KEGG   Empidonax traillii (willow flycatcher): 114069713
Entry
114069713         CDS       T05887                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
etl  Empidonax traillii (willow flycatcher)
Pathway
etl03082  ATP-dependent chromatin remodeling
etl03083  Polycomb repressive complex
etl04110  Cell cycle
etl04330  Notch signaling pathway
etl04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:etl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114069713 (HDAC1)
   03083 Polycomb repressive complex
    114069713 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    114069713 (HDAC1)
   04350 TGF-beta signaling pathway
    114069713 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    114069713 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:etl03036]
    114069713 (HDAC1)
Enzymes [BR:etl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114069713 (HDAC1)
Chromosome and associated proteins [BR:etl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114069713 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     114069713 (HDAC1)
    BRAF-HDAC complex
     114069713 (HDAC1)
    REST complex
     114069713 (HDAC1)
    SHIP complex
     114069713 (HDAC1)
    MiDAC complex
     114069713 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114069713 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114069713 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    114069713 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl Peptidase_C101 RNA_polI_A34
Other DBs
NCBI-GeneID: 114069713
NCBI-ProteinID: XP_027762496
LinkDB
Position
Unknown
AA seq 297 aa
MALTQGTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAN
AEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRCELGLQVPAEVTKKHPPHPGSGESEAN
RGGNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK
QRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEFSDS
EDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKDEKEEEKVKEEKAEPKGAKEEPKST
NT seq 894 nt   +upstreamnt  +downstreamnt
atggcgctgacgcaggggacgaagcgcaaagtctgctactactacgatggtgacgttggg
aactactattatggccagggacatcccatgaaaccccacaggatccggatgacccacaac
ctgctgctgaactacggcctctacaggaagatggagatctatcgtcctcacaaggcgaac
gcagaggagatgaccaagtaccacagcgacgactacatcaagttcctgaggtccatccgc
ccggacaacatgtctgagtacagcaagcagatgcagagatgtgagttggggctgcaggtc
cctgccgaggttacaaaaaaacaccctccccaccctggatctggggaatctgaggccaat
cgtggagggaacgtggccaggtgctggacctatgagactgccgtggctttggacaccgaa
attcccaatgagctcccctataacgactattttgagtacttcgggccagacttcaagctc
cacatcagcccctccaacatgaccaaccagaacaccaacgagtacctcgagaagatcaag
cagcgcctcttcgagaacctgcgcatgctcccccacgcccccggggtgcagatgcagccc
attcccgaggatgctgtgcaggaggacagcggagatgaagaggaagatgaccctgagaaa
cgcatctcaatccgcaattccaacaagaggatatcctgcgatgaggaattctctgactcc
gaggacgaaggggaaggggggcgcaaaaacgtcgccaacttcaagaaagccaagcgtgtg
aaggcagaggaggagaaggaggaggaggagaaaaaagacgagaaggaagaggaaaaagtg
aaagaggagaaagcagaacccaaaggggcgaaggaagagccaaaatccacctga

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