Empidonax traillii (willow flycatcher): 114069716
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Entry
114069716 CDS
T05887
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
etl
Empidonax traillii (willow flycatcher)
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etl03021
]
114069716 (TAF1C)
Transcription machinery [BR:
etl03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
114069716 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
114069716
NCBI-ProteinID:
XP_027762504
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MGRLLHKNFYLGNSKLKRPARSSTIRMTTLMKDIDRLEARRGCHRQHLASRLRWFSHLCR
DWLFEVPLGLLADCLHEELLLQWSDLLFDDSLTGGALAWLPPGDTGSRTGRLVYPGGQAM
NHLFFQDMVLEELPRARGSPAQFELSGRIRQVAAARVDGEDFVGVCSDYHCGVWRVPGRT
GTAPTPLQVIRTDVPASCLTVSPHLPGELAVCTQSGTVYLWSVETGLQQLRHDAQTMFFR
DHSPWRWSDFTAHPRVLSCADRTGLQCLDARAPKKCHFDLFKVGEEAGCQQGERVVLPMY
LGRAHPSQYLVTTQFSVYVLDERLPLVPVLKWAHMMKAPPLFAHLMPGDPGRTHKVLLGA
SRTQELLLLQYRGGSQSACQLAGAPQKLHSIAGCLQHLPTQLPHHHHLLQQRLGAPAAGL
AATLQGDGTCETMLVFQLSEAGDVFCQRLTHEAAHPPLPTSRDEATTAPGSSPLFEAPAS
SPLGLGSEEEEEEEQTFYLSNLEVIINEEEENTGTPAPPEEAELPQEPCASPQPNPAVPS
PAAALRYHRWLRALFRGCREPPQNSLPPSLSQRRLFTRKELEGPTGPTALQRQVRQWLRQ
VMREGGHIQHWEPVALHTPPLPQPLEPEGDLDHLSTRLRAAWSGDWEQWWEDRTSFSVAQ
RQRALRERRRRQKRARGRRSLSASFTSSLTYQSELSELSDAGPPLLSPGRPHILSQEGSP
SASSPLPGSPPASPAPDEALLSSQSLHSRGIPKERRKTLRDYLSVWAEVPPEPPELPGSQ
ASQLCIPSSQSQLSSASQTRRKRPRMGF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctgctgcacaagaacttctacctaggcaactccaaactgaagaggccggcc
cggagcagcaccatccggatgacgaccctcatgaaggacattgaccgcctggaggcccgg
cgtggctgccaccggcagcacttggcctcccgcctgcgctggttctcccacctgtgccgt
gactggctctttgaggtgccactggggctgctggcagactgcctgcacgaggagctgctg
ctgcagtggtctgacctgctcttcgacgacagcctcacagggggggcgctggcctggctg
ccccctggcgacacagggtcacgcaccggccgcctggtgtaccctggagggcaggccatg
aaccacctctttttccaggacatggtgctggaggagctgccccgcgcccggggctccccg
gcgcagtttgaactcagtgggcgcatccggcaggtggctgcagcccgggtggatggcgaa
gattttgttggggtctgctcagactatcactgcggagtttggagggtgccaggcaggaca
gggacagctcccaccccgctgcaggtcatccgtactgatgtgcctgcctcctgcctcact
gtcagccctcacctccctggggagctagcagtctgcactcagagtgggaccgtctacctc
tggagcgtcgagacagggctgcagcagctccgccatgacgcccagaccatgttttttcgg
gaccattccccctggcggtggagcgacttcactgcccacccacgggtgctgagctgcgcc
gaccgcaccggcctgcagtgcctggatgcccgggcccccaagaaatgccacttcgacttg
ttcaaggtgggcgaggaagccggctgccagcagggcgagcgcgtggtgctgcccatgtac
ctgggcagggctcacccctcacagtaccttgtcaccacccagttctccgtgtacgtgctg
gacgagcggttgccgctggtgcctgtgctgaagtgggcacacatgatgaaggcccctccg
ctctttgcccacctgatgccaggggatcctgggaggacccataaggtgctgctcggcgca
tcccgcacccaggaactgttgctgctgcaataccgggggggcagccagtcggcctgccag
ctggcaggggctccacagaagctgcacagcatcgccgggtgcctgcagcacctgcccacc
cagcttccacaccaccaccacctgctccagcagcgcctcggagccccggctgcagggctg
gctgccacattgcagggggatgggacgtgcgagaccatgctggttttccagctgtccgag
gctggggatgtcttctgccagaggctgacccacgaggcagcacatccccctttacccacc
tcgagggatgaggccacaacagcccctggctcttcccctctcttcgaggctcctgccagc
agcccactgggcttgggcagtgaggaagaagaggaggaagagcaaacgttctacttgtcc
aacctggaggtgattatcaacgaggaggaggagaacacaggcacaccagcacccccagag
gaagctgaactacctcaggagccctgtgccagcccccagcccaacccagctgtgcccagc
ccagctgcagccctgcgttaccaccgctggttgagggctcttttcagaggctgcagggag
cccccccagaactccttgccccccagcctcagccagaggcgcctcttcacccgcaaagag
ctggaggggccaacaggtcccactgccctgcagaggcaggtgcggcagtggctgcgccag
gtcatgcgggaagggggccacatccagcactgggagcctgtggccctccatacccctccc
ctgccgcagcccctggagccagagggggatctggaccatctgagcacccgtctgagagca
gcctggtctggggactgggagcagtggtgggaggacaggacgagcttcagcgtggcacag
agacagcgggcgctgcgggagcggcggcggcggcagaaacgagcacggggccggcgcagc
ctctcggccagttttacgtcctccctcacctaccagtcggagctgtctgagctcagtgat
gcaggacccccgctgctctcccctggccgcccacacattctctcccaggagggctccccc
tcagccagcagccccctacccggcagccccccagcctcgccagcacccgatgaagccctg
ctgtcctcgcagagcctgcacagccgcggcatccccaaggagcggcggaagacgctgcgg
gactacctgtcggtgtgggctgaggtgccccctgagcccccagagctccctggcagccag
gccagccagctctgcatcccctcctcccagagccagctctcttctgcctcgcagacccgc
cgcaagcggccgcgcatgggcttctga
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