Empidonax traillii (willow flycatcher): 114069713
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Entry
114069713 CDS
T05887
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03082
ATP-dependent chromatin remodeling
etl03083
Polycomb repressive complex
etl04110
Cell cycle
etl04330
Notch signaling pathway
etl04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114069713 (HDAC1)
03083 Polycomb repressive complex
114069713 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114069713 (HDAC1)
04350 TGF-beta signaling pathway
114069713 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114069713 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etl03036
]
114069713 (HDAC1)
Enzymes [BR:
etl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114069713 (HDAC1)
Chromosome and associated proteins [BR:
etl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114069713 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
114069713 (HDAC1)
BRAF-HDAC complex
114069713 (HDAC1)
REST complex
114069713 (HDAC1)
SHIP complex
114069713 (HDAC1)
MiDAC complex
114069713 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114069713 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
114069713 (HDAC1)
Chromatin remodeling factors
NuRD complex
114069713 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Peptidase_C101
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
114069713
NCBI-ProteinID:
XP_027762496
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRCELGLQVPAEVTKKHPPHPGSGESEAN
RGGNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK
QRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEFSDS
EDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKDEKEEEKVKEEKAEPKGAKEEPKST
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacgcaggggacgaagcgcaaagtctgctactactacgatggtgacgttggg
aactactattatggccagggacatcccatgaaaccccacaggatccggatgacccacaac
ctgctgctgaactacggcctctacaggaagatggagatctatcgtcctcacaaggcgaac
gcagaggagatgaccaagtaccacagcgacgactacatcaagttcctgaggtccatccgc
ccggacaacatgtctgagtacagcaagcagatgcagagatgtgagttggggctgcaggtc
cctgccgaggttacaaaaaaacaccctccccaccctggatctggggaatctgaggccaat
cgtggagggaacgtggccaggtgctggacctatgagactgccgtggctttggacaccgaa
attcccaatgagctcccctataacgactattttgagtacttcgggccagacttcaagctc
cacatcagcccctccaacatgaccaaccagaacaccaacgagtacctcgagaagatcaag
cagcgcctcttcgagaacctgcgcatgctcccccacgcccccggggtgcagatgcagccc
attcccgaggatgctgtgcaggaggacagcggagatgaagaggaagatgaccctgagaaa
cgcatctcaatccgcaattccaacaagaggatatcctgcgatgaggaattctctgactcc
gaggacgaaggggaaggggggcgcaaaaacgtcgccaacttcaagaaagccaagcgtgtg
aaggcagaggaggagaaggaggaggaggagaaaaaagacgagaaggaagaggaaaaagtg
aaagaggagaaagcagaacccaaaggggcgaaggaagagccaaaatccacctga
DBGET
integrated database retrieval system