Empidonax traillii (willow flycatcher): 114069732
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Entry
114069732 CDS
T05887
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-1-like
KO
K18752
transportin-1
Organism
etl
Empidonax traillii (willow flycatcher)
Pathway
etl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
etl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114069732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etl03019
]
114069732
03009 Ribosome biogenesis [BR:
etl03009
]
114069732
Messenger RNA biogenesis [BR:
etl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114069732
Ribosome biogenesis [BR:
etl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114069732
Pre-60S particles
114069732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
Arm
HEAT_2
TPR_IPO5
Cnd1
TOR1L1_N
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
Adaptin_N
MMS19_C
IBN_N
PDS5
HEAT_GCN1_C_2
HEAT_GCN1_C
ARM_TBCD
INTS7_N
Dopey_N
HEAT_MROH2B_1st
CandA_N
RTP1_C1
TPR_TTI1_C
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
114069732
NCBI-ProteinID:
XP_027762537
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MNEPTRSLSGLILKNNVKAHFHNFPNGVADFIKSECLNNIGDSSSLIRATVGILITTIAS
KGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNVMIPKF
LQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVLKNVCRAL
VMLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLCRHLTK
LIPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHEEDHIEDDDD
DNDLDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMVPYLPELIPHLIQCLSNKKALVRSITCWTLSRYAHWVVSQPPDTHLKP
LMTELLKCILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMVFFYCYSSVFRISPXTNVLTISETLHNAQPDQYEAP
DKDFMIVALDLLSGLAEGLGGNIEQLVACSNILTLMYQCMQDKMPEVRQSSFALLGDLTK
ACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLAE
IINRPNTPKTLLENTAITIGRLGFVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRG
ICTMISVNPSGVVQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWKRFSDQF
PLPLKERLAAYYGV
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagccaacacgttccttgagtggtctcatcttgaagaataatgttaaagcacat
tttcacaactttccaaatggggtagccgacttcattaaaagtgaatgtttgaacaacatt
ggtgattcctcctccttaattagagctactgttggcattctgataacaaccattgcttca
aaaggggaattacagaattggcctgacctcttaccaaagctttgcagcctgttggattct
gaagattataatacctgtgagggtgcatttggtgctcttcagaagatatgtgaagactct
gctgaaattttagatagtgatgtattggaccgaccactcaatgtcatgatacctaaattc
ttgcagttcttcaaacacagcagtccaaaaataaggtctcatgctgttgcgtgtgtcaat
caattcatcatcagcagaactcaagctcttatgttgcacatagattcttttattgagaat
ctttttgcactggctggtgatgaggagcctgaagtactcaaaaatgtttgtcgtgctctg
gtaatgttgctggaagttcgaatggatcgtctgcttcctcatatgattagtatagttgag
tatatgcttcaaaggacccaggaccaagatgaaaatgttgctttggaggcttgcgaattt
tggctgactttggctgaacaaccaatttgtaaagatgtattatgtcgacatcttactaaa
ctgatacctgtgctggtaaatggtatgaagtattcagagattgatattattctgttaaag
ggggatgttgaagaagatgaagctattccagatagtgaacaggacataagacctcgtttt
catcgttcacggacagtagctcagcaacatgaagaagatcatattgaagatgatgatgat
gacaatgatcttgatgatgatgatactatttctgactggaatttaaggaaatgttctgct
gctgctcttgatgtcctggctaatgtatttcgtgatgaacttctgccacacatcttgccc
cttttgaaggaattgcttttccatcccgaatgggtagttaaagaatctggtatccttgtt
cttggagcaattgctgaaggctgcatgcagggtatggttccatatcttcctgagctgatc
cctcaccttattcagtgcctttctaataaaaaggctcttgtgcgctccattacttgctgg
actcttagtcgctatgcacactgggtagttagtcaacccccagacacacacttgaagcca
ttaatgactgagttgctaaagtgcattctggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagagcttgttccttatcttgca
tatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgctcatt
ctttatgatgctataggaactctagcagattctgtaggacatcatctaaataaaccagaa
tatattcagatgctaatgcctccattaatccagaagtggaacatgttgaaggatgaagat
aaagatctcttccctttattagagtgcctgtcgtcagttgctactgccttgcaatctggc
tttcttccgtattgtgagcctgtgtaccagcgttgtgtaaatctggtgcagaagactctt
gcacaagccatggtatttttctattgctattccagtgttttcagaatatctccttaaacc
aatgtattaactatttctgaaactctgcacaatgctcaaccagaccaatatgaggctcca
gataaagatttcatgattgtggctcttgatttactgagtggtttagctgaaggacttgga
ggtaacattgaacagctagtggcttgcagcaatatcctgacgctaatgtaccaatgcatg
caggataaaatgcctgaggtacggcagagttcttttgcgttgttaggtgatctgacaaag
gcgtgttttcagcatgttaagccttgcatcgctgatttcatgcccattttgggaacaaat
ctaaaccctgaattcatttctgtgtgtaacaatgcaacctgggcaattggagaaatctcc
atccagatgggtatagagatgcagccttatattccaatggtgttgcaccagcttgcagaa
ataattaacagacccaacacaccaaagacattgttagagaacacagcaataacaattggt
cgtcttggtttcgtttgtcctcaagaggtggcccccatgctacagcagtttataagaccc
tggtgcacctctctgcgaaacataagagacaatgaggaaaaggattcagcattccgtggg
atatgtaccatgatctcagtcaaccccagtggagtagtccaagactttattttcttttgt
gatgctgttgcatcatggattaacccaaaagatgatctccgagacatgttctgtaagatt
cttcatggatttaaaaatcaagttggagatgagaattggaagcgtttctctgaccagttt
cctcttcccttaaaagagcgccttgcagcttattatggagtttaa
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