagacagacaaaaagcagactttagtagaaatttctggcaca
aacctagaggataataattatgccatgacacatgtcagaaaatatatagacaacaatggc
tttgacacagagtttcaccataatgaagagaattcctcgatatcatggaaatatgaagac
atttccagcagtcacagtatctgtgttcccattgcagcagcagagagttacagtgaccaa
agtgatgatgagcacattgtattcacagaaacagaacagagaaagcagaaatttgatgct
gcctgtaacttttctgaagccagcactgtggatccagctgttggtctggagatgttttcc
cagactaaaaactcacacctgcctaaggactgttttggagaaaagtgtggtaaatgtttc
ccatgttgtgtagtggatatcactaagtttccaggcagaacttggtggaacttcaggaaa
acctgctacagaattgttaatcacagcagatttgaatattttatgatttttatgatagta
ttgagcagcgcagcactggcatttgaagatatttacctgcacaagagagatacactgaaa
atgatcctagattatgctgacaaaatatttatctacatctttttgatggagatgcttctg
aaatgggtagcttatggattgcacagttacttcacaaattgctggtgtttgcttgacttt
gtcattgtatgtgtaagtattatattcatgtatcagagtgtatcaccttgttcctccagg
agtggcctgaaatctctcaggactcttagggcattgaggcctctacgagctttgtcaaga
tttgaagggataaaggttgttgtcaatgcactcctcggagctatcccctcaatcctcaat
gttttgctcgtctgtgttgtcttttggctcctatttaacattctaggagtaaaatggttt
gggagaagatttgcaaaatgcatactccaagaaggagatatcagtctcattaataacgaa
actgattgtattacctatggtggaaattggacaaattatcctgtaaactttgataatgtt
gggataggatacttggctctgctccaagtggcaacttttaaaggttggatggagattatg
tatgcagcagtggattcacgtgggatctatgaacagccacagtttgaagcacgcttacac
atgtatatatactttgtggttttcgttatttttggatctttcttcatgctgaaccttttt
gttggagtggttatcaacaattttaaccaacaaaggaaaaagataagtgtaaaagatcta
tttctgactgaggaacagaaaaagtactataatgccttaaaaaagcttggatccaagaaa
cctcaaaaacccatcccaagaccatcgaatgcattcctgggattgctgtttgatatcgta
gagcacaaagcatttgacatcgtcgttgtgattttgatctgcctaaacatggttgttatg
atggcagaaaataaccagggagacaccaaggaagttcttaataaaatcaattattttttt
gtggctatatttactgcggaatgtgtcatgaaaatactggccttaagacagcactacttc
aaaagcggctggaacttatttgattttagtgttgtggtcctttcaatagtcagtcttgga
gtttctgaagcgttcaaaacgttcatctctcctacacttttgagaaccattcgtttggtg
cgaattggccgaatcctgagattggttcgaagagcgagaggaattcgaacccttctgttt
gcattactgatgtctcttcctgcactgttcaacattggccttttgcttttcctgattata
ttcatttatgccattgtgggcatggaaaactttgcctatcttccctgggaaggtgggatt
gataacattttcaatttccaaaccttttctggtagcattctctgtctcttccaaattaca
acatcagctggctgggatggtcttctggcccctttgttaagggactctgatttgtgtgct
cccaacttaggtttaacacagtcatgtaaaaccaattgcataaataaaacatttggtatt
ttctattttgtaagctatgtcattatatcatttctcattgttgtaaatatgtacatagct
gtcattttagagaacttcaatgttgccactgaagaaagcacagatcctctttgtgaggat
gactttgatatgttttatgaaacatggggaaaatttgatcctctggcaacagagtttatt
gactattctgccctttcagagtttgcagatgctctggcagaacctttgcgcattccaaag
cctaataacatccagctcctatccatggacctccctctagtgagtggagataagatccac
tgcttggatatcttgctggctttcagtaaacgagtcttgggagaatgtggagattttgat
agacttaaattactcattgaagaaaaatttgtggctgccaatccatctaaattttctcac
aggccaatttcttctacatttaaaagaaaacaagaggaggtatcagcagttattatccaa
agggccttcaggaggtatttgttacagcgttctttcaaaaatacatctttctttcgccgt
cgcagacataacagtgctgtttttggagaagaagcacgggagaagcaaaggcttattgta
tcaatgtttaatgaaagtagtggcaggaagatacataaaccacggtctgtttcttccaca
tctctccccttgctttacgatgctactgctgaaacaaaaaggctggacatataa
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integrated database retrieval system
